Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H28 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.8

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
219764385480969584no signal
1811543780150572no signal
412282102103903no signal
X11980526663544no signal
Y696521574721172no signal
1419002125204233733no signal
2216052529512344564no signal
Y813750683733842no signal
Y28608558590328094no signal
Y28470991285390622no signal
Y765397179328024no signal
Y9695728139119295no signal
Y23799512241197802no signal
Y24177819243534708no signal
410234215102352692no signal
12487958522492243895no signal
X59046325593571885no signal
Y685910269639018no signal
Y14794297150424662no signal
Y17938784185546074no signal
Y19349615193826133no signal
Y21205108213857388no signal
10727601355067054no signal
Y944187294967827no signal
Y21575002229051952no signal
1660778340112844no signal
1634012169479739643no signal
1647974580728936973no signal
1672894749734392333no signal
1673439355811703913no signal
1681275401814298343no signal
1681431713902875363no signal
17527222278373no signal
1722227842255871054no signal
1725588290433167054no signal
1743321992494476635no signal
1749447877495688575no signal
1749571508532794336no signal
1753279939582584055no signal
1758260372615050776no signal
1761507295664771725no signal
1766477984704859486no signal
1770486682810497265no signal
199091145736393no signal
19459163445916348no signal
194593695424298334no signal
1942429942433156124no signal
1943321138436425532no signal
1943643378436528244no signal
1943654209590978554no signal
2061306294285243no signal
2029436803295396924no signal
2029540629629561544no signal
X2703391548870422no signal
X54910727585619312no signal
X61728830884656112no signal
X88466448902814953no signal
X90282030916715312no signal
Y15977206162228314no signal
1728119041060133775no signal
16173610498174no signal
11059482168308212no signal
116831863170484804no signal
117048873193937102no signal
119492788255833422no signal
125646987317769512no signal
131780210484532274no signal
148457543535318585no signal
153531968557234414no signal
11977485862146023005no signal
12146029892194027666no signal
12194050672373034175no signal
12373036682396104156no signal
12396106202487252355no signal
212785891310684no signal
289133125893113547no signal
2893115401222052615no signal
21222056601234923735no signal
21234924202430894575no signal
360346412551025no signal
341623222650804125no signal
365082924903433027no signal
3903642611257122144no signal
31257122711294166493no signal
31294184691295068934no signal
31295103791625130934no signal
31626265731628785594no signal
31628791931745999584no signal
31746010711746697672no signal
31746764071747377954no signal
31747378201978961194no signal
410236142202192253no signal
420219446202511174no signal
420251518238553084no signal
423857235545101383no signal
454513660560157492no signal
456016158567835523no signal
456783609577398992no signal
457743328617756453no signal
461777081704496142no signal
470450598710017852no signal
4710076611260285672no signal
41260341811267334412no signal
41267340511700089472no signal
41700091081707469922no signal
41707537391910279242no signal
5155331167413934no signal
51167414541255719866no signal
51255724951271485035no signal
51271488451312820646no signal
51312824471437210255no signal
51437212091483339346no signal
51483362131485160125no signal
51485191871547625555no signal
51547629831562087006no signal
51562090651605112065no signal
51605135321675222656no signal
51675226821807903215no signal
614966228561922no signal
6285659828692884no signal
62869521839577424no signal
683963230848116374no signal
6848154211127819354no signal
61127932791135861694no signal
61135877341710510064no signal
743259129944064no signal
713002199132112632no signal
713218051132180515no signal
713218674920573204no signal
