Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H28 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.8
Chromosome Average Copy Number: 3.98

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
9377471506354no signal
9177058219687122no signal
921976871220354800loss
922037370282576622no signal
928257665284415800loss
928442343295585232no signal
929563427296435423no signal
929646438337236032no signal
933724812387679423no signal
938768084699780084no signal
9699780231157813185no signal
91157870411160626112no signal
91160633021161003685no signal
91161044051278010655no signal
91278013011287807925no signal
91287816291410913955no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000160360GPSM15no signal91392219321392540571
ENSG00000165689SDCCAG35no signal9139296377139305061-1
ENSG000002275125no signal91394373331394382871
ENSG000002728965no signal91396858311396950471
ENSG000002135905no signal91398302921398316131
ENSG000002601905no signal9139831621139832440-1
ENSG00000186193SAPCD25no signal9139956581139965040-1
ENSG00000197355UAP1L15no signal91399719531399789911
ENSG00000176058TPRN5no signal9140086069140098645-1
ENSG00000188566NDOR15no signal91401001471401114611
ENSG00000188229TUBB4B5no signal91401356651401381591
ENSG00000197768C9orf1735no signal91401457131401479341
ENSG00000198113TOR4A5no signal91401722011401770931
ENSG00000187609EXD35no signal9140201348140317714-1
ENSG00000148399DPH75no signal9140449356140473387-1
ENSG00000228623ZNF8835no signal9115759495115774507-1
ENSG00000119431HDHD35no signal9116135699116139279-1
ENSG000002115565no signal9116554638116554719-1
ENSG000002722415no signal91173788271173788951
ENSG00000182752PAPPA5no signal91189160831191646011
ENSG00000207268SNORA70C5no signal9119943345119943479-1
ENSG000002335165no signal9120224572120228538-1
ENSG000002285125no signal91205457261206303491
ENSG000002250505no signal9121450030121468238-1
ENSG00000136861CDK5RAP25no signal9123151147123342448-1
ENSG00000119403PHF195no signal9123617977123639606-1
ENSG00000119396RAB145no signal9123940415123985292-1
ENSG00000235865GSN-AS15no signal9124043046124047808-1
ENSG00000148175STOM5no signal9124101355124132531-1
ENSG00000171484OR1B15no signal9125390858125391852-1
ENSG00000233425KRT18P675no signal91255998361256010991
ENSG00000207991MIR6015no signal9126164804126164882-1
ENSG000002291155no signal91265214991265220541
ENSG000002317445no signal9127360986127361859-1
ENSG00000241246RN7SL302P5no signal91273694381273697351
ENSG00000136918WDR385no signal91276157551276201601
ENSG00000173611SCAI5no signal9127704887127905785-1
ENSG000001777365no signal9127730573127731223-1
ENSG00000044574HSPA55no signal9127997132128003609-1
ENSG00000243845RN7SL30P5no signal9128275183128275486-1
ENSG00000214761HNRNPA1P155no signal91283579481283589071
ENSG000002324135no signal91288198591289218921
ENSG00000253079NRON5no signal9129170320129170689-1
ENSG00000169155ZBTB435no signal91295672851296004891
ENSG00000136828RALGPS15no signal91296770531299854451
ENSG00000160401C9orf1175no signal91304692681304782811
ENSG00000106992AK15no signal9130628759130640022-1
ENSG000002212975no signal9131019986131020068-1
ENSG000002682115no signal91310623671310642121
ENSG000002726965no signal91310786161310791881
ENSG000002725935no signal91311537401311542951
ENSG00000119335SET5no signal91314457031314586791
ENSG00000160447PKN35no signal91314648021314831971
ENSG00000264438RN7SL560P5no signal91314720591314723181
ENSG00000198917C9orf1145no signal9131581930131592100-1
ENSG00000175287PHYHD15no signal91316831741317043201
ENSG00000095321CRAT5no signal9131857089131873468-1
ENSG00000119383PPP2R45no signal91318732291319112251
ENSG00000188483IER5L5no signal9131937835131940540-1
ENSG000002680505no signal91319380861319398541
