Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H28 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.8
Chromosome Average Copy Number: 3.37

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
1660778340112844no signal
1634012169479739643no signal
1647974580728936973no signal
1672894749734392333no signal
1673439355811703913no signal
1681177706812752681loss
1681275401814298343no signal
1681431713902875363no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG000002616733no signal167225846472259043-1
ENSG00000261764KRT18P183no signal1672762515727637931
ENSG000002585823no signal1673517216735216431
ENSG000002608483no signal1673577840735924211
ENSG000002614043no signal167408805074330660-1
ENSG00000103035PSMD73no signal1674330673743401861
ENSG000002408613no signal1674586149745866441
ENSG000002629043no signal1674701404747026041
ENSG000002636613no signal1674781109747812091
ENSG00000168925CTRB13no signal1675252898752588221
ENSG00000050820BCAR13no signal167526292875301951-1
ENSG00000166822TMEM170A3no signal167547695275499395-1
ENSG000002625833no signal167553368675550178-1
ENSG000002609833no signal167626228376296263-1
ENSG00000244485RPL18P133no signal167626895376269521-1
ENSG00000226348VN2R10P3no signal1677254303772551551
ENSG000002609223no signal1677268774773248311
ENSG000002607013no signal1677467279774782331
ENSG000002212263no signal1677744198777442811
ENSG00000140876NUDT73no signal1677756411777761571
ENSG00000171724VAT1L3no signal1677822427780140041
ENSG000002608163no signal1678931062789335411
ENSG000002613763no signal1680213026802145791
ENSG000002610613no signal1681064375810650901
ENSG000002604953no signal168134433681347028-1
ENSG00000273048MIR47203no signal1681418623814186981
ENSG00000086696HSD17B23no signal1682068609821321391
ENSG000002612353no signal168207794182173236-1
ENSG00000263785MIR31823no signal1683541951835420131
ENSG00000103175WFDC13no signal1684328252843634501
ENSG00000153789FAM92B3no signal168513196585146114-1
ENSG00000270313COX6CP163no signal168531242685312641-1
ENSG00000266307MIR50933no signal168533983285339931-1
ENSG00000263968RN7SL381P3no signal1685692984856932791
ENSG000001999493no signal168630903686309129-1
ENSG00000268388FENDRR3no signal168650813586542705-1
ENSG000002436973no signal1686559063865598581
ENSG00000103248MTHFSD3no signal168656378286588841-1
ENSG000002603873no signal168666993486670751-1
ENSG000002607953no signal168693978186940078-1
ENSG000002616973no signal168729636587326044-1
ENSG00000103264FBXO313no signal168736059387425748-1
ENSG000002607503no signal1687526161875492411
ENSG000002261803no signal168772714487729753-1
ENSG00000104731KLHDC43no signal168773009187799598-1
ENSG00000179588ZFPM13no signal1688519725886034241
ENSG00000158545ZC3H183no signal1688636789886983741
ENSG000002598133no signal1688762909887650181
ENSG000002598813no signal1688947446889535441
ENSG000002612263no signal168900318789006059-1
ENSG00000167522ANKRD113no signal168933403889556969-1
ENSG00000252887RNU6-430P3no signal1689509726895098321
ENSG00000252579RNU7-117P3no signal168959992489599962-1
ENSG000002602593no signal168974902889752977-1
ENSG000002563903no signal1689985273899873751
ENSG00000103449SALL13no signal165116988651185278-1
ENSG00000261190C16orf973no signal165203939952112386-1
ENSG00000260268LINC009193no signal165211697752119021-1
ENSG000002608873no signal1652292476523142111
ENSG00000177200CHD93no signal1653088945533630621
ENSG000002610563no signal1653332136533337041
ENSG000002616303no signal165401514154015824-1
ENSG00000260936FTO-IT13no signal1654073305540746381
ENSG000002640793no signal165458321554583308-1
ENSG00000245694CRNDE3no signal165495277554963101-1
ENSG000002632073no signal1655366267553668791
ENSG00000087253LPCAT23no signal1655542910556205821
ENSG000002606213no signal1656443232564455951
