Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H28 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.8
Chromosome Average Copy Number: 4

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
1319026950439249974no signal
1343925520443896544no signal
1344391936551478534no signal
1355157789575601854no signal
13575606941151083984no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000175198PCCA4no signal131007412691011826861
ENSG00000233532LINC004604no signal131070289111070305651
ENSG00000204442FAM155A4no signal13107820883108519083-1
ENSG00000236242MYO16-AS14no signal13109816250109853831-1
ENSG00000236053LINC010674no signal131099624831099641211
ENSG000002386294no signal131110665521110666531
ENSG00000153487ING14no signal131113650831113734211
ENSG000002000724no signal131127063921127064521
ENSG00000126226PCID24no signal13113831891113863029-1
ENSG00000225083GRTP1-AS14no signal131140059881140161831
ENSG00000150401DCUN1D24no signal13114110134114145267-1
ENSG00000202347RNU1-16P4no signal13114133230114133393-1
ENSG00000136146MED44no signal134862745948669267-1
ENSG00000136156ITM2B4no signal1348807294488370631
ENSG00000233456LINC010774no signal134914477549147453-1
ENSG000002655854no signal134950425649504348-1
ENSG00000223724RAD17P24no signal134961821549620930-1
ENSG00000231665OGFOD1P14no signal134978455849786430-1
ENSG00000136144RCBTB14no signal135010608250159719-1
ENSG00000222148RNY4P304no signal135046377050463864-1
ENSG00000204977TRIM134no signal1350570024505946171
ENSG00000136104RNASEH2B4no signal1351483814515445921
ENSG00000226792LINC003714no signal135165698451746524-1
ENSG000002701014no signal135193679551937579-1
ENSG00000236778INTS6-AS14no signal1352026503521265001
ENSG00000224892RPS4XP164no signal1352028300520354511
ENSG00000243406MRPS31P54no signal135274184452768600-1
ENSG00000136114THSD14no signal135295130552980629-1
ENSG00000136099PCDH84no signal135341810953422775-1
ENSG00000228319SPATA2P14no signal1356788507567910761
ENSG00000227151PRR20D4no signal1357734766577377871
ENSG00000223815DIAPH3-AS24no signal1360718832607276391
ENSG00000238213TARDBPP24no signal1360848910608501401
ENSG00000225249LINC003784no signal1361259333612686621
ENSG00000228669LINC004484no signal136324641863306492-1
ENSG00000227564LINC003764no signal136375723463801189-1
ENSG000002722994no signal136441142864412164-1
ENSG00000234767LINC010524no signal1366440306664523511
ENSG00000234527PCDH9-AS14no signal1366878003668976931
ENSG00000238500RNU7-87P4no signal136720484767204908-1
ENSG00000225263PCDH9-AS34no signal1367551564675599081
ENSG00000232380ZDHHC20P44no signal1369559190695601961
ENSG00000083520DIS34no signal137332954073356234-1
ENSG00000083535PIBF14no signal1373356197735905911
ENSG000002209814no signal1373425226734253071
ENSG00000206697RNY1P84no signal1373801284738013971
ENSG00000118922KLF124no signal137426022674708394-1
ENSG00000225944RIOK3P14no signal1375402690754042171
ENSG00000225203TBC1D4-AS14no signal137594964775951430-1
ENSG000002615534no signal1376123909763812561
ENSG000002284444no signal1376205407762062711
ENSG00000261206LINC005614no signal137650653176509268-1
ENSG00000233873RPL7P444no signal137755531077556051-1
ENSG00000102805CLN54no signal1377564795775766521
ENSG00000227922SPTLC1P54no signal1378233548782337991
ENSG00000152193RNF2194no signal137918842679233314-1
ENSG00000215357HSPD1P84no signal1379423366794253431
ENSG00000236277NIPA2P54no signal1379664918796682541
ENSG00000227354RBM26-AS14no signal1379980444799984631
ENSG00000102471NDFIP24no signal1380055287801302101
ENSG00000229175LINC003824no signal1380446721804920791
ENSG00000260094LINC005644no signal138180000081801118-1
ENSG000002293094no signal1381824573818765421
ENSG00000232447MTND5P34no signal1385095860850980501
ENSG00000232204TET1P14no signal138854242788544727-1