ENSG000002642985no signal91322408351322409311
ENSG00000167157PRRX25no signal91324279201324848751
ENSG000002249885no signal9132645972132646449-1
ENSG000002707555no signal91328069921328073601
ENSG00000130707ASS15no signal91333203161333766611
ENSG000002247975no signal9133600173133600437-1
ENSG00000130717UCK15no signal9134399188134406655-1
ENSG00000196358NTNG25no signal91350373341351199211
ENSG000002349075no signal91358378981358380541
ENSG000002300645no signal91362058271362063021
ENSG00000123454DBH5no signal91365014821365244661
ENSG00000186350RXRA5no signal91372089441373324311
ENSG00000265848MIR3689D15no signal9137741455137741528-1
ENSG00000264136MIR3689D25no signal9137742123137742202-1
ENSG000002364035no signal91378289971378350411
ENSG00000160349LCN15no signal91384132841384183781
ENSG000002373395no signal91384667811384789581
ENSG000002365435no signal91385061421385073541
ENSG00000130559CAMSAP15no signal9138700333138799074-1
ENSG00000263967MIR42905no signal99278572392785817-1
ENSG00000225072OR7E116P5no signal992994467929954231
ENSG000002296135no signal99322580693345026-1
ENSG000002301475no signal99393186793932327-1
ENSG000002733815no signal99396845793972581-1
ENSG00000148090AUH5no signal99397609794124195-1
ENSG00000165030NFIL35no signal99417132794186144-1
ENSG000002273995no signal994768344947688261
ENSG000002361155no signal994967638949724401
ENSG00000188312CENPP5no signal995087766953828151
ENSG00000106823ECM25no signal99525636595298937-1
ENSG00000127080IPPK5no signal99537546695432547-1
ENSG00000187984ANKRD19P5no signal995571670956509751
ENSG00000232843SNX18P25no signal99565598095656787-1
ENSG00000127084FGD35no signal995709733957985181
ENSG00000157303SUSD35no signal995820989958474201
ENSG000002234465no signal99585722195857811-1
ENSG00000165233C9orf895no signal995858500958755651
ENSG000002276035no signal99619761496199403-1
ENSG000002356015no signal996717879967214221
ENSG00000230262MIRLET7DHG5no signal99693888496966850-1
ENSG000002387925no signal996995760969958631
ENSG00000202445RNU6-669P5no signal997270020972701261
ENSG00000207864MIR27B5no signal997847727978478231
ENSG000002302215no signal998054620980570921
ENSG000002713845no signal99816927298169944-1
ENSG00000130958SLC35D25no signal99908298899145992-1
ENSG000002382515no signal999169566991700791
ENSG00000081377CDC14B5no signal99925252399382112-1
ENSG000002338205no signal999488172994897511
ENSG000002289575no signal9100148522100158394-1
ENSG000002704125no signal9101705619101706057-1
ENSG00000106799TGFBR15no signal91018663201019164741
ENSG000002272695no signal91019456551019471731
ENSG00000106803SEC61B5no signal91019843461019928971
ENSG00000066697MSANTD35no signal91031894381032135111
ENSG00000227411BAATP15no signal9104096366104101629-1
ENSG000002253765no signal91042307211042437841
ENSG00000238882RNU6-329P5no signal91050188861050189921
ENSG000002221175no signal91050576591050577461
ENSG000002359015no signal91052774861052805901
ENSG000002703325no signal9106842305106855354-1
ENSG00000237443OR13D2P5no signal91073523251073532311
ENSG00000165028NIPSNAP3B5no signal91075264381075397381
ENSG000002263345no signal91076898341076911731
ENSG00000106701FSD1L5no signal91082100771083147141
ENSG000002292975no signal9109346423109354233-1
ENSG000002255315no signal91098791101098798381
ENSG000002146455no signal9110539471110540419-1
ENSG00000222558RNU6-1064P5no signal9110560025110560128-1
ENSG00000237360CHCHD4P25no signal9110859712110860131-1
ENSG000001692535no signal91113891131113894301
ENSG00000148156ACTL7B5no signal9111616871111619239-1
ENSG00000260230FRRS1L5no signal9111892573111929571-1
ENSG000002073295no signal91120869651120870761
ENSG00000243444PALM25no signal91124030681127137551
ENSG000002280535no signal9112787161112787638-1
ENSG00000206658RNU6-1039P5no signal9113131872113131978-1