792060709933442704no signal
7933498511591270054no signal
83125540755143no signal
8407567144681143no signal
8446933072551113no signal
8726736678320555no signal
8783606089759533no signal
8897958197926623no signal
897931211462981563no signal
9377471506354no signal
9177058219687122no signal
922037370282576622no signal
928442343295585232no signal
929563427296435423no signal
929646438337236032no signal
933724812387679423no signal
938768084699780084no signal
9699780231157813185no signal
91157870411160626112no signal
91160633021161003685no signal
91161044051278010655no signal
91278013011287807925no signal
155729368727689175no signal
11060240561094592965no signal
11094603141126235234no signal
11126240951525555285no signal
11525862791856311115no signal
11856312151977465656no signal
Y20838445211590555no signal
91287816291410913955no signal
11198510958591313no signal
1195859376960449322no signal
11960520811250745023no signal
111250882701251918433no signal
111251922811349447703no signal
1215044394267204no signal
12942686696305572no signal
12973163797777062no signal
12978014198223874no signal
129822952115040914no signal
1211552193115532275no signal
1211553368174924004no signal
1217496993182994574no signal
1218304128588335304no signal
1258836631595603134no signal
1259560439622725694no signal
1262273872627249672no signal
1262731660627507816no signal
12627566351337781904no signal
1319026950439249974no signal
1343925520443896544no signal
1344391936551478534no signal
1355157789575601854no signal
13575606941151083984no signal
1420424926685270662no signal
1468527112686898133no signal
14686904421061979892no signal
141061993771069397893no signal
141069407061072854372no signal
1520016329203928225no signal
1520395530225880197no signal
1522673400454776635no signal
1545482675459083715no signal
1545913144871172555no signal
1587117348873715155no signal
15873718981024690415no signal
X91672782923583453no signal
X923588691292673732no signal
X1292694831551823554no signal
Y265043947033282no signal
Y470337955342163no signal
Y568016457959035no signal
Y589587561014263no signal
Y640832968310072no signal
Y796471380928473no signal
Y850907087499153no signal
Y13919856144492462no signal
Y14450882146210936no signal
Y15190565152350553no signal
Y15311544155790853no signal
Y15594523156829512no signal
Y15768154159029505no signal
Y16392263166993342no signal
Y16734056170378663no signal
Y17077548179127342no signal
Y18570274185956245no signal
Y18636049192751442no signal
Y19435858196176662no signal
Y20657325208043048no signal
Y23002346236465003no signal
Y24437432245726063no signal
Y27772573284586496no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000200197RNU1-21P3no signal111236346351236347971
ENSG00000181518OR8D43no signal111237771091237781831
ENSG00000254737OR10G43no signal111238862821238872171
ENSG00000234560OR10G83no signal111239002971239013411
ENSG00000182634OR10G73no signal11123908773123909717-1
ENSG00000110002VWA5A3no signal111239860691240184281
ENSG00000239426OR8F1P3no signal111240778901240788221
ENSG00000255425OR8G3P3no signal111240853461240863941
ENSG000001812143no signal111240954371240963651
ENSG00000255030OR8B5P3no signal11124227456124228365-1
ENSG00000255341OR8Q1P3no signal111244714801244721341
ENSG00000154144TBRG13no signal111244927321245052871
ENSG00000154146NRGN3no signal111246097421246171061
ENSG000002545093no signal111246611241246615561
ENSG000002549413no signal11124677718124678165-1
ENSG000002159423no signal11124712964124713043-1
ENSG00000154134ROBO33no signal111247352821247513661
ENSG00000187686KRT18P593no signal111249830571249966771
ENSG000002592903no signal111250580111250613001
ENSG000002612573no signal11125970400125972308-1
ENSG000002547713no signal11126049392126049593-1
ENSG00000182934SRPR3no signal11126132814126139039-1
ENSG000002550623no signal11126164193126174213-1
