Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

SW 48 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 2.05
Chromosome Average Copy Number: 2

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
13190269501151083982no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000212559RNA5SP352no signal139467772494677852-1
ENSG00000237924RPL21P1122no signal139541280795413269-1
ENSG00000125285SOX212no signal139536188695364389-1
ENSG00000200211RNY4P272no signal139598836095988455-1
ENSG00000243300LINC003592no signal139759353597636426-1
ENSG00000235137HSP90AB6P2no signal139753609697542067-1
ENSG00000165621OXGR12no signal139763797397646984-1
ENSG00000233124LINC004562no signal139782472397831876-1
ENSG000002384072no signal1398538063985381661
ENSG00000202290RNA5SP372no signal139801522698015355-1
ENSG00000233291RPL7AP612no signal1398553907985545421
ENSG00000222969RN7SKP82no signal139885608998856446-1
ENSG00000152767FARP12no signal1398794816991020271
ENSG00000263399MIR31702no signal1398860778988608541
ENSG000002695992no signal139898190998985490-1
ENSG000002691892no signal1398885904988869541
ENSG00000088386SLC15A12no signal139933605599404908-1
ENSG00000043355ZIC22no signal131006340261006390181
ENSG00000234168LINC010392no signal131002293661002326221
ENSG00000134864GGACT2no signal13101183810101241782-1
ENSG00000102466FGF142no signal13102372134103054124-1
ENSG00000234354RPS26P472no signal13101192089101192528-1
ENSG00000229975LIPT1P12no signal131026544751026556601
ENSG00000222301RNY5P82no signal131034723431034724191
ENSG000001967772no signal13107594562107594907-1
ENSG00000134884ARGLU12no signal13107194021107220512-1
ENSG00000139826ABHD132no signal131088707271088866031
ENSG00000234854LINC006762no signal131103806291103823541
ENSG00000223617LINC003702no signal131099343211099400811
ENSG000002558312no signal131112915551112923401
ENSG00000260102LINC010702no signal131128516641128553141
ENSG000002649892no signal13112563079112563148-1
ENSG00000153498SPACA72no signal131130306331130890031
ENSG000002647262no signal13113372159113372228-1
ENSG00000068650ATP11A2no signal131133446431135414821
ENSG000002678682no signal13113619149113620445-1
ENSG00000139842CUL4A2no signal131138625521139193991
ENSG000002693762no signal131136639851136646331
ENSG00000185896LAMP12no signal131139515561139779871
ENSG00000214823NXT1P12no signal133974377339744088-1
ENSG00000102743SLC25A152no signal1341363548413842471
ENSG00000207458RNY3P92no signal1340800964408010691
ENSG00000264226MIR31682no signal134167515541675236-1
ENSG00000215482CALM2P32no signal134174483641745284-1
ENSG000002640422no signal1342024148420242351
ENSG00000172766NAA162no signal1341885341419511661
ENSG00000238189ENOX1-AS22no signal1344032601440332591
ENSG00000215475SIAH32no signal134635440546425871-1
ENSG000002530512no signal134591044945910582-1
ENSG00000229423RPL27AP82no signal134834077548341220-1
ENSG00000139679LPAR62no signal134896370749018840-1
ENSG00000227848SUCLA2-AS12no signal1348575525485766881
ENSG000002223912no signal134932622549326292-1
ENSG00000214359RPL18P102no signal1350673467506740041
ENSG00000136169SETDB22no signal1350018429500691381
ENSG00000150510FAM124A2no signal1351796503518583771
ENSG00000266611MIR47032no signal1352126725521268031
ENSG00000253309SERPINE32no signal1351909909519388711
ENSG00000224451ATP5F1P12no signal1352172552521735961
ENSG00000102796DHRS122no signal135234212952378293-1
ENSG000002175762no signal135274184452865692-1
ENSG00000253710ALG112no signal1352586534526038001
ENSG00000136100VPS362no signal135298673753024763-1
ENSG00000211579MIR7592no signal1353384179533842741
ENSG00000139675HNRNPA1L22no signal1353191605532179191
ENSG000002209902no signal135394198053942091-1
ENSG00000204918PRR20B2no signal1357721622577246431
ENSG00000261517LINC005582no signal1354389554544502541
