Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

SW 48 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 2.05
Chromosome Average Copy Number: 2

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
5155331807903212no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000249449MRP63P62no signal51624662971624666051
ENSG00000038274MAT2B2no signal51629301201629463421
ENSG000002540662no signal5164647583164668758-1
ENSG000002240122no signal5163136216163136520-1
ENSG00000254252RPL7P202no signal5165455572165456316-1
ENSG00000168269FOXI12no signal51695329011695367271
ENSG000002532692no signal5169199970169206369-1
ENSG00000182132KCNIP12no signal51697804911701636361
ENSG00000265160MIR50032no signal51720891681720892661
ENSG00000174705SH3PXD2B2no signal5171752185171881527-1
ENSG000002534452no signal5172117457172124723-1
ENSG000002072102no signal5172479455172479558-1
ENSG00000212402SNORA74B2no signal51724477311724479311
ENSG000002539552no signal51730066461730120711
ENSG000001700912no signal51734726071736705041
ENSG00000185056C5orf472no signal51734007821734331431
ENSG00000248929HIGD1AP32no signal51740599351740602121
ENSG000002511442no signal51742470301742533271
ENSG00000248355ARL2BPP62no signal51747177341747182551
ENSG000002482932no signal51743535441743537201
ENSG00000170085SIMC12no signal51756653651757729941
ENSG00000146066HIGD2A2no signal51758157481758167721
ENSG00000122203KIAA11912no signal5175773064175788971-1
ENSG00000074276CDHR22no signal51759695121760229751
ENSG000001700892no signal51772364081773777331
ENSG00000169223LMAN22no signal5176758563176778853-1
ENSG00000204677FAM153C2no signal51774334061774825601
ENSG000002539792no signal51788045061788058661
ENSG00000177932ZNF354C2no signal51784874161785105381
ENSG00000249140PRDX2P32no signal51789991571789997421
ENSG00000169045HNRNPH12no signal5179041179179061785-1
ENSG000002449452no signal5179022905179030742-1
ENSG00000204661C5orf602no signal5179068545179072047-1
ENSG000002282592no signal51790782981790794451
ENSG000002513522no signal5180098892180099598-1
ENSG00000050748MAPK92no signal5179660143179719099-1
ENSG00000206686RNU6-1036P2no signal51804342811804343841
ENSG00000248275TRIM52-AS12no signal51806882131806993081
ENSG000002502222no signal51806189241806214291
ENSG00000112983BRD82no signal5137475455137514675-1
ENSG00000120733KDM3B2no signal51376882851377727171
ENSG000002387452no signal51379591681379592711
ENSG000002321292no signal51378878501378880501
ENSG000002426832no signal5138370837138371676-1
ENSG000002690712no signal51388521081388525061
ENSG00000170469SPATA242no signal5138732252138739777-1
ENSG000002496892no signal51388721231388726901
ENSG00000146005PSD22no signal51391754061392240511
ENSG000002070202no signal5138934485138934586-1
ENSG00000120306CYSTM12no signal51395542271396616371
ENSG00000112855HARS22no signal51400710111400788891
ENSG00000222790RNU4-14P2no signal5139776908139777029-1
ENSG00000204965PCDHA52no signal51402012221403919291
ENSG00000171815PCDHB12no signal51404309791404335121
ENSG00000113211PCDHB62no signal51405296831405328681
ENSG00000113209PCDHB52no signal51405148001405177031
ENSG00000196963PCDHB162no signal51405609801405657931
ENSG00000197948FCHSD12no signal5141018869141030986-1
ENSG00000254221PCDHGB12no signal51407298281408925461
ENSG00000113552GNPDA12no signal5141371314141392606-1
ENSG00000113580NR3C12no signal5142657496142815077-1
ENSG000002367142no signal51421251651421405631
ENSG000002494292no signal5142869420142910915-1
ENSG000002134882no signal51439017031439025511
ENSG000002498812no signal51429851931432083371
ENSG00000204928GRXCR22no signal5145239296145252531-1
ENSG00000091009RBM272no signal51455831131457188141
ENSG000002393172no signal51455183341455185711
ENSG000002500252no signal5145686661145756526-1
ENSG000002717242no signal5145755154145755782-1