ENSG000002546073no signal111265227471265519991
ENSG000002553173no signal111268623481268653541
ENSG000002450083no signal11128499548128556817-1
ENSG00000043039BARX23no signal111292458351293221711
ENSG00000240121RPS27P203no signal111294077641294080091
ENSG000002551883no signal11129657959129658085-1
ENSG00000255352PPP1R10P13no signal11130659126130660920-1
ENSG00000264919MIR46973no signal11133768399133768476-1
ENSG000002546163no signal111340429901340435751
ENSG00000151502VPS26B3no signal111340945391341176861
ENSG000002355053no signal11104772276104789800-1
ENSG000002544333no signal11105956717105972702-1
ENSG00000225215SMARCE1P13no signal11107274130107275315-1
ENSG00000149311ATM3no signal111080932111082398291
ENSG00000178202KDELC23no signal11108342832108369159-1
ENSG00000255379CYCSP293no signal11108693060108693377-1
ENSG000002649973no signal11109134221109134291-1
ENSG000002704233no signal11109855969109856386-1
ENSG000002552103no signal111099202531099208851
ENSG00000239354RPS17P153no signal11110976271110976619-1
ENSG00000264032MIR44913no signal111112184821112185491
ENSG00000183644C11orf883no signal111113855101114077561
ENSG00000223324RN7SKP2733no signal111115538351115541481
ENSG000002549903no signal11111639392111649074-1
ENSG000002585293no signal11111657010111750149-1
ENSG00000150768DLAT3no signal111118955381119351141
ENSG00000150773PIH1D23no signal11111934734111944998-1
ENSG000002552923no signal111119576271120645281
ENSG000002727903no signal111120412531120713941
ENSG00000243930RPS12P213no signal111120890491120894431
ENSG000002546263no signal111126580271126665771
ENSG00000149292TTC123no signal111131852511132542661
ENSG000002560913no signal111135824421135831201
ENSG000002566033no signal11113641115113642413-1
ENSG000002564523no signal111136887991136931801
ENSG00000109906ZBTB163no signal111139303151141213981
ENSG000002211123no signal11113957533113957651-1
ENSG00000076053RBM73no signal111142707521142849251
ENSG000002563153no signal111152674741152683761
ENSG000002602543no signal111155092811155176801
ENSG00000246100LINC009003no signal11115624966115631345-1
ENSG000002396003no signal11115821823115822209-1
ENSG00000110244APOA43no signal11116691419116694022-1
ENSG00000118137APOA13no signal11116706467116708666-1
ENSG000002643443no signal11116886146116886245-1
ENSG000002704033no signal111175391981175395731
ENSG00000137731FXYD23no signal11117671559117699413-1
ENSG00000255163HSPE1P183no signal11118079647118079926-1
ENSG00000149573MPZL23no signal11118124118118135251-1
ENSG00000167286CD3D3no signal11118209669118213459-1
ENSG00000160654CD3G3no signal111182150591182258761
ENSG00000118094TREH3no signal11118528026118550399-1
ENSG00000207462RNU6-376P3no signal111185730511185731561
ENSG000002554223no signal111185753161186209731
ENSG00000254621SETP163no signal11118704555118705265-1
ENSG00000160683CXCR53no signal111187544751187685081
ENSG00000264211MIR44923no signal111187814171187814961
ENSG00000240970RPL23AP643no signal11118873722118874156-1
ENSG000002721863no signal11118938085118938409-1
ENSG00000188486H2AFX3no signal11118964564118966177-1
ENSG00000222249RNU6-262P3no signal11119160272119160387-1
ENSG00000076706MCAM3no signal11119179241119192231-1
ENSG00000235718MFRP3no signal11119209652119217383-1
ENSG000002547403no signal111192434161192523231
ENSG00000181264TMEM1363no signal111201958381202043911
ENSG000002595413no signal11120120468120136641-1
ENSG00000149403GRIK43no signal111203824681208596131
ENSG00000253035RNU4ATAC5P3no signal111223221821223223071
ENSG00000254572GLULP33no signal11122484152122485194-1
ENSG000002390793no signal11122596916122597019-1
ENSG00000109944C11orf633no signal111227533911228305061
ENSG00000109971HSPA83no signal11122928197122933938-1
ENSG000002546673no signal111233010581233064271
ENSG00000255414LINC010593no signal111233251061233311181