ENSG00000232225LINC010474no signal138986710189889144-1
ENSG00000225530SP3P4no signal139001341490015478-1
ENSG000002713954no signal1390203487902046431
ENSG00000231674LINC004104no signal139154320891578851-1
ENSG00000236520GPC6-AS14no signal139480644794840245-1
ENSG00000152749GPR1804no signal1395254157952868991
ENSG00000235768BRD7P54no signal139540970595411526-1
ENSG00000102595UGGT24no signal139645383496705736-1
ENSG000002521544no signal139761819597618268-1
ENSG00000233662CALM2P44no signal139929306899293493-1
ENSG00000260992DOCK9-AS24no signal1399740073997408791
ENSG00000150459SAP184no signal1321714653217232211
ENSG00000263607RN7SL80P4no signal132171633021716629-1
ENSG00000233405LINC010464no signal1321808707218093431
ENSG00000226525RPS7P104no signal132220255222203154-1
ENSG00000226722LINC004244no signal132244690922449705-1
ENSG000002295564no signal1323425912234282771
ENSG000002621984no signal1323492730234987411
ENSG00000207157RNY3P44no signal132372672523726825-1
ENSG000002731674no signal1324553839248951691
ENSG00000225404RPL26P344no signal132527847625278926-1
ENSG00000231417IRX1P14no signal1325316815253203221
ENSG00000234706PRUNEP14no signal132669168626693102-1
ENSG000002715594no signal132680346926803781-1
ENSG00000122035RASL11A4no signal1327844464278478271
ENSG00000169840GSX14no signal1328366780283689051
ENSG00000165556CDX24no signal132853627428545276-1
ENSG00000122025FLT34no signal132857741128674729-1
ENSG00000152520PAN34no signal1328712643288694751
ENSG000002216704no signal1329796699297967781
ENSG00000236758MTUS2-AS24no signal132981351629824691-1
ENSG00000223460GAPDHP694no signal1329880915298819221
ENSG00000122042UBL34no signal133033850830424821-1
ENSG00000236463LINC004274no signal133089049730894040-1
ENSG00000236094LINC005454no signal1331456688314575321
ENSG00000102802MEDAG4no signal1331480328314997091
ENSG00000235822LINC010734no signal1332559822325651341
ENSG000002122934no signal133299452732994653-1
ENSG00000229800ATP8A2P24no signal1333051411330529781
ENSG00000226968LINC004234no signal133345156933485788-1
ENSG000002279114no signal133390781633909414-1
ENSG00000232795SCAND3P14no signal1335759431357608161
ENSG00000133111RFXAP4no signal1337393361374032411
ENSG00000228825LAMTOR3P14no signal1337496676374970451
ENSG00000102710SUPT20H4no signal133758344937633850-1
ENSG000002211004no signal133760881437608929-1
ENSG00000202395RN7SKP14no signal133774048937740795-1
ENSG00000230283RPS12P244no signal133779499737795383-1
ENSG00000133107TRPC44no signal133821077338444562-1
ENSG00000199276RNA5SP264no signal133842898938429107-1
ENSG000002120494no signal1339364781393648911
ENSG00000120685PROSER14no signal133958400339612252-1
ENSG00000271429RPL17P514no signal134079876240798999-1
ENSG00000211491MIR320D14no signal134130196441302011-1
ENSG00000120690ELF14no signal134150605641635576-1
ENSG00000231404RAC1P34no signal134186187741862456-1
ENSG000002639074no signal1342019427420195031
ENSG00000264190MIR50064no signal134214242242142531-1
ENSG00000023516AKAP114no signal1342846289428973961
ENSG00000229546LINC004284no signal134341655043417023-1
ENSG00000120675DNAJC154no signal1343597339436830451
ENSG000002705224no signal1344361727443619881
ENSG00000233725LINC002844no signal1344482850446045971
ENSG000002307314no signal134480825444817328-1
ENSG00000237361LINC010714no signal134497438644980120-1
ENSG00000102804TSC22D14no signal134500765545151283-1
ENSG000002237324no signal134555621245657260-1
ENSG00000133114GPALPP14no signal1345563687456077461
ENSG00000223341RN7SKP34no signal1345634864456352211
ENSG00000180332KCTD44no signal134576698845775175-1
ENSG00000251015SLC25A30-AS14no signal1345992297459945061
ENSG00000235366LINC010554no signal134625522546256554-1
ENSG00000080618CPB24no signal134662732146679211-1