ENSG00000230009MTCO2P32no signal1357778513577789331
ENSG00000214335CTAGE16P2no signal1359102749591051601
ENSG00000215430OR7E156P2no signal1364316498643169451
ENSG00000227611LINC010742no signal1362895438628965311
ENSG00000214266STARP12no signal136588398765885085-1
ENSG00000202478RNU6-81P2no signal1364357934643580371
ENSG00000228842PCDH9-AS22no signal1367399301674891631
ENSG00000226537OR7E33P2no signal1368485219684860801
ENSG00000214263RPSAP532no signal136784097767841838-1
ENSG00000229910HNRNPA1P182no signal136887573768877434-1
ENSG00000230405RPS3AP522no signal1369208322692086181
ENSG00000226617RPL21P1102no signal1373277831732782761
ENSG00000225801RABEPKP12no signal1371870342718713671
ENSG00000224853LINC003932no signal137398761074222390-1
ENSG00000235532LINC004022no signal1374805594748341131
ENSG00000228295LINC003922no signal1374138381741622071
ENSG00000206617RNY1P52no signal137486323774863351-1
ENSG00000214249CTAGE11P2no signal137581208075814432-1
ENSG00000226240LINC003812no signal1374993310750092961
ENSG00000118939UCHL32no signal1376123619761800851
ENSG00000102794IRG12no signal1377522632775327771
ENSG00000136153LMO72no signal1376194570764340041
ENSG00000234377RNF219-AS12no signal1378493824791914631
ENSG00000229249LINC004462no signal1378587018786277301
ENSG00000236133LINC010692no signal137856350778564781-1
ENSG00000237109RPL21P1112no signal1379335310793357861
ENSG00000225427LINC003312no signal137936145479366442-1
ENSG000002704002no signal1383719675837200381
ENSG00000202398RNU6-61P2no signal138094356180943669-1
ENSG00000233349LINC003332no signal1385136499851373711
ENSG00000228074UBBP52no signal1387871259878715241
ENSG00000231879TXNL1P12no signal1387377755873783081
ENSG00000229443LINC004332no signal1389193119891977641
ENSG00000234384LINC010492no signal1391145541911873341
ENSG00000236176LINC003532no signal139020094590206058-1
ENSG00000231914LINC003872no signal1319246967192503031
ENSG00000229788LINC003882no signal131918443819185815-1
ENSG00000236169LINC004182no signal131929290719293869-1
ENSG00000227784ZNF965P2no signal1319308220193090361
ENSG00000204718CNN2P122no signal1319300846193015541
ENSG00000187721GTF2IP32no signal131960013819606766-1
ENSG00000237164SLC25A15P22no signal1319985371199903281
ENSG000002348942no signal131972569419726447-1
ENSG00000225316LINC003502no signal1320161258201624901
ENSG00000236076LINC010722no signal1320676840206773691
ENSG000002386652no signal1320449327204494251
ENSG00000172458IL17D2no signal1321276266212972371
ENSG00000237952RPL7AP732no signal1323377435233777871
ENSG00000201821RNU4-9P2no signal132161266821612806-1
ENSG00000262619LINC006212no signal132346879523490508-1
ENSG00000102683SGCG2no signal1323755091238993041
ENSG00000205863C1QTNF9B2no signal132446523824476794-1
ENSG00000151835SACS2no signal132390296524007841-1
ENSG00000253771TPTE2P12no signal132549881525542625-1
ENSG00000225105LINC010762no signal132576724525784433-1
ENSG00000234056AMER2-AS12no signal132574696625754217-1
ENSG00000132970WASF32no signal1327131840272630851
ENSG00000223782RPS21P82no signal1327551680275519261
ENSG00000230256FGFR1OP2P12no signal1327479499274799981
ENSG00000186184POLR1D2no signal1328194903282415481
ENSG00000102755FLT12no signal132887448929069265-1
ENSG00000207330RNU6-73P2no signal1328402900284030061
ENSG00000132963POMP2no signal1329233241292530621
ENSG00000233588CYP51A1P22no signal132929652329298158-1
ENSG00000139508SLC46A32no signal132927420129293107-1
ENSG00000224329LINC002972no signal133044675030462542-1
ENSG00000224405LINC005722no signal133049278430500788-1
ENSG00000132965ALOX5AP2no signal1331309645313385561
ENSG00000232117LINC003842no signal133072602330733758-1
ENSG000002381852no signal133154742631551760-1
ENSG00000133105RXFP22no signal1332313674323770091
ENSG00000230403LINC010662no signal133156929931570275-1