ENSG00000030304MUSK5no signal91134310511135638591
ENSG00000173258ZNF4835no signal91142874391143401241
ENSG00000059769DNAJC255no signal91143936321144325081
ENSG00000242616GNG105no signal91144236151144325261
ENSG000002255135no signal9114935802114936251-1
ENSG00000165188RNF1832no signal9116059373116065656-1
ENSG00000265605RN7SL422P4no signal940516806405170641
ENSG00000231757FAM74A24no signal94130613341311985-1
ENSG00000204828FOXD4L24no signal942717234427203421
ENSG000002313914no signal941313945413231791
ENSG00000225433MTND1P124no signal942779843427799981
ENSG00000230455BMS1P144no signal942808660428122741
ENSG00000233244CYP4F59P4no signal94302774843032877-1
ENSG00000238415RNU6-538P4no signal94312279943122905-1
ENSG000002330744no signal94314053743142739-1
ENSG00000234344MEP1AP34no signal943162901431690241
ENSG000001978054no signal943313699433145021
ENSG000002694744no signal94342571343427044-1
ENSG000002290794no signal944011053440118391
ENSG00000154529CNTNAP3B4no signal943684902439240491
ENSG000002687084no signal94432591644326077-1
ENSG000002312484no signal944823714448355211
ENSG000002315274no signal945108392451125321
ENSG000001870604no signal945562979455635761
ENSG000002275694no signal94565624145656586-1
ENSG000001848794no signal94573344145734160-1
ENSG000002282434no signal945949232459498231
ENSG000002347254no signal94612100646121348-1
ENSG000002048134no signal946387012463872221
ENSG000002314814no signal94635924246380257-1
ENSG000002312124no signal94666124246662837-1
ENSG000002354964no signal965496525654969241
ENSG000002234494no signal966061968660624631
ENSG000002423014no signal96608197266083332-1
ENSG000002275824no signal96651669766520781-1
ENSG000002196934no signal966544359665457451
ENSG000002289914no signal96669327766721073-1
ENSG000002334344no signal96792479167925210-1
ENSG00000196774ANKRD20A14no signal967926761679698401
ENSG00000238397RNU6-368P4no signal967937393679374991
ENSG00000239684PTGER4P34no signal96837162668371877-1
ENSG000002155484no signal96842786168455375-1
ENSG00000204794PGM5P14no signal96874123468809906-1
ENSG000002339614no signal969065655690849891
ENSG000002390284no signal96982176069821841-1
ENSG00000181778TMEM2525no signal97115149671155783-1
ENSG000002240255no signal971224041712269001
ENSG00000119139TJP25no signal971736209718701241
ENSG00000135063FAM189A25no signal971939488720073711
ENSG000002438885no signal97204316472043637-1
ENSG000002239665no signal973340956733457721
ENSG00000224437PIGUP15no signal97353191373532417-1
ENSG000002259475no signal975085290750859921
ENSG000002384025no signal975142152751422551
ENSG000002368495no signal97548664475489025-1
ENSG00000135002RFK5no signal97900043379009433-1
ENSG00000197969VPS13A5no signal979792269800364571
ENSG00000201711RNU6-1303P5no signal98025011980250225-1
ENSG00000196781TLE15no signal98419859884304220-1
ENSG00000186788SPATA31D35no signal984558474845650091
ENSG00000240632SPATA31D5P5no signal984528352845348411
ENSG00000237770SPATA31D2P5no signal984583753845869851
ENSG00000226590UBE2V1P105no signal987774597877748651
ENSG00000187753C9orf1535no signal98883518088874572-1
ENSG000002322115no signal989247062893114111
ENSG00000188029CTSL3P5no signal990387368904017991
ENSG00000177910SPATA31C25no signal99074422090753361-1
ENSG000002044295no signal990795588907963621
ENSG000002249455no signal99170351991724849-1
ENSG00000130222GADD45G5no signal992219928922214701
ENSG000002371582no signal9656884465693601
ENSG00000266863RN7SL123P2no signal9666165166619361
ENSG000002290572no signal9666242466637921
ENSG000002296112no signal9670447167077801
ENSG000002354482no signal91270010012814344-1
ENSG00000229268PES1P22no signal913986174139879081
ENSG000002290292no signal914593575145941981
ENSG00000175893ZDHHC212no signal91461106914693469-1