ENSG00000251106FAM206BP4no signal1346844212468447521
ENSG00000261097LINC005634no signal134687058046871979-1
ENSG00000270496BNIP3P74no signal1319066044190665591
ENSG00000229375USP24P14no signal131958962719593476-1
ENSG00000237636ANKRD26P34no signal131986473319918965-1
ENSG00000236834LINC004214no signal1319919189199208891
ENSG000002235764no signal1320415967204178121
ENSG00000237672KRR1P14no signal132064439020646276-1
ENSG00000121742GJB64no signal132079611020806534-1
ENSG000002036144no signal1321286570212882851
ENSG00000213621RPSAP544no signal1321535449215363341
ENSG00000231194FARP1-AS14no signal139908765999088094-1
ENSG00000229918DOCK9-AS14no signal1399484338994868831
ENSG00000207298RNU6-83P4no signal1399677488996775991
ENSG00000230871RPS6P234no signal1399825847998267441
ENSG00000234005GAPDHP224no signal139984283399843245-1
ENSG00000134882UBAC24no signal13998530281000386881
ENSG00000234303CLYBL-AS14no signal13100378501100379745-1
ENSG00000169508GPR1834no signal139994678499959659-1
ENSG000002012454no signal13100436111100436237-1
ENSG000002383054no signal13100436308100436411-1
ENSG00000139800ZIC54no signal13100615218100624163-1
ENSG00000225999NDUFA12P14no signal13100680023100680428-1
ENSG00000236860RPL39P294no signal13102915396102915552-1
ENSG00000261057LINC005554no signal13103241722103242163-1
ENSG00000243319FGF14-IT14no signal13102944677103046869-1
ENSG00000134900TPP24no signal131032493531033315211
ENSG000002699424no signal131033317761033323081
ENSG000002388694no signal131033741521033742551
ENSG00000175820CCDC1684no signal13103381801103389159-1
ENSG00000151287TEX304no signal13103418340103426161-1
ENSG000002725424no signal131035412081035421841
ENSG00000134897BIVM4no signal131034513991034938851
ENSG00000125255SLC10A24no signal13103696350103719196-1
ENSG00000225823RPL7P454no signal131054666781054674201
ENSG00000182346DAOA4no signal131061182161061433831
ENSG000002226434no signal131067807201067808371
ENSG00000174418RPL35P94no signal131070781211070784701
ENSG00000125266EFNB24no signal13107142079107187462-1
ENSG00000227590ATP5G1P54no signal131073157851073161951
ENSG000002213164no signal131077733811077734711
ENSG00000102524TNFSF13B4no signal131089035881089608321
ENSG00000229792LINC003994no signal131100530431100539881
ENSG00000185950IRS24no signal13110406184110438915-1
ENSG00000201161RN7SKP104no signal131105674431105677671
ENSG00000231428LINC003964no signal131107056321107072991
ENSG00000187498COL4A14no signal13110801318110959496-1
ENSG00000225239RPL21P1074no signal13111415021111415480-1
ENSG00000088448ANKRD104no signal13111530887111567416-1
ENSG00000225870LINC003684no signal131117481851117554441
ENSG00000102606ARHGEF74no signal131117669061119580841
ENSG000002043984no signal131122405481123249551
ENSG000002158814no signal131122483561122944261
ENSG00000223626LINC010444no signal13112976881112985539-1
ENSG00000126216TUBGCP34no signal13113139325113242481-1
ENSG00000197595C13orf354no signal131133013581133388111
ENSG00000235280MCF2L-AS14no signal13113621798113623138-1
ENSG00000126231PROZ4no signal131138129681138266941
ENSG000002691254no signal13113819316113819497-1
ENSG00000233613DCUN1D2-AS4no signal131141232161141304501
ENSG00000186009ATP4B4no signal13114303119114312501-1
ENSG000002376994no signal131145805811145823491
ENSG00000272695GAS6-AS24no signal131145671411145698061
ENSG00000229373LINC004524no signal131145866401146264851
ENSG00000232487RASA3-IT14no signal13114873044114874295-1
ENSG00000265450MIR45024no signal131150393031150393831
ENSG00000226158CLCP24no signal131150721211150725411
ENSG00000237534LINC003834no signal1369796478698662861
ENSG00000150361KLHL14no signal137027472670682591-1
ENSG00000207495RNY3P104no signal1370377072703771731
ENSG00000230223ATXN8OS4no signal1370681345707135611
