Molecular Target Synopsis
Domains and Structures
Drugs and Clinical Candidates
Ligand Efficiency Plot
Family Cladogram
Interaction Network
Gene Expression
Gene Copy Number Variation
Germline Genetics

RYK (P34925) - Overview - Molecular Target Synopsis


RYK, Tyrosine-protein kinase RYK
Enzyme Classification
UniProt P34925

Also Known as RYK_HUMAN, RYK, JTK5A

May be a coreceptor along with FZD8 of Wnt proteins, such as WNT1, WNT3, WNT3A and WNT5A. Involved in neuron differentiation, axon guidance, corpus callosum establishment and neurite outgrowth. In response to WNT3 stimulation, receptor C-terminal cleavage occurs in its transmembrane region and allows the C-terminal intracellular product to translocate from the cytoplasm to the nucleus where it plays a crucial role in neuronal development. Interacts with DVL1 (via PDZ domain).

Isoforms / Transcripts (Protein Coding)

Protein Length Ensembl Gene Ensembl Transcript Ensembl Protein Uniprot Isoform

Sub-cellular localization

UniProt: RYK is active in the following subcellular-locations: cytoplasm, membrane, nucleus.
GO terms: RYK is active in the following subcellular-locations: cytoplasm, integral component of membrane, integral component of plasma membrane, membrane, nucleus, plasma membrane, receptor complex.

GO terms

Gene Copy Number Variation

In COSMIC - Cell Lines Project RYK has gain in 0 cell-lines, loss in 0 cell-lines and no signal in 0 cell-lines. (see details)

Gene Expression

In NCI60, the highest expressing cell lines are: HS578T, OVCAR_3, MDA_N

In Array Express (RNA-seq of 675 commonly used human cancer cell lines), the highest expressing cell lines are: NIH:OVCAR-3, HCC38, SNU-216

In Array Express (RNA-seq of long poly adenylated RNA and long non poly adenylated RNA from ENCODE cell lines), the highest expressing cell lines are: NHLF, HMEC, HSMM

(see details)

3D Structures

At greater than 35% identity similarity to RYK there are:
150 structures (236 chains) solved
135 are solved in complex with at least one small molecule ligand
4 are solved with an approved drug

RYK is solved in complex with the approved drug(s):

0LI/PONATINIB (4V01_A, 4V01_B, 4V04_A, 4V04_B),

(see details)
Molecular Target 3D Synopsis

Screening and Chemistry

RYK has been screened with compounds ( bioactivities). (see details)