ENSG00000255986MT1JP3no signal1656669651566709981
ENSG00000205358MT1H3no signal1656703726567050411
ENSG00000243988RPS24P173no signal1656940446569408681
ENSG00000102931ARL2BP3no signal1657279010572875161
ENSG00000125170DOK43no signal165750586357521239-1
ENSG00000260828HMGB3P323no signal1657637049576376091
ENSG000002616333no signal165765594657665559-1
ENSG00000159648TEPP3no signal1658010339580220201
ENSG00000070761C16orf803no signal165814749658163354-1
ENSG00000070770CSNK2A23no signal165819181158231824-1
ENSG00000252271RNU6-1110P3no signal165841834658418446-1
ENSG00000207493SNORA463no signal165858240358582537-1
ENSG00000206952SNORA503no signal165859370058593835-1
ENSG00000260013APOOP53no signal165978836559788930-1
ENSG000002618073no signal1659889257600878751
ENSG000002611783no signal166095963760962445-1
ENSG000002385073no signal1662438155624382581
ENSG000002617433no signal1663402748634033601
ENSG000002598643no signal1663737387637375691
ENSG000002618183no signal1665614571656808501
ENSG00000246898LINC009203no signal1666442427664460381
ENSG00000166546BEAN13no signal1666461200665274321
ENSG00000166548TK23no signal166654190666586447-1
ENSG00000183723CMTM43no signal166664865366730610-1
ENSG000002581223no signal166687533666887351-1
ENSG00000172840PDP23no signal1666912492669296571
ENSG00000172831CES23no signal1666968347669789991
ENSG00000102878HSF43no signal1667197288672038481
ENSG00000196123KIAA0895L3no signal166720950567217943-1
ENSG00000179044EXOC3L13no signal166721826967224107-1
ENSG00000135723FHOD13no signal166726329067281561-1
ENSG000002632013no signal166804733968049814-1
ENSG000002599453no signal166757602667576866-1
ENSG000002621603no signal166825987268263048-1
ENSG00000241334RPL35AP333no signal166851114068511473-1
ENSG000002711293no signal166905976369060546-1
ENSG00000141076CIRH1A3no signal1669165194692650331
ENSG00000157315TMED63no signal166937715169385712-1
ENSG00000181019NQO13no signal166974089969760854-1
ENSG00000141101NOB13no signal166977577069788843-1
ENSG00000265230RN7SL407P3no signal167029807270298383-1
ENSG00000265648RN7SL279P3no signal1670309972703102511
ENSG000002605373no signal1670333097704001631
ENSG00000157350ST3GAL23no signal167041333870473140-1
ENSG00000189091SF3B33no signal1670557691706088201
ENSG00000132613MTSS1L3no signal167069510770719969-1
ENSG000002600153no signal167157373771575728-1
ENSG000002601853no signal1671688930716981151
ENSG00000102984ZNF8213no signal167189358371929239-1
ENSG000002633203no signal1671963914719651021
ENSG00000118557PMFBP13no signal167214605672210777-1
ENSG00000185905C16orf544no signal162975378429757327-1
ENSG00000174992ZG164no signal1629789561297930961
ENSG000002599524no signal162981781729819053-1
ENSG00000185928PAGR14no signal1629827285298419481
ENSG00000013364MVP4no signal1629831715298593551
ENSG00000149929HIRIP34no signal163000364530007757-1
ENSG000002613674no signal1630118996301218621
ENSG00000102882MAPK34no signal163012542630134827-1
ENSG00000213599SLX1A-SULT1A34no signal1630205213302156311
ENSG00000180035ZNF484no signal1630389427304114291
ENSG00000005844ITGAL4no signal1630483979305345061
ENSG000002604874no signal163049190930492667-1
ENSG00000169957ZNF7684no signal163053532530538142-1
ENSG00000156858PRR144no signal1630662038306677611
ENSG00000156873PHKG24no signal1630759591307724901
ENSG00000196118C16orf934no signal163076874430774031-1
ENSG000002600824no signal163083238930833431-1
ENSG00000260083MIR45194no signal1630886543309065411
ENSG00000099364FBXL194no signal1630934376309601041
ENSG00000167395ZNF6464no signal1631085743310955171
ENSG000002554394no signal163109476031106277-1
ENSG00000103507BCKDK4no signal1631117428311241101
ENSG00000140678ITGAX4no signal1631366455313943181
ENSG00000213547VN1R64P4no signal1631558126315590581
ENSG00000180663VN1R34no signal163181924731820165-1