ENSG00000165659DACH14no signal137201209872441330-1
ENSG00000237816RPL21P1094no signal1372278313722787871
ENSG00000232881RPS10P214no signal137248784272488316-1
ENSG000002123774no signal137302804073028105-1
ENSG00000227952RPL18AP174no signal137303427073034467-1
ENSG00000206922RNU6-80P4no signal137328015573280261-1
ENSG00000232701RPL21P1084no signal137495130074952088-1
ENSG000001775964no signal137498709474993252-1
ENSG00000136111TBC1D44no signal137585880876056250-1
ENSG000002665344no signal137578311475783173-1
ENSG000002234584no signal1376452849764552631
ENSG00000243274RN7SL571P4no signal1376709067767093601
ENSG00000224347SCEL-AS14no signal137817389078180686-1
ENSG00000136160EDNRB4no signal137846961678493903-1
ENSG000002333794no signal137851329778519009-1
ENSG00000252496RNA5SP334no signal137996366979963766-1
ENSG00000226670BCAS2P34no signal1379740254797410201
ENSG00000227676LINC010684no signal1380140881801449831
ENSG00000229011LINC010384no signal1380378553803798201
ENSG00000227862HNRNPA1P314no signal138119323381194202-1
ENSG00000231222ARF4P44no signal1381462483814630021
ENSG00000222486RNU6-77P4no signal1381839882818399721
ENSG00000207012RNU6-72P4no signal138615888386158988-1
ENSG00000226370LINC003754no signal138563922285653055-1
ENSG00000184564SLITRK64no signal138636692586373623-1
ENSG00000228241MOB1AP14no signal1386543134865436681
ENSG00000228473LIN28AP24no signal138803172788032513-1
ENSG00000165300SLITRK54no signal1388324870883318711
ENSG000002720464no signal138845988988463487-1
ENSG00000261666LINC005604no signal1389279107892826511
ENSG00000226037LINC010404no signal139012986290152763-1
ENSG00000234227RPL7L1P14no signal139048541190486195-1
ENSG000002007334no signal1390489424904894911
ENSG00000261446LINC005594no signal139071250690771973-1
ENSG00000235879FAR1P14no signal1390823120908240531
ENSG00000207858MIR6224no signal1390883436908835311
ENSG00000227983BRK1P24no signal139167598691676208-1
ENSG00000229557LINC003794no signal139177986791783661-1
ENSG00000179399GPC54no signal1392050929935194901
ENSG00000252508RNU4ATAC3P4no signal1392712097927122221
ENSG00000236240GPC5-IT14no signal1393136859931623471
ENSG00000183098GPC64no signal1393879095950596551
ENSG00000235784HNRNPA1P294no signal139404723094048108-1
ENSG000002120574no signal139511755495117644-1
ENSG00000088451TGDS4no signal139522630895248511-1
ENSG00000242037RN7SL585P4no signal139535147995351756-1
ENSG00000222129RNA5SP364no signal139530365195303783-1
ENSG00000238230LINC003914no signal139535194895355116-1
ENSG00000227640SOX21-AS14no signal1395364970953685001
ENSG00000260962LINC005574no signal1395612295956135731
ENSG00000125257ABCC44no signal139567208395953687-1
ENSG00000223298RNY3P84no signal139596308495963209-1
ENSG00000232373MTCYBP34no signal1396346823963479591
ENSG00000227714MTND6P184no signal139634623796346749-1
ENSG00000242614RN7SL164P4no signal1396821799968220991
ENSG00000234267TULP3P14no signal139759989197601181-1
ENSG00000139793MBNL24no signal1397873688980463741
ENSG00000271625PSMA6P44no signal1398127996981287131
ENSG00000232217FTLP84no signal139863920498639470-1
ENSG00000217686NUS1P44no signal139926254699263130-1
ENSG00000240767RN7SL288P4no signal134674359446743883-1
ENSG00000252854RN7SKP54no signal1346824077468243481
ENSG00000102445KIAA0226L4no signal134691613947012325-1
ENSG00000205105COX17P14no signal1347064997470653971
ENSG00000252385RNU6-68P4no signal1346984589469846921
ENSG00000136141LRCH14no signal1347127303473271751
ENSG00000139684ESD4no signal134734539147371367-1
ENSG00000224517HTR2A-AS14no signal1347426278474304341
ENSG000002285734no signal134839946548410091-1
ENSG00000136143SUCLA24no signal134851062248612125-1
ENSG00000231473LINC004414no signal134887064948877797-1
ENSG00000224510POLR2KP24no signal134870849448708670-1