ENSG00000230300STARD13-IT12no signal133373272433738546-1
ENSG000002718502no signal1334922180351883071
ENSG000002304902no signal133392934334250905-1
ENSG00000172915NBEA2no signal1335516424362471591
ENSG00000207203RNU6-71P2no signal1336841305368414111
ENSG00000180660MAB21L12no signal133604792636050832-1
ENSG000002660472no signal1336929928369300151
ENSG00000232378RPL29P282no signal133750057537501356-1
ENSG00000133101CCNA12no signal1337005967370170191
ENSG00000133110POSTN2no signal133813672038172981-1
ENSG00000188811NHLRC32no signal1339612443396242461
ENSG00000252795RNU6-56P2no signal1339353561393536531
ENSG00000229287FABP5P42no signal139283296892833138-1
ENSG00000224394GPC6-AS22no signal139447067794488397-1
ENSG00000271492MEMO1P52no signal1396046303960467081
ENSG00000252335RNU6-62P2no signal1395671489956715901
ENSG00000102580DNAJC32no signal1396329393964472431
ENSG00000224418STK24-AS12no signal1399229498992310841
ENSG00000139797RNF113B2no signal139882803998829519-1
ENSG00000212197RNY3P62no signal13100188573100188650-1
ENSG00000125246CLYBL2no signal131002589191005493871
ENSG000002243562no signal13101187995101232371-1
ENSG00000263615MIR43062no signal131002953131002954031
ENSG00000125247TMTC42no signal13101256181101327347-1
ENSG00000226620LINC003432no signal131063566291064167891
ENSG000002723492no signal13102369198102369728-1
ENSG00000230156LINC004432no signal131073062641073245111
ENSG00000229938MYO16-AS22no signal13109753609109754267-1
ENSG000002214732no signal131082883791082884641
ENSG00000134871COL4A22no signal131109581591111653741
ENSG00000225760LINC004312no signal131116356541116429111
ENSG00000259831LINC005672no signal13111462023111465431-1
ENSG00000233644ARHGEF7-IT12no signal131117749991117966111
ENSG00000232684ATP11A-AS12no signal13113399763113409007-1
ENSG00000182968SOX12no signal131127219131127260201
ENSG000002346032no signal131135395511135399941
ENSG00000126217MCF2L2no signal131135486921137540531
ENSG00000231882F10-AS12no signal13113782469113783194-1
ENSG000002693562no signal131136630921136637381
ENSG00000153531ADPRHL12no signal13114076260114107839-1
ENSG00000184497TMEM255B2no signal131144622161145149261
ENSG00000150403TMCO32no signal131141453101142045421
ENSG00000169062UPF3A2no signal131150470591150712831
ENSG00000215483LINC005982no signal134102513141055143-1
ENSG00000229456RLIMP12no signal1341192875411954851
ENSG00000205240OR7E36P2no signal134200542542006446-1
ENSG00000223280RNU6-57P2no signal134192869341928795-1
ENSG00000229696KARSP12no signal1342499734425014851
ENSG00000229928LINC004002no signal1343732767437336021
ENSG00000133106EPSTI12no signal134346052443566407-1
ENSG00000179611DGKZP12no signal1344542560445453351
ENSG000002718182no signal1345697228456975491
ENSG00000227258SMIM2-AS12no signal1344716682448130101
ENSG00000133112TPT12no signal134591100845915505-1
ENSG00000228869COX4I1P22no signal1346245980462465261
ENSG000002384832no signal134680980546809908-1
ENSG00000235903CPB2-AS12no signal1346626941466874671
ENSG00000241353PPP1R2P42no signal134691710247012325-1
ENSG00000102531FNDC3A2no signal1349550048497839151
ENSG00000227019OR7E101P2no signal1347034744470352561
ENSG00000102543CDADC12no signal1349822047498676181
ENSG00000236577SNRPGP142no signal1350063106500635001
ENSG000002154622no signal135000749550020554-1
ENSG00000123179EBPL2no signal135023485950265611-1
ENSG00000232150ST13P42no signal1350746225507473171
ENSG000002035472no signal1350243040502432541
ENSG000002318562no signal1352378433523873561
ENSG00000236044FABP5P22no signal1352540878525412851
ENSG00000123191ATP7B2no signal135250680952585630-1
ENSG00000198384TPTE2P32no signal1353063128531612221
ENSG000002666992no signal135538000255380092-1
ENSG00000139734DIAPH32no signal136023971760738121-1
ENSG00000264387MIR50072no signal1355748589557486831