ENSG00000261284RBM22P134no signal1631874954318761971
ENSG000002602184no signal1631975124319754001
ENSG000002611274no signal163230086832321876-1
ENSG000002606624no signal163247158732471683-1
ENSG00000261233ABCD1P34no signal163248637232489571-1
ENSG00000260644HERC2P54no signal1632752635327875171
ENSG000002606104no signal163294308932943890-1
ENSG000002609214no signal1633006858330080911
ENSG00000259997IGHV1OR16-44no signal1633013654330139421
ENSG000002604144no signal163316567333165796-1
ENSG00000261509TP53TG3B4no signal1633261515332647161
ENSG00000260518BMS1P84no signal163348949233500971-1
ENSG000002603124no signal163366040233661331-1
ENSG00000270318IGHV3OR16-114no signal163366136333661819-1
ENSG00000260781ARHGAP23P14no signal163370988633739634-1
ENSG000002612174no signal163379087333794018-1
ENSG000002615663no signal163425722234258621-1
ENSG000002628853no signal1634257710342581361
ENSG000002600733no signal163442706134430032-1
ENSG000002610463no signal1634787280347883721
ENSG00000252094RNA5SP4103no signal1634980360349804651
ENSG00000251760RNA5SP4183no signal1634987197349873131
ENSG00000252936RNA5SP4233no signal1634989548349896561
ENSG000002606113no signal163501994035021258-1
ENSG000002215803no signal1635136344351364531
ENSG00000261084PPP1R1AP23no signal1635146491351468871
ENSG00000171241SHCBP13no signal164661446646655538-1
ENSG000002599833no signal1647047868470482761
ENSG00000102893PHKB3no signal1647495034477354341
ENSG00000259918NDUFA5P113no signal164763256547632907-1
ENSG000002390383no signal164869229248692396-1
ENSG000002599573no signal1649328797493306471
ENSG000002631103no signal1649488140494911801
ENSG000002657083no signal1649850596498506951
ENSG000002602983no signal165009206150093142-1
ENSG00000260031RPL10P143no signal165018519150185488-1
ENSG00000166164BRD73no signal165034739850402845-1
ENSG00000199771RNA5SP4263no signal165090336650903486-1
ENSG000002612413no signal1650918120509349621
ENSG000002604314no signal16525708952574401
ENSG000002671824no signal1653392015339410-1
ENSG000002603384no signal1656511705666197-1
ENSG000002611984no signal1676642327664994-1
ENSG000002603794no signal16855807185585871
ENSG00000183044ABAT4no signal16876842288784321
ENSG00000243954RN7SL743P4no signal16877711187774061
ENSG000002603504no signal1689415078942581-1
ENSG000002602764no signal16894196289542741
ENSG000002603494no signal1691996919201031-1
ENSG00000220793RPL21P1194no signal1692502199250761-1
ENSG000002646944no signal1694076929407761-1
ENSG000002632414no signal161081249010813619-1
ENSG000002619044no signal161081387210815321-1
ENSG00000182108DEXI4no signal161102274811036317-1
ENSG000002630134no signal161103274311033901-1
ENSG00000221801MIR548H24no signal161140029711400384-1
ENSG00000260224UBL5P44no signal161206236512062600-1
ENSG000002613944no signal161246083912466439-1
ENSG000002598764no signal161265021012651551-1
ENSG000002621164no signal161329146313298764-1
ENSG00000242307RPS26P524no signal161401618914016536-1
ENSG00000140694PARN4no signal161452955814726585-1
ENSG00000103512NOMO14no signal1614927538149900171
ENSG00000166780C16orf454no signal1615528152157188851
ENSG000002628484no signal161638399216386099-1
ENSG00000257366MIR3180-24no signal161640239916403857-1
ENSG00000264752RN7SL90P4no signal161673111216731387-1
ENSG000002614484no signal1617228361172325931
ENSG00000254681PKD1P54no signal161845814718495797-1
ENSG000002613574no signal1619077313190780161
ENSG00000167186COQ74no signal1619078921190914171
ENSG000002598714no signal1619326486193278481
ENSG000002606814no signal161942205119422984-1
ENSG00000006007GDE14no signal161951301519533467-1
ENSG000002619394no signal161983082619830950-1
ENSG000002678244no signal1620499024205009811
ENSG000002602774no signal162209457722103552-1
ENSG00000243716NPIPB54no signal1622490442225478421
ENSG00000122254HS3ST24no signal1622825498229276591