ENSG000002681262no signal51476985501477018911
ENSG00000249553PPP2R2B-IT12no signal5146293770146299069-1
ENSG00000253618GRPEL2-AS12no signal5148727679148737205-1
ENSG00000157510AFAP1L12no signal51486514341487213651
ENSG000002515832no signal5149311577149312231-1
ENSG00000155850SLC26A22no signal51493403001493730181
ENSG00000182578CSF1R2no signal5149432854149492935-1
ENSG000002383692no signal5149408912149409015-1
ENSG00000019582CD742no signal5149781200149792492-1
ENSG00000197083ZNF300P12no signal5150310207150325851-1
ENSG000002503092no signal5150050220150051952-1
ENSG00000211445GPX32no signal51504001241504085541
ENSG000002534722no signal5150757564150758201-1
ENSG00000197043ANXA62no signal5150480273150537443-1
ENSG000002721122no signal5151104392151104917-1
ENSG00000155506LARP12no signal51540924621541971671
ENSG000002420802no signal5151875279151875578-1
ENSG000002714772no signal51547768511547779131
ENSG00000135077HAVCR22no signal5156512843156569880-1
ENSG000002535192no signal51569929721569961061
ENSG000002514052no signal5156789623156887086-1
ENSG000002537982no signal5157109993157117274-1
ENSG00000222626RNU2-48P2no signal5157403774157403964-1
ENSG00000206819RNU6-260P2no signal51572361061572362121
ENSG000002534222no signal5157505107157505772-1
ENSG000002534242no signal51576831451576854441
ENSG000002534492no signal5157652360157661384-1
ENSG000002541352no signal51579121981579614461
ENSG00000170231FABP62no signal51596143741596657421
ENSG000002664322no signal51589529461589530181
ENSG000002537722no signal51596745241596752241
ENSG000002500612no signal5162439271162864332-1
ENSG00000022355GABRA12no signal51612741971613269751
ENSG000002494442no signal598825263988350711
ENSG00000249963EEF1A1P202no signal599332251993336361
ENSG00000174132FAM174A2no signal599871009999224451
ENSG000002497872no signal599737145997446031
ENSG00000222987RN7SKP682no signal51016382081016385141
ENSG000002537762no signal51041093421041354731
ENSG00000250958LINC004922no signal51019170721019532931
ENSG000002535842no signal5104253193104582065-1
ENSG000002504412no signal5108230048108230329-1
ENSG000002510272no signal5106150898106346715-1
ENSG000002660902no signal51090212811090213931
ENSG000002147842no signal5110527924110528740-1
ENSG000002490682no signal5109175829109176393-1
ENSG00000248430HMGB3P162no signal5111788400111788686-1
ENSG000002510142no signal51118826701118832021
ENSG000001729012no signal51152981511153633161
ENSG00000153037SRP192no signal51121969191122054851
ENSG000002722652no signal5115413807115414267-1
ENSG00000172869DMXL12no signal51183734671185848331
ENSG00000249582RPL7L1P42no signal5117114521117115227-1
ENSG000002488852no signal5118462477118464139-1
ENSG00000243333RN7SL174P2no signal5118642039118642326-1
ENSG00000248979LAMTOR3P22no signal5118468346118468577-1
ENSG000002136632no signal5118882826118883301-1
ENSG00000181867FTMT2no signal51211876501211885191
ENSG000002342592no signal51190158921190167751
ENSG000002496102no signal5121490191121491710-1
ENSG000002499162no signal5121705457121719263-1
ENSG000002721392no signal5121646992121647368-1
ENSG00000061455PRDM62no signal51224248161225299601
ENSG00000249400HMGB3P172no signal5122804475122805123-1
ENSG000002482962no signal5123828468123872041-1
ENSG00000253807LINC011702no signal5123641923123740772-1
ENSG00000222107RN7SKP1172no signal5124686561124686824-1
ENSG000002499042no signal5125221978125222446-1
ENSG000002502692no signal5124718552124719148-1
ENSG00000252185RNU6-752P2no signal5126091008126091109-1
ENSG000002509562no signal5126515448126515592-1
ENSG00000113368LMNB12no signal51261123151261727121
ENSG000002506032no signal5127174178127193496-1
ENSG000002486342no signal51279996711280785221
ENSG000002459372no signal5127276118127418864-1
ENSG00000186687LYRM72no signal51305065031305411191
ENSG000002342902no signal5131804582131808735-1