ENSG00000214110LDHAP42no signal91492133514922332-1
ENSG000002342972no signal915055055150560501
ENSG00000213362FTH1P122no signal91552713115527681-1
ENSG000002371532no signal917048917171128131
ENSG000002368572no signal91871797218718524-1
ENSG00000155875FAM154A2no signal91892765619033251-1
ENSG000002321762no signal91920033319201044-1
ENSG000002329782no signal91929133519292574-1
ENSG000002707122no signal91995739219958145-1
ENSG00000207609MIR4912no signal920716104207161871
ENSG00000214042IFNA72no signal92120146821202204-1
ENSG00000223684IFNWP182no signal92120918821209778-1
ENSG00000233816IFNA132no signal92136737121368075-1
ENSG00000199177MIR312no signal92151211421512184-1
ENSG000002274432no signal921638284216386751
ENSG00000099810MTAP2no signal921802542219316461
ENSG000002369212no signal92220398922214671-1
ENSG00000198680TUSC12no signal92567639625678856-1
ENSG000002664292no signal92661403826614123-1
ENSG000002534002no signal926801731268058601
ENSG000002377342no signal927391732273975611
ENSG000002300972no signal92982474029826709-1
ENSG00000252313RNA5SP2812no signal932293556322936901
ENSG000002308672no signal93272706732727520-1
ENSG000002367962no signal93283657332869593-1
ENSG00000237437ASS1P122no signal932945994329472201
ENSG00000086062B4GALT12no signal93310408033167354-1
ENSG00000165271NOL62no signal93346143933473928-1
ENSG000002268232no signal93350365333510709-1
ENSG000002273012no signal933719688337225531
ENSG00000010438PRSS33no signal933750515337992301
ENSG000002008343no signal933830976338310761
ENSG000002309253no signal93390960733911120-1
ENSG00000137073UBAP23no signal93392169134048947-1
ENSG00000252164RNA5SP2823no signal93420613234206239-1
ENSG000002587283no signal934646642346571101
ENSG00000137077CCL213no signal93470900234710121-1
ENSG00000221829FANCG3no signal93507383235080013-1
ENSG00000244213ZFAND6P13no signal935449745354503491
ENSG00000137076TLN13no signal93569694535732392-1
ENSG000002288433no signal93575670935757937-1
ENSG00000168828OR13J13no signal93586937535870461-1
ENSG000002315183no signal935930009359371481
ENSG00000264922MIR45403no signal93686425136864305-1
ENSG00000265368MIR44763no signal93689345936893528-1
ENSG000002160703no signal93729602037296101-1
ENSG000001879883no signal937477146374783141
ENSG000002569663no signal93751254437592466-1
ENSG00000201287RN7SKP1713no signal93766174437662046-1
ENSG00000233111RAB1C3no signal93763668537637290-1
ENSG00000226055PAICSP13no signal937878113378794901
ENSG000002237163no signal938360424383764271
ENSG00000237487VN1R48P3no signal93850444438505479-1
ENSG000002415364no signal939485380394858661
ENSG00000225597FAM74A14no signal939900346399062191
ENSG000002279214no signal940028620400324171
ENSG000002318084no signal9112716113754-1
ENSG000002279142no signal9673478685555-1
ENSG00000202383RNA5SP2792no signal9133383713339531
ENSG000002240922no signal919777841978547-1
ENSG00000222973RNU2-25P2no signal921627632162953-1
ENSG000002364042no signal924227022641395-1
ENSG00000080608KIAA00202no signal927204692844241-1
ENSG00000227835CARM1P12no signal929070733053408-1
ENSG000002359172no signal9509834150993251
ENSG000002280972no signal9509956051002291
ENSG00000120211INSL42no signal9523141952353041
ENSG00000107014RLN22no signal952998685304969-1
ENSG00000107036KIAA14322no signal9562902557765571
ENSG000002338462no signal9627866762791531
ENSG00000264530RN7SL25P2no signal9654209465423501
ENSG00000054179ENTPD25no signal9139942550139948497-1
ENSG000002292575no signal91399521151399569131
ENSG000001994115no signal91399887971399888821
ENSG000002388245no signal9140017961140018060-1
ENSG000002617935no signal9140063306140066436-1
ENSG00000184709LRRC265no signal9140063210140064503-1
ENSG00000176248ANAPC25no signal9140069236140082989-1
ENSG00000188747NOXA15no signal91403178021403288581