ENSG000002554403no signal1174120105741274241
ENSG00000223202RN7SKP2973no signal1174396269743965501
ENSG00000054938CHRDL23no signal117440747474442430-1
ENSG000002276153no signal117445676174457159-1
ENSG00000255460ZDHHC20P33no signal117493936774939702-1
ENSG00000207445SNORD15B3no signal1175115465751156101
ENSG000002549753no signal1176386123764142391
ENSG00000149269PAK13no signal117703275277185680-1
ENSG000002195293no signal117752436577524722-1
ENSG000002544593no signal117754070077583308-1
ENSG000002546753no signal1177733979777347671
ENSG00000033327GAB23no signal117792634378129394-1
ENSG000002544203no signal1178035804781550951
ENSG00000266570MIR55793no signal117913321379133270-1
ENSG000002544713no signal1179698556797006731
ENSG00000182103FAM181B3no signal118244305382444906-1
ENSG000002553823no signal1182502704825281881
ENSG00000165490C11orf823no signal1182611017826693191
ENSG000002546983no signal118267472382750157-1
ENSG000002545223no signal118275184882752445-1
ENSG000002699393no signal118289656382898078-1
ENSG000002555413no signal1182920441829206761
ENSG000002552343no signal1182997171831345591
ENSG00000200877RNU6-560P3no signal1185864269858643761
ENSG00000254727PTP4A1P63no signal1186143140861436171
ENSG00000149201CCDC813no signal1186085778861341511
ENSG00000254748HNRNPCP83no signal1186735625867368191
ENSG00000199235RNU6-1063P3no signal118735938187359441-1
ENSG000002551833no signal118742924687430303-1
ENSG00000207113RNU6-16P3no signal118834597388346079-1
ENSG00000086991NOX43no signal118905752489322779-1
ENSG000002554863no signal118945665089460421-1
ENSG000002555403no signal1189464185894679501
ENSG000002551703no signal1189498052894983061
ENSG000002546173no signal1189620534896231591
ENSG000002548033no signal1189783113897834341
ENSG00000223709TRIM64EP3no signal118978914589796167-1
ENSG00000255009UBTFL13no signal1189819081898202991
ENSG000002143913no signal1190015728900173401
ENSG000002231013no signal1190057944900580521
ENSG00000244244RPS3AP423no signal119223131892232101-1
ENSG000002551273no signal1192647768926497571
ENSG00000134640MTNR1B3no signal1192702886927182321
ENSG000002554453no signal1192885241928859161
ENSG000002341063no signal1193268634932689821
ENSG00000207112SNORA253no signal119346367993463812-1
ENSG00000206834SNORA13no signal119346517093465299-1
ENSG00000182919C11orf543no signal1193474757934979151
ENSG00000181333HEPHL13no signal1193754527938469171
ENSG00000166025AMOTL13no signal1194439597946099181
ENSG000002567793no signal1194770646947716201
ENSG000002503903no signal1195215570952307171
ENSG00000266192MIR1260B3no signal1196074602960746901
ENSG00000200411RNA5SP3463no signal119620773696207856-1
ENSG000002666163no signal119929566999295736-1
ENSG00000187151ANGPTL53no signal11101761405101787253-1
ENSG000002526793no signal111019276941019277481
ENSG000002391543no signal11101929036101929139-1
ENSG00000212466RNU6-952P3no signal111021844531021845601
ENSG00000023445BIRC33no signal111021882151022101341
ENSG000002554823no signal111023379861023695321
ENSG00000137674MMP203no signal11102447566102496063-1
ENSG000002398613no signal111029159661029164411
ENSG000002609663no signal11102921416102926528-1
ENSG00000162194C11orf483no signal116243028762439727-1
ENSG00000177363LRRN4CL3no signal116245387462457371-1
ENSG00000133316WDR743no signal116259981462609281-1
ENSG00000149452SLC22A83no signal116275662662783311-1
ENSG00000168539CHRM13no signal116267615162689279-1
ENSG00000176485PLA2G163no signal116334066763384355-1
ENSG00000173511VEGFB3no signal1164002010640062591
ENSG00000173457PPP1R14B3no signal116401195664014413-1
ENSG000002570693no signal1164059194640722411
ENSG000002692903no signal116455239364553092-1
ENSG00000168070C11orf853no signal116470498964739557-1
ENSG00000222477RNU2-23P3no signal1164915055649152491
ENSG00000204710SPDYC3no signal1164937625649407151