ENSG000002025332no signal51318038391318039491
ENSG00000113522RAD502no signal51318917111319803131
ENSG00000164404GDF92no signal5132196873132202576-1
ENSG00000131437KIF3A2no signal5132028320132073330-1
ENSG000002024172no signal51322810341322811461
ENSG000002720232no signal51322994621322998561
ENSG00000113558SKP12no signal5133484633133512729-1
ENSG00000221287MIR1289-22no signal5132763288132763398-1
ENSG000002509942no signal51337724021338282101
ENSG000002501672no signal51348952671349705641
ENSG00000198868MIR44612no signal5134263720134264016-1
ENSG000002640392no signal5135140194135140282-1
ENSG00000164621SMAD5-AS12no signal5135465196135470579-1
ENSG000002503782no signal51351483561351622711
ENSG000002498032no signal51358023661358559871
ENSG00000120729MYOT2no signal51372034801372235401
ENSG000002502842no signal51360706161360903751
ENSG000002664752no signal5137316150137316247-1
ENSG00000199880RNU6-888P2no signal5137458700137458800-1
ENSG00000061492WNT8A2no signal51374195811374280541
ENSG000002493522no signal56826626668325992-1
ENSG00000134057CCNB12no signal568462837684740721
ENSG00000244717RPS27P142no signal568765710687659631
ENSG000002710452no signal568645763686462721
ENSG000002492952no signal56877329968798293-1
ENSG00000205572SERF1B2no signal569321074693389401
ENSG000002501382no signal568927790689323121
ENSG000001799782no signal56939020269424261-1
ENSG00000172062SMN12no signal570220768702497691
ENSG000002055652no signal569803906698084221
ENSG000002516342no signal57039872570424580-1
ENSG00000247911HMGN1P122no signal57083347970833673-1
ENSG00000215630GUSBP92no signal57043571670585611-1
ENSG000002656132no signal57091081170910911-1
ENSG00000164326CARTPT2no signal571014990710168751
ENSG000002067702no signal572064529720646381
ENSG00000049883PTCD22no signal571616194716560521
ENSG00000263593MIR48042no signal572174418721744901
ENSG00000171617ENC12no signal57392323473937249-1
ENSG000002387382no signal57244993872450011-1
ENSG000002123632no signal57417848174178608-1
ENSG000002421982no signal574670288746706341
ENSG000002473722no signal57461598074632739-1
ENSG00000152359POC52no signal57496994975013313-1
ENSG000002511072no signal575576781755770921
ENSG000002516682no signal575466755754669281
ENSG000002386882no signal576079921760800241
ENSG00000145708CRHBP2no signal576248538762769831
ENSG00000264391RN7SL208P2no signal57613272776133020-1
ENSG00000251400ALDH7A1P12no signal576586093765876251
ENSG00000200331RNU6-183P2no signal57761074077610849-1
ENSG00000201955RNY3P12no signal57846605778466158-1
ENSG00000145685LHFPL22no signal57778103878065844-1
ENSG000002073912no signal578830676788307771
ENSG00000228716DHFR2no signal57992204779950802-1
ENSG00000249778TRMT112P22no signal57932899479329125-1
ENSG00000265684RN7SL378P2no signal581374246813745411
ENSG00000240411RPL5P162no signal582073616820744051
ENSG000002488702no signal58188259581883230-1
ENSG00000152422XRCC42no signal582373317826496061
ENSG000002500132no signal58317098583171640-1
ENSG000002433852no signal582497048824979601
ENSG00000252861RNU6-448P2no signal583492701834928071
ENSG000002502532no signal58450587884506721-1
ENSG000002148532no signal58429573884296113-1
ENSG000002510662no signal584845227848457701
ENSG00000250359PTP4A1P42no signal585383344853836651
ENSG000002493622no signal586957859869749641
ENSG00000241243RN7SL629P2no signal58659000886590290-1
ENSG00000164180TMEM161B2no signal58748545087565293-1
ENSG000002129302no signal590519236905197841
ENSG000002505552no signal587988468879886761
ENSG00000213730POLD2P12no signal592603135926041311
ENSG000002114982no signal593914474939145551
ENSG00000249353NPM1P272no signal59301854493019373-1
ENSG00000175471MCTP12no signal59403944694620279-1
ENSG00000173221GLRX2no signal59508702395158709-1
ENSG00000178015GPR1502no signal594955782949578461
ENSG000002510002no signal59517012895170750-1
