Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H28 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.8

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
31625286311626259961loss
31625131501625248590loss
Y949679795257450loss
410214160102314990loss
11060192061060223760loss
12963387197282930loss
Y20652874206570390loss
Y579670158956490loss
Y683463668583050loss
Y809502181353780loss
Y13914519139185980loss
Y15043770151899130loss
Y15683793157677820loss
Y23648442236532430loss
125593129256469470loss
Y21161231212014240loss
Y23766155237975600loss
Y793361979641650loss
Y19279765193478830loss
Y20804422208375530loss
Y16702334167334860loss
12487320332487952900loss
Y22914302230015410loss
Y24359931244357940loss
Y747222376531390loss
1681177706812752681loss
X54889070549040450loss
119395479194927070loss
341255224416221030loss
921976871220354800loss
928257665284415800loss
155724024557243000loss
11977470671977480670loss
Y18596847186340790loss
111250752881250837051loss
1211511578115434070loss
Y19389951194318980loss
Y553723656788100loss
Y638077764076910loss
Y850038485087480loss
Y875176688332260loss
Y890271493942671loss
Y939462094415350loss
Y966931096951870loss
Y14621264147510240loss
Y15235846153044260loss
Y15579215155915370loss
Y15907000159746760loss
Y16223071163889390loss
Y17038614170766520loss
Y17912965179340310loss
Y18556325185700060loss
Y21386138215423800loss
Y28459222284687690loss
Y28539283286062690loss

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000188399ANKRD36P10lossY28555962285666821
ENSG000002234220lossY754694075490691
ENSG00000234795RFTN1P10lossY75810267677302-1
ENSG000002282070lossY87692448771317-1
ENSG00000224408USP9YP221lossY902130390234121
ENSG00000232924TCEB1P41lossY906852490688561
ENSG00000188656TSPY7P1lossY921573192184801
ENSG000002700731lossY934520593477841
ENSG00000234803FAM197Y21lossY93552089364506-1
ENSG000002235170lossY1638809216389369-1
ENSG00000227949CYCSP460lossY1705342717053630-1
ENSG00000249606TRAPPC2P70lossY2081740620818076-1
ENSG00000242153OFD1P6Y0lossY20835919209010831
ENSG000002569750loss1296589439661036-1
ENSG000001733570lossY877426587841141
ENSG00000232808TTTY201lossY91674899172441-1
ENSG00000229549TSPY81lossY919540692184791
ENSG00000258992TSPY11lossY923607693073571
ENSG00000236424TSPY101lossY936548993682911
ENSG00000233774MED14P10lossY1473091514746333-1
ENSG00000235462TAB3P10lossY1526584215274125-1
ENSG000002662200lossY1636406516364171-1
ENSG000002515100lossY20653626207095841
ENSG00000235479RAB9AP40lossY20811557208121651
ENSG00000234529GAPDHP190lossY21489455214904591
ENSG00000224482HSFY4P0lossY2297066222973695-1
ENSG00000168038ULK40loss34128809042003922-1
ENSG00000240498CDKN2B-AS10loss921994777221210961
ENSG00000147883CDKN2B0loss92200290222009362-1
ENSG00000157828RPS4Y20lossY22918050229429181
ENSG00000238073RBMY2HP0lossY75397847544065-1
ENSG00000228383FAM197Y71lossY92054129235047-1
ENSG00000237802FAM197Y61lossY92257319233636-1
ENSG00000230066FAM197Y31lossY93348969342768-1
ENSG000002245180lossY17053626170545951
ENSG00000252766RNU6-255P0lossY2118086921180973-1
ENSG00000183310OR2T340loss1248737022248738080-1
ENSG000002016020loss1248758226248758334-1
ENSG00000183130OR2T110loss1248789420248790491-1
ENSG00000239893ZNF736P9Y0lossY79369377938764-1
ENSG00000232348LINC002790lossY850633585128831
ENSG00000232235CDY3P1lossY90036949005311-1
ENSG00000197038RBMY1A3P1lossY91487399160483-1
ENSG00000225560FAM197Y81lossY91851209193010-1
ENSG000002255161lossY92930129344176-1
ENSG00000236786TSPY15P1lossY938571793882901
ENSG000002326170lossY950283895066191
ENSG00000228518SURF6P10lossY19304706193055321
ENSG00000235175RPL26P370lossY56613415661778-1
ENSG00000225520TTTY160lossY75673987569288-1
ENSG000002717010loss12487647172487651701
ENSG000002720840loss11939860419402005-1
ENSG00000224183SDHDP60loss12562065525621134-1
ENSG00000233843CYCSP480lossY28546758285473771
ENSG00000232620TSPY17P0lossY638850463889701
ENSG00000236435TSPY12P0lossY75557807557589-1
ENSG000002366900lossY755855275607191
ENSG00000225809RBMY2KP0lossY81324908145229-1
ENSG00000233803TSPY41lossY917507391778931
ENSG00000224336FAM197Y11lossY93742419384693-1
ENSG000002660980loss11941004619410145-1
ENSG000002666330loss12969956496996331
ENSG00000127481UBR40loss11940100019536770-1
ENSG00000187010RHD0loss125598884256569361
ENSG00000215221UBA52P60loss922012154220125351
ENSG000002664460loss921995481219960121
ENSG00000226863SHROOM2P10lossY14649708146568181
ENSG00000271123TCEB1P50lossY2379356923793901-1
ENSG00000238074TSPY6P1lossY932492293276891
ENSG00000135697BCMO11loss1681272053813247471
ENSG00000238154USP9YP41lossY90272389042220-1
ENSG00000228927TSPY31lossY923603093073571
ENSG00000184022OR2T100loss1248756052248757100-1