ENSG00000103404USP314no signal162307272723160591-1
ENSG00000168434COG74no signal162339981423464501-1
ENSG000002615834no signal1623723311237241141
ENSG00000006116CACNG34no signal1624266874243741221
ENSG000002600724no signal162448411924506498-1
ENSG00000122257RBBP64no signal1624549014245841841
ENSG00000140750ARHGAP174no signal162493070625026987-1
ENSG000002625874no signal1625043202250694301
ENSG000002633264no signal162508281125084048-1
ENSG00000199929RNA5SP4054no signal1626040233260403461
ENSG000002284804no signal162636611726369676-1
ENSG00000103522IL21R4no signal1627413483274621151
ENSG00000077235GTF3C14no signal162747087627561234-1
ENSG00000198156NPIPB64no signal162835387628374829-1
ENSG000002610894no signal1628425024284263391
ENSG00000188603CLN34no signal162847798328506896-1
ENSG00000176046NUPR14no signal162854860628550495-1
ENSG000002406344no signal162882530128825994-1
ENSG00000264455MIR47214no signal162885524028855328-1
ENSG00000178188SH2B14no signal1628857921288855261
ENSG00000196296ATP2A14no signal1628889726289158301
ENSG00000198106SNX29P24no signal1629262829295198171
ENSG00000254206NPIPB114no signal162939267529415350-1
ENSG000002575064no signal1629490200294939121
ENSG000002694824no signal161406291411001
ENSG000002253234no signal162186782193331
ENSG00000086506HBQ14no signal162304522311801
ENSG00000197562RAB40C4no signal166393576792721
ENSG000002282014no signal16698473699200-1
ENSG00000103260METRN4no signal167651157696551
ENSG00000207579MIR6624no signal168201838202771
ENSG00000162009SSTR54no signal16112275611314541
ENSG000002612944no signal1612565601257124-1
ENSG00000260284TPSP24no signal1613363521338838-1
ENSG00000007516BAIAP34no signal16138360213994391
ENSG000002604254no signal1614089011411406-1
ENSG00000197599CCDC1544no signal1614843841494557-1
ENSG00000103249CLCN74no signal1614949351525581-1
ENSG000002616414no signal16149534414965201
ENSG000002606464no signal16156298015646761
ENSG000002268904no signal1616756291676161-1
ENSG000002617324no signal16168226017367161
ENSG00000162032SPSB34no signal1618267131843701-1
ENSG00000263769RN7SL367P4no signal1619446861944937-1
ENSG00000140986RPL3L4no signal1619939752007607-1
ENSG00000183751TBL34no signal16202203820329341
ENSG00000167962ZNF5984no signal1620476552059824-1
ENSG00000065054SLC9A3R24no signal16207535720890271
ENSG00000008710PKD14no signal1621387112185899-1
ENSG00000221656MIR12254no signal1621401962140285-1
ENSG000002611234no signal1621448312147027-1
ENSG000002602604no signal1622047982205359-1
ENSG000001679704no signal16230373823123431
ENSG000002077154no signal1623177882317881-1
ENSG00000162068NTN34no signal16252150025241461
ENSG000002611404no signal1626190442621937-1
ENSG00000162073PAQR44no signal16301924630234901
ENSG00000262152LINC005144no signal16303896230445101
ENSG000002720794no signal16305612130573861
ENSG00000008517IL324no signal16311529831319081
ENSG00000085644ZNF2134no signal16317977831928061
ENSG000002624684no signal1642958264303790-1
ENSG00000153406NMRAL14no signal1645116814545764-1
ENSG000002614424no signal1646843304690624-1
ENSG00000168096ANKS34no signal1647465134784379-1
ENSG00000103199ZNF5004no signal1647982404817625-1
ENSG000002670774no signal1648452664846533-1
ENSG000002009804no signal1650017745001892-1
ENSG000002608824no signal1651281695128606-1
ENSG000002670704no signal16514874051925961
ENSG000002606433no signal168108727081121256-1
ENSG000002602293no signal168150962881510124-1
ENSG000002606823no signal1681993524819962981
ENSG00000184860SDR42E13no signal168203122182045093-1
ENSG000002636363no signal1682144658821447581
ENSG00000135698MPHOSPH63no signal168218140382203831-1
ENSG00000251888RN7SKP1903no signal168222611082226395-1
ENSG000002611763no signal168258765482608815-1
ENSG00000140945CDH133no signal1682660408838302041
ENSG000002608323no signal168298683583023903-1