ENSG00000206997RNU6-524P2no signal59554582595545931-1
ENSG00000213716FABP5P52no signal59530874595309150-1
ENSG000002721092no signal596140056961418081
ENSG000002487582no signal59652379496537584-1
ENSG000002503912no signal59928399999285287-1
ENSG000002506942no signal52435241824353552-1
ENSG000002264002no signal528927136289273911
ENSG000002496882no signal531754326317547631
ENSG000002483912no signal52938040329396088-1
ENSG000002388642no signal531824686318247891
ENSG00000207052RNU6-378P2no signal532309768323098741
ENSG000002308292no signal532222038322224531
ENSG000002229612no signal53237951332379573-1
ENSG000002491022no signal533009100330258301
ENSG000002514432no signal533229841332556591
ENSG000002506722no signal53309023233090455-1
ENSG000002151562no signal534190161341937581
ENSG00000242110AMACR2no signal53398628334008220-1
ENSG00000039560RAI142no signal534656342348327321
ENSG000002502342no signal53465651734657355-1
ENSG00000241829RPL21P542no signal534883162348836251
ENSG00000205838TTC23L2no signal534838938348995611
ENSG00000168724DNAJC212no signal534929698349590691
ENSG000002515912no signal53607189336072181-1
ENSG000002483492no signal53589629035896392-1
ENSG00000222743RNU6-1190P2no signal53762008737620190-1
ENSG000002485392no signal53789946537920971-1
ENSG00000248587GDNF-AS12no signal537840540378759011
ENSG000002497402no signal53873615738845931-1
ENSG00000251515CCDC11P12no signal53957158039572741-1
ENSG000002692152no signal539105358391073501
ENSG00000083720OXCT12no signal54173016741870621-1
ENSG000002607862no signal542188368421916251
ENSG00000151876FBXO42no signal541925356419418451
ENSG000002705132no signal542729240427296211
ENSG00000250722SEPP12no signal54279998242887494-1
ENSG000002504182no signal54469853344700910-1
ENSG000002150682no signal543041677430454921
ENSG00000263556RN7SL383P2no signal544716292447165871
ENSG00000249270KATNBL1P42no signal551226642512278701
ENSG00000249338HMGB1P472no signal55070545150706039-1
ENSG00000249069LINC010332no signal553616774537109551
ENSG00000248781PSMC1P42no signal55557113155572457-1
ENSG000002405352no signal55431712754338672-1
ENSG000002656652no signal55575286555752965-1
ENSG000002487272no signal55575362255777773-1
ENSG00000062194GPBP12no signal556469775565605061
ENSG000002072932no signal55646493556465036-1
ENSG000002494362no signal556910216569132581
ENSG000002482942no signal556869854569101681
ENSG000002481322no signal55740390957418168-1
ENSG00000202601MIR5822no signal55899943258999529-1
ENSG00000035499DEPDC1B2no signal55989273959996017-1
ENSG00000152931PART12no signal559783540598434841
ENSG00000213891RPL3P62no signal56068649560687698-1
ENSG00000186105LRRC702no signal561874562618772751
ENSG00000178722C5orf642no signal560933535610475901
ENSG00000186479RGS7BP2no signal563802084639081391
ENSG000002723702no signal564315865643163781
ENSG00000153015CWC272no signal564064757643145901
ENSG00000250732RPEP12no signal56454695464547611-1
ENSG000002516482no signal565028800650294811
ENSG000002532512no signal564920592649267181
ENSG00000153914SREK12no signal565435799654794431
ENSG000002537872no signal567485704674942351
ENSG000002513912no signal565594296656187721
ENSG00000250289VWA8P12no signal56815073768150912-1
ENSG000002122492no signal568169781681699141
ENSG00000145740SLC30A52no signal568389473684268961
ENSG000002494302no signal5922661399781
ENSG00000153404PLEKHG4B2no signal51403731900851
ENSG000002508482no signal5288948290436-1
ENSG00000164366CCDC1272no signal5196986218330-1
ENSG000002142782no signal5403846404661-1
ENSG00000247872SPCS2P32no signal58164618171161
ENSG000002499082no signal5767512769046-1
ENSG000002723472no signal5100515410067381
ENSG000002485972no signal519637231967268-1
ENSG000002504172no signal518560841856682-1
ENSG000002010262no signal5218482421849341
ENSG00000215231LINC010202no signal5503447250701171