ENSG00000014138POLA23no signal1165029233650730601
ENSG000002554783no signal1165134909651427701
ENSG00000251562MALAT13no signal1165265233652739401
ENSG00000260233SSSCA1-AS13no signal116533713165337744-1
ENSG00000254470AP5B13no signal116554336465548273-1
ENSG00000175315CST63no signal1165779312657809761
ENSG000002387523no signal1165820615658206991
ENSG000002451563no signal116603730366045996-1
ENSG000002554683no signal1166115421661322751
ENSG00000174576NPAS43no signal1166188475661941781
ENSG00000174547MRPL113no signal116620254666234209-1
ENSG000002545963no signal1166221705662220521
ENSG00000248746ACTN33no signal1166313866663308001
ENSG00000248643RBM14-RBM43no signal1166384097664139401
ENSG00000173898SPTBN23no signal116645271966496697-1
ENSG00000266423MIR31633no signal116670190566701977-1
ENSG00000173120KDM2A3no signal1166886740670255581
ENSG00000175482POLD43no signal116711824867124443-1
ENSG00000175634RPS6KB23no signal1167195931672028721
ENSG00000110711AIP3no signal1167250512672585741
ENSG00000167791CABP23no signal116728638367290899-1
ENSG00000254447OR7E11P3no signal116750307967504030-1
ENSG00000243672RPS3AP403no signal116769312267693902-1
ENSG000002546103no signal116770203467707245-1
ENSG000002550313no signal1167818207678212291
ENSG00000162337LRP53no signal1168080077682167431
ENSG00000254856NDUFA3P23no signal116825607768256308-1
ENSG000002505083no signal1168638132686420101
ENSG00000132740IGHMBP23no signal1168671310687080701
ENSG00000172935MRGPRF3no signal116877186368780877-1
ENSG000002556063no signal116925313369259511-1
ENSG000002547213no signal117005239770053496-1
ENSG00000263744MIR36643no signal117071837570718473-1
ENSG00000172890NADSYN13no signal1171164155712351531
ENSG00000184276DEFB108B3no signal1171544246715487561
ENSG00000228915OR7E128P3no signal1171604456716054791
ENSG00000149357LAMTOR13no signal117179694171814433-1
ENSG00000257075RPEP63no signal1171842328718429531
ENSG000002565183no signal1171869866718709051
ENSG00000110195FOLR13no signal1171900602719073451
ENSG000002282863no signal117196090071962332-1
ENSG000002558083no signal1172354281723704511
ENSG00000186635ARAP13no signal117239611472504644-1
ENSG00000256007ARAP1-AS13no signal1172396120724048531
ENSG000002570383no signal117301828073020406-1
ENSG00000110237ARHGEF173no signal1173019334730801361
ENSG00000054967RELT3no signal1173087309731085191
ENSG000002557863no signal1173163065731633891
ENSG000002560343no signal1173471608734721151
ENSG000002558473no signal117367470273681332-1
ENSG000002567233no signal117370601773707196-1
ENSG00000199077MIR129-23no signal1143602944436030331
ENSG000002546543no signal1144995453449995791
ENSG000002546643no signal114523736645256843-1
ENSG000002443133no signal114645016346450700-1
ENSG00000180423HARBI13no signal114662441146639459-1
ENSG00000212135SNORD673no signal114678393946784049-1
ENSG00000025434NR1H33no signal1147269851472903961
ENSG00000110514MADD3no signal1147290712473515821
ENSG000002659103no signal114740763347407733-1
ENSG00000165915SLC39A133no signal1147428683474380471
ENSG00000165916PSMC33no signal114744032047447993-1
ENSG00000252327RNU6-1302P3no signal114746155747461617-1
ENSG00000196666FAM180B3no signal1147608198476107461
ENSG00000109920FNBP43no signal114773807247788995-1
ENSG00000149177PTPRJ3no signal1148002113481896701
ENSG00000255297OR4A41P3no signal1148611312486122391
ENSG00000254674OR4A42P3no signal1148631615486325521
ENSG00000229361UBTFL73no signal1149103459491046491
ENSG000002553383no signal1149132308491327721
ENSG000002555323no signal1149327266494012211
ENSG000002262683no signal114945502549455990-1
ENSG000002551993no signal115006006350062069-1
ENSG000002550423no signal115024683250254505-1
ENSG000002555433no signal1155034884550351121
ENSG000002552833no signal115504692355052999-1
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