ENSG000002605233no signal1683831266838342451
ENSG00000103154NECAB23no signal1684002237840363811
ENSG00000166558SLC38A83no signal168404327284076241-1
ENSG00000140943MBTPS13no signal168408736884150511-1
ENSG000002612433no signal1684529205845311011
ENSG00000103194USP103no signal1684733584848135281
ENSG00000135709KIAA05133no signal1685061375851278361
ENSG000002642033no signal168547502985475098-1
ENSG000002701243no signal168561361585617177-1
ENSG000002604173no signal1685625872856293261
ENSG00000131149GSE13no signal1685645015857098101
ENSG00000131153GINS23no signal168570980485723679-1
ENSG000002698983no signal1685776893857778311
ENSG000002706983no signal168584803185848668-1
ENSG000002698263no signal1686380993863832171
ENSG000002700203no signal168655398986557503-1
ENSG000002609443no signal168659875186601367-1
ENSG00000176692FOXC23no signal1686600857866025391
ENSG000002600263no signal168675429486755560-1
ENSG00000260456C16orf953no signal168711716887351022-1
ENSG000002613633no signal1687100311871033541
ENSG000002616513no signal1687249521872500581
ENSG000001311523no signal168733648287367879-1
ENSG000002699013no signal1687396142874010821
ENSG000002050473no signal168773174987739290-1
ENSG000002604983no signal168780709487812980-1
ENSG00000103257SLC7A53no signal168786362987903094-1
ENSG000002601773no signal168781374087840082-1
ENSG000002604663no signal1687870138878712691
ENSG000002606033no signal168792654487927291-1
ENSG00000172530BANP3no signal1687982850881109241
ENSG000002613273no signal168821090488219696-1
ENSG000002618163no signal168822509288227273-1
ENSG00000167508MVD3no signal168871834388729569-1
ENSG00000185669SNAI33no signal168874409088752901-1
ENSG000002248883no signal1688797588888078261
ENSG00000176715ACSF33no signal1689154783892222541
ENSG000002615463no signal168917958389181687-1
ENSG000002050153no signal1689232791892355551
ENSG00000129910CDH153no signal1689238175892619001
ENSG000002598773no signal168928163889284061-1
ENSG000002611183no signal168955842589570868-1
ENSG00000200084SNORD683no signal1689627842896279251
ENSG00000015413DPEP13no signal1689679716897048391
ENSG00000131165CHMP1A3no signal168971083989724253-1
ENSG000002590063no signal168998623589989070-1
ENSG00000141013GAS83no signal1690086037901113831
ENSG00000221819C16orf33no signal169009531690096309-1
ENSG00000126856PRDM73no signal169012297490158480-1
ENSG00000260528FAM157C3no signal1690168679902447521
ENSG000002605073no signal169017150390172724-1
ENSG00000222359RNU6-355P3no signal1690211000902111031
ENSG00000090861AARS3no signal167028619870323446-1
ENSG00000200153RNU6-23P3no signal167047919670479302-1
ENSG00000221066SNORD1113no signal1670571908705720011
ENSG000002600233no signal1670610204706115711
ENSG00000157368IL343no signal1670613798706945851
ENSG00000214353VAC14-AS13no signal1670789001708071541
ENSG00000103043VAC143no signal167072134270835064-1
ENSG00000157423HYDIN3no signal167084128171264625-1
ENSG00000221725RNU6ATAC25P3no signal1670886601708867171
ENSG000002598333no signal1671114769711275701
ENSG000002212373no signal1671365092713652021
ENSG00000172137CALB23no signal1671392616714243411
ENSG000002613483no signal167144434371460367-1
ENSG000002620083no signal167147695871477759-1
ENSG000002473243no signal1671496181714998441
ENSG000002605933no signal167165761171660719-1
ENSG00000199301RNU6-208P3no signal1671699994717001001
ENSG000002606123no signal1671760878717618951
ENSG00000166747AP1G13no signal167176291371843104-1
ENSG000002613373no signal167195281571959638-1
ENSG00000187008PKD1L33no signal167196344172033877-1
ENSG000002633113no signal167203813872038702-1
ENSG00000263232ATP5A1P33no signal167203893672040442-1
ENSG00000257017HP3no signal1672088491720949541
ENSG00000261701HPR3no signal1672088522721111451
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