ENSG000002508082no signal553960855396448-1
ENSG000002505292no signal550693055078424-1
ENSG00000133398MED102no signal563719946378707-1
ENSG000002059762no signal572998877306705-1
ENSG000002725202no signal5667121966744991
ENSG00000078295ADCY22no signal5739632178301941
ENSG00000124279FASTKD32no signal578592727869150-1
ENSG000002507612no signal577079157749879-1
ENSG000002494862no signal581576548157901-1
ENSG000002501982no signal5883984488816371
ENSG000002497822no signal5852529185287911
ENSG000002500012no signal595199659523290-1
ENSG00000150756FAM173B2no signal51022644210250009-1
ENSG000002724172no signal51020371210204152-1
ENSG000002717152no signal51026960110270030-1
ENSG000002526712no signal510337389103374981
ENSG00000145495MARCH62no signal510353815104405001
ENSG000002598022no signal51035281310353713-1
ENSG000002141792no signal510541568105418071
ENSG000002514232no signal513860447138978801
ENSG000002649212no signal512599735125998121
ENSG00000250247SEPHS2P12no signal514960341149615021
ENSG00000248403NACAP62no signal51619219716192818-1
ENSG00000183654MARCH112no signal51606724816180871-1
ENSG000002718922no signal51710746917107898-1
ENSG000001852962no signal517306490173070691
ENSG00000252908RNU6-1003P2no signal517240720172408241
ENSG000002496622no signal517444119174840551
ENSG000002496202no signal51751194217512347-1
ENSG000002482052no signal51750215217502472-1
ENSG000002500552no signal517525344175259381
ENSG000002483372no signal51765448217654752-1
ENSG00000249191UBE2V1P122no signal51888673118887204-1
ENSG000002122782no signal518236232182363051
ENSG000002492892no signal52332953623330001-1
ENSG00000213430HSPD1P12no signal521882694218844211
ENSG000002485912no signal523456577234569591
ENSG000002264322no signal524170479241713551
ENSG000002486052no signal52540484225446034-1
ENSG00000131183SLC34A12no signal51768062361768258491
ENSG00000169220RGS142no signal51767848381767996021
ENSG000002501012no signal51773666231774100551
ENSG000002724592no signal51769818251769823651
ENSG00000113240CLK42no signal5178029665178057616-1
ENSG00000264205RN7SL71P2no signal5178893834178894126-1
ENSG000002133282no signal5178336711178337610-1
ENSG00000204659CBY32no signal5179105584179107975-1
ENSG000002509992no signal51790847631790914331
ENSG00000221394MIR12292no signal5179225278179225346-1
ENSG00000161021MAML12no signal51791598511792235121
ENSG000002494122no signal51793906151793914191
ENSG000002534802no signal5179512717179514038-1
ENSG00000198995MIR3402no signal5179442303179442397-1
ENSG000002637592no signal51800094451800095301
ENSG000002297212no signal5179653378179654000-1
ENSG000002312282no signal51804092431804096111
ENSG000002492872no signal5180394189180397762-1
ENSG000002485142no signal5180632361180633120-1
ENSG00000146054TRIM72no signal5180620924180632293-1
ENSG00000183718TRIM522no signal5180681417180688119-1
ENSG00000264732MIR46382no signal5180649566180649633-1
ENSG000002481252no signal51448094311448306621
ENSG00000169302STK32A2no signal51466145261467674151
ENSG00000248568KRT8P482no signal5146085944146087163-1
ENSG00000156475PPP2R2B2no signal5145967936146464347-1
ENSG00000176049JAKMIP22no signal5146967990147162338-1
ENSG00000196800SPINK142no signal51475492961475549611
ENSG000002495182no signal5147231207147232222-1
ENSG00000200161RN7SKP1452no signal5148495741148496043-1
ENSG00000249834PGBD4P32no signal51476868611476878211
ENSG00000222213RNU6-588P2no signal5148986200148986304-1
ENSG00000269936MIR1452no signal51488098491488123971
ENSG00000132915PDE6A2no signal5149237519149324356-1
ENSG00000155846PPARGC1B2no signal51491098611492345851
ENSG00000113721PDGFRB2no signal5149493400149535435-1
ENSG00000011083SLC6A72no signal51495695201496023511
ENSG00000113722CDX12no signal51495463581495641201
ENSG00000164587RPS142no signal5149822753149829319-1
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