ENSG00000139687RB14no signal1348877887490561221
ENSG00000136161RCBTB24no signal134906309549107369-1
ENSG00000225131PSME2P24no signal1349345264493459651
ENSG00000199788RNY3P24no signal1349669527496696281
ENSG00000235957COX7CP14no signal134976161549761806-1
ENSG00000102539MLNR4no signal1349794474497965131
ENSG00000102753KPNA34no signal135027344750367057-1
ENSG00000200064RNY4P94no signal135048277050482866-1
ENSG000002645264no signal135052667050526750-1
ENSG000002211984no signal135093728450937373-1
ENSG00000186047DLEU74no signal135128514451418075-1
ENSG00000237152DLEU7-AS14no signal1351381992514231901
ENSG00000200711RNA5SP284no signal135138712451387242-1
ENSG00000214878RPL5P314no signal135173585951736493-1
ENSG00000266072MIR56934no signal135192270351922775-1
ENSG000002699654no signal135193570151936371-1
ENSG00000243900RN7SL320P4no signal1352043886520441811
ENSG00000252141RNU6-65P4no signal1352139548521396451
ENSG00000206920RNY1P64no signal135216056052160668-1
ENSG00000242893RN7SL413P4no signal135216805752168351-1
ENSG00000136098NEK34no signal135270677552733996-1
ENSG00000232872CTAGE3P4no signal135248235452484757-1
ENSG00000272281TPTE2P24no signal135279347952908412-1
ENSG00000199605RNY4P244no signal1352974139529742341
ENSG000002444714no signal1353063128530734401
ENSG00000250299MRPS31P44no signal1353191693532115811
ENSG00000165416SUGT14no signal1353226844532750441
ENSG00000102837OLFM44no signal1353602894536261921
ENSG00000150276PPIAP264no signal1353394632533951531
ENSG00000237092LINC010654no signal135372067453725943-1
ENSG00000241613RN7SL618P4no signal1353832212538325051
ENSG00000234787LINC004584no signal135468992454707001-1
ENSG00000234278PRR20E4no signal1357741331577443521
ENSG00000234421SLC25A5P44no signal1357888873578900431
ENSG00000202422RNA5SP304no signal1358565484585655981
ENSG00000232954LINC003744no signal135878583158807251-1
ENSG00000222733RNY4P294no signal135910178959101885-1
ENSG00000223717DNAJA1P14no signal135932518159326367-1
ENSG00000232647POLR3KP14no signal135964559659645937-1
ENSG00000239003RNU7-88P4no signal1360054204600542661
ENSG00000083544TDRD34no signal1360970591611480121
ENSG000002120544no signal136102683861026919-1
ENSG000002275104no signal1361491176614941411
ENSG000002120074no signal136233441762334509-1
ENSG000002708564no signal136250122362501405-1
ENSG00000230142LINC010754no signal1362798230628240801
ENSG00000232105RPL32P284no signal1362902121629025171
ENSG00000271465SQSTM1P14no signal136298019162981049-1
ENSG00000263581MIR548X24no signal136654046266540561-1
ENSG00000184226PCDH94no signal136687696767804468-1
ENSG00000231667OR7E111P4no signal1368476487684773741
ENSG00000234765ELL2P34no signal136886381168865412-1
ENSG00000237637FRY-AS14no signal133259945132605776-1
ENSG00000139618BRCA24no signal1332889611329738051
ENSG00000215515IFIT1P14no signal1332958797329602451
ENSG00000139597N4BP2L14no signal133297486133002315-1
ENSG00000083642PDS5B4no signal1333160564333521571
ENSG00000207325RNY1P44no signal133333757633337690-1
ENSG000002216774no signal1333615489336155801
ENSG00000227604TOMM22P34no signal133352819533528539-1
ENSG00000133119RFC34no signal1334392186345406951
ENSG000001991964no signal133467484834674975-1
ENSG000002719014no signal133512006635245319-1
ENSG000002617284no signal133549997135502213-1
ENSG00000234835PHBP134no signal1335825207358259661
ENSG00000120669SOHLH24no signal133674234536871979-1
ENSG00000236036LINC004454no signal1336271661362733931
ENSG00000250709CCDC169-SOHLH24no signal133674293136871979-1
ENSG00000242715CCDC1694no signal133680118236871977-1
ENSG00000120664SPG20OS4no signal1336920568369437381
ENSG00000223383HIST1H2APS64no signal133706421537064578-1
ENSG00000235306GAPDHP344no signal1337314178373150001
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