ENSG00000227336LINC004342no signal136078848660789080-1
ENSG00000197991PCDH202no signal136198381862002220-1
ENSG00000266663MIR31692no signal136177393261774014-1
ENSG000002269742no signal1364320934643213231
ENSG00000263561MIR47042no signal1366792382667924561
ENSG00000215432OR7E104P2no signal1364411166644115891
ENSG00000230040LINC003642no signal1367946519679541081
ENSG00000224640SRSF1P12no signal136998234869982867-1
ENSG00000227969NPM1P222no signal136840600868406959-1
ENSG00000232314PSMC1P132no signal137046823370469217-1
ENSG00000226554SOGA2P12no signal1371497796714985871
ENSG00000204899MZT12no signal137328249573301825-1
ENSG00000226846LINC003482no signal1371589273717425491
ENSG00000232041PSMD10P32no signal1373610539736109861
ENSG00000200267RNU6-66P2no signal137368705273687155-1
ENSG00000236972FABP5P12no signal137367471373675123-1
ENSG000002659592no signal137369884973698947-1
ENSG00000228002DHX9P12no signal1377559003775620781
ENSG00000223880LINC010782no signal1375824616758261481
ENSG00000005812FBXL32no signal137756674077601330-1
ENSG000002356252no signal137884985578851649-1
ENSG00000236051MYCBP2-AS12no signal1377649649776726771
ENSG00000271386SRGNP12no signal1378859973788604231
ENSG000002717762no signal1379170264791737541
ENSG00000200686RNY3P32no signal137892936278929463-1
ENSG00000232132NDFIP2-AS12no signal138005149980055366-1
ENSG00000136158SPRY22no signal138091011180915086-1
ENSG000002389802no signal138177839881778491-1
ENSG000002292462no signal1381617805816185771
ENSG00000237148HIGD1AP22no signal1381847026818473051
ENSG00000214181DDX6P22no signal1386927755869295241
ENSG00000237099GYG1P22no signal1383397266833982711
ENSG00000266052MIR45002no signal138827092088270995-1
ENSG00000263741MIR548AS2no signal1393142416931424731
ENSG00000206787RNU6-76P2no signal1319454194194542971
ENSG00000229147SMPD4P22no signal131972670719745334-1
ENSG00000226057PHF2P22no signal131952089519636858-1
ENSG00000238132CASC4P12no signal132013772920139040-1
ENSG000002695912no signal1320268547202692401
ENSG00000196199MPHOSPH82no signal1320207788202475991
ENSG00000233469ST6GALNAC4P12no signal132039226120392759-1
ENSG00000180172RPS12P232no signal132166845721668853-1
ENSG00000233524RANP82no signal132132117421322196-1
ENSG000002244292no signal132187765421922860-1
ENSG00000235076GAPDHP522no signal1321932512219334531
ENSG00000226908HIST1H2BPS32no signal132205797322058313-1
ENSG00000180776ZDHHC202no signal132195026322033509-1
ENSG00000127863TNFRSF192no signal1324144509242502321
ENSG00000205861C1QTNF9B-AS12no signal1324463028244714021
ENSG000002687352no signal1324322243243239011
ENSG000002287412no signal1324553949246091661
ENSG000002430082no signal1325141011251718141
ENSG00000205822TPTE2P62no signal1324982295251718141
ENSG00000165566AMER22no signal132573582225746426-1
ENSG00000237001WASF3-AS12no signal132718068127215501-1
ENSG00000231983LINC004152no signal132662641426627523-1
ENSG00000152484USP122no signal132764029327746033-1
ENSG00000226703NPM1P42no signal132827053028271341-1
ENSG00000139517LNX22no signal132812005028194541-1
ENSG00000232587EEF1A1P32no signal1328788650287900341
ENSG00000252928RNU6-64P2no signal1330855902308560061
ENSG00000175664TEX262no signal1331506840315496391
ENSG00000232489MFAP1P12no signal133111578031117034-1
ENSG00000229427ANKRD26P42no signal1331885426318870581
ENSG00000133116KL2no signal1333590207336402821
ENSG000002306332no signal1332872291328728491
ENSG000002215192no signal133606855136068674-1
ENSG00000120693SMAD92no signal133741896837494902-1
ENSG000002226022no signal133730273937302829-1
ENSG00000252812RN7SKP22no signal134098125940981577-1
ENSG00000150907FOXO12no signal134112980441240734-1
ENSG00000125249RAP2A2no signal1398086476981213821
ENSG00000226977HMGN1P242no signal139646156496461861-1