ENSG00000130653PNPLA75no signal9140354404140444986-1
ENSG000002639335no signal91404402001404402851
ENSG00000182154MRPL415no signal91404456511404470071
ENSG00000148408CACNA1B5no signal91407722411410190761
ENSG00000203993C9orf375no signal9140509784140513358-1
ENSG000002299265no signal91410315471410383161
ENSG000002360245no signal9132475175132480914-1
ENSG00000148344PTGES5no signal9132500610132515326-1
ENSG00000136816TOR1B5no signal91325654321325735601
ENSG00000148358GPR1075no signal91328157051329024481
ENSG00000264169RN7SL665P5no signal91332756531332759501
ENSG000001969795no signal9132902889132906498-1
ENSG00000050555LAMC35no signal91338844691339698601
ENSG00000126878AIF1L5no signal91339718631339985391
ENSG000002369865no signal9134008252134042892-1
ENSG000002269875no signal91341160741341171111
ENSG00000126882FAM78A5no signal9134133463134151934-1
ENSG00000240853RN7SL328P5no signal9134600556134600854-1
ENSG000002302895no signal9134391945134397616-1
ENSG00000125492BARHL15no signal91354575721354656531
ENSG000002338005no signal91358224561358269431
ENSG00000238558RNU7-21P5no signal91358391191358391801
ENSG00000160271RALGDS5no signal9135973107136039301-1
ENSG00000148288GBGT15no signal9136028340136039332-1
ENSG000002718755no signal9136125788136130950-1
ENSG00000204031LCN1P25no signal91361846291361853041
ENSG00000148296SURF65no signal9136197552136203235-1
ENSG00000148248SURF45no signal9136228325136242970-1
ENSG00000160326SLC2A65no signal9136336217136344259-1
ENSG00000187616TMEM8C5no signal9136379708136393734-1
ENSG000002610185no signal9136476920136498221-1
ENSG00000123453SARDH5no signal9136528682136605077-1
ENSG000002562255no signal9136627017136628425-1
ENSG00000235106LINC000945no signal91368905611368997881
ENSG00000169925BRD35no signal9136895427136933657-1
ENSG00000196363WDR55no signal91370004871370250931
ENSG000002652865no signal9137741021137741098-1
ENSG00000266514MIR3689F5no signal9137742588137742653-1
ENSG00000160339FCN25no signal91377726541377799241
ENSG000002339365no signal9138137542138144554-1
ENSG00000196422PPP1R265no signal91383709251383807391
ENSG00000122140MRPS25no signal91383918301383965191
ENSG00000122136OBP2A5no signal91384379851384418151
ENSG00000204007GLT6D15no signal9138515502138531386-1
ENSG00000165643SOHLH15no signal9138585253138591374-1
ENSG000002380585no signal91387996581388053591
ENSG00000130560UBAC15no signal9138824815138853226-1
ENSG00000148411NACC25no signal9138898383138987131-1
ENSG000002601935no signal9138999654139001270-1
ENSG00000213221DNLZ5no signal9139253932139258241-1
ENSG00000187796CARD95no signal9139256355139268133-1
ENSG00000165684SNAPC45no signal9139270029139293249-1
ENSG00000165688PMPCA5no signal91393051101393182131
ENSG00000148396SEC16A5no signal9139334549139372141-1
ENSG00000196366C9orf1635no signal91393779471393805181
ENSG00000148400NOTCH15no signal9139388896139440314-1
ENSG00000233016SNHG75no signal9139615818139622636-1
ENSG00000187922LCN105no signal9139632619139637808-1
ENSG00000267206LCN65no signal9139638463139642980-1
ENSG00000232434C9orf1725no signal91397388671397417971
ENSG00000127191TRAF25no signal91397763641398210591
ENSG00000107223EDF15no signal9139756571139760738-1
ENSG00000266507MIR44795no signal91397811851397812551
ENSG00000159069FBXW55no signal9139834887139839148-1
ENSG000002382685no signal91398695461398714331
ENSG00000107317PTGDS5no signal91398719561398798871
ENSG00000214402LCNL15no signal91398763561398808621
ENSG000002351175no signal91399314921399324071
ENSG00000107331ABCA25no signal9139901686139923367-1
ENSG00000107281NPDC15no signal9139933922139940655-1
ENSG000002287145no signal9118501942118506518-1
ENSG00000204148LINC004745no signal9118650448118687486-1
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