ENSG000002707252no signal1398591610986057931
ENSG00000228889UBAC2-AS12no signal139984863199852964-1
ENSG00000243366RN7SL60P2no signal1399324234993245291
ENSG00000218502H2AFZP32no signal139986762699868012-1
ENSG00000238241CCR12P2no signal13100060035100061316-1
ENSG00000228808HMGB3P42no signal131000244271000249401
ENSG000002662072no signal13100105650100105723-1
ENSG00000228501RPL15P182no signal13100802735100803346-1
ENSG00000260738LINC005542no signal13100647153100650163-1
ENSG00000237082COX5BP62no signal13101276129101276683-1
ENSG00000214051ARF4P32no signal13101408805101409313-1
ENSG00000234445FGF14-AS12no signal131030198891030260161
ENSG00000215399HMGB3P72no signal131024542281024548381
ENSG00000272143FGF14-AS22no signal131030469801030480531
ENSG00000250878METTL21EP2no signal131035324491035483831
ENSG00000231633LINC002832no signal131033953401033975741
ENSG000002525502no signal13106549872106549992-1
ENSG00000174408PPIAP242no signal13107516164107516634-1
ENSG00000272274LINC005512no signal131072701581072837071
ENSG000002018472no signal13107973243107973311-1
ENSG00000139832RAB202no signal13111175417111214080-1
ENSG00000232814COL4A2-AS12no signal13111154922111160526-1
ENSG00000213995CARKD2no signal131112678811112923401
ENSG000002603852no signal131127378631127397851
ENSG00000229152ANKRD10-IT12no signal13111547406111551519-1
ENSG00000230371KARSP22no signal131137847301137863681
ENSG00000198176TFDP12no signal131142390131142957851
ENSG00000264539MIR548AR2no signal131150099801150100361
ENSG00000227208LINC005522no signal13114451484114454062-1
ENSG00000229723LINC010542no signal13115095034115099423-1
ENSG00000102738MRPS312no signal134130343241345309-1
ENSG00000270444AZU1P12no signal134043084740431231-1
ENSG00000168852TPTE2P52no signal134139643241495890-1
ENSG00000120688WBP42no signal1341635410416581371
ENSG00000239827SUGT1P32no signal134148229541495910-1
ENSG00000238025ZDHHC4P12no signal1343507994435090281
ENSG00000151778SERP22no signal1344947801449718501
ENSG00000232540RPL36P192no signal1343968661439689611
ENSG000002257272no signal1345011343450269631
ENSG00000136167LCP12no signal134670005546786006-1
ENSG00000237585LINC004072no signal1345225948452751521
ENSG00000173988LRRC632no signal1346786083468515011
ENSG00000244521RN7SL700P2no signal134803307848033369-1
ENSG000002318172no signal134702927047060641-1
ENSG00000233610LINC004622no signal134915111049152224-1
ENSG00000123178SPRYD72no signal135048684250510626-1
ENSG000002293232no signal135109506951101585-1
ENSG00000231607DLEU22no signal135060126950699856-1
ENSG00000233672RNASEH2B-AS12no signal135145082251484848-1
ENSG00000222920RNA5SP292no signal135160188351601988-1
ENSG00000123201GUCY1B22no signal135156864751654998-1
ENSG00000102786INTS62no signal135192821352028400-1
ENSG00000197168NEK52no signal135261109352703214-1
ENSG00000123171CCDC702no signal1352436117524403661
ENSG000002716522no signal1354690611546909861
ENSG00000271140PRR20FP2no signal1357747587577477661
ENSG00000136149RPL13AP252no signal135501483955015450-1
ENSG00000223076RNA5SP312no signal1361187742611878681
ENSG00000229578LINC003582no signal136257822662603681-1
ENSG00000253018RNY4P312no signal136139083161390923-1
ENSG00000214269LGMNP12no signal136553222965533528-1
ENSG000002216852no signal1366438305664383981
ENSG00000236534H3F3BP12no signal1372249199722496011
ENSG00000235737TRIM60P192no signal1366843129668445901
ENSG00000200037RNA5SP322no signal1372552226725523441
ENSG00000201253RNU4-10P2no signal1373765665737658041
ENSG000002517152no signal137303465773034739-1
ENSG00000206812RNU6-38P2no signal1375683724756838301
ENSG00000178695KCTD122no signal137745431277460540-1
ENSG00000226665SSR1P22no signal1375710291757110771
ENSG00000229521MYCBP2-AS22no signal137765464677655325-1
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