Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H28 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.8
Chromosome Average Copy Number: 3

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
11198510958591313no signal
1195859376960449322no signal
11960520811250745023no signal
111250752881250837051loss
111250882701251918433no signal
111251922811349447703no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000200197RNU1-21P3no signal111236346351236347971
ENSG00000181518OR8D43no signal111237771091237781831
ENSG00000254737OR10G43no signal111238862821238872171
ENSG00000234560OR10G83no signal111239002971239013411
ENSG00000182634OR10G73no signal11123908773123909717-1
ENSG00000110002VWA5A3no signal111239860691240184281
ENSG00000239426OR8F1P3no signal111240778901240788221
ENSG00000255425OR8G3P3no signal111240853461240863941
ENSG000001812143no signal111240954371240963651
ENSG00000255030OR8B5P3no signal11124227456124228365-1
ENSG00000255341OR8Q1P3no signal111244714801244721341
ENSG00000154144TBRG13no signal111244927321245052871
ENSG00000154146NRGN3no signal111246097421246171061
ENSG000002545093no signal111246611241246615561
ENSG000002549413no signal11124677718124678165-1
ENSG000002159423no signal11124712964124713043-1
ENSG00000154134ROBO33no signal111247352821247513661
ENSG00000187686KRT18P593no signal111249830571249966771
ENSG000002592903no signal111250580111250613001
ENSG000002612573no signal11125970400125972308-1
ENSG000002547713no signal11126049392126049593-1
ENSG00000182934SRPR3no signal11126132814126139039-1
ENSG000002550623no signal11126164193126174213-1
ENSG000002546073no signal111265227471265519991
ENSG000002553173no signal111268623481268653541
ENSG000002450083no signal11128499548128556817-1
ENSG00000043039BARX23no signal111292458351293221711
ENSG00000240121RPS27P203no signal111294077641294080091
ENSG000002551883no signal11129657959129658085-1
ENSG00000255352PPP1R10P13no signal11130659126130660920-1
ENSG00000264919MIR46973no signal11133768399133768476-1
ENSG000002546163no signal111340429901340435751
ENSG00000151502VPS26B3no signal111340945391341176861
ENSG000002355053no signal11104772276104789800-1
ENSG000002544333no signal11105956717105972702-1
ENSG00000225215SMARCE1P13no signal11107274130107275315-1
ENSG00000149311ATM3no signal111080932111082398291
ENSG00000178202KDELC23no signal11108342832108369159-1
ENSG00000255379CYCSP293no signal11108693060108693377-1
ENSG000002649973no signal11109134221109134291-1
ENSG000002704233no signal11109855969109856386-1
ENSG000002552103no signal111099202531099208851
ENSG00000239354RPS17P153no signal11110976271110976619-1
ENSG00000264032MIR44913no signal111112184821112185491
ENSG00000183644C11orf883no signal111113855101114077561
ENSG00000223324RN7SKP2733no signal111115538351115541481
ENSG000002549903no signal11111639392111649074-1
ENSG000002585293no signal11111657010111750149-1
ENSG00000150768DLAT3no signal111118955381119351141
ENSG00000150773PIH1D23no signal11111934734111944998-1
ENSG000002552923no signal111119576271120645281
ENSG000002727903no signal111120412531120713941
ENSG00000243930RPS12P213no signal111120890491120894431
ENSG000002546263no signal111126580271126665771
ENSG00000149292TTC123no signal111131852511132542661
ENSG000002560913no signal111135824421135831201
ENSG000002566033no signal11113641115113642413-1
ENSG000002564523no signal111136887991136931801
ENSG00000109906ZBTB163no signal111139303151141213981
ENSG000002211123no signal11113957533113957651-1
ENSG00000076053RBM73no signal111142707521142849251
ENSG000002563153no signal111152674741152683761
ENSG000002602543no signal111155092811155176801
ENSG00000246100LINC009003no signal11115624966115631345-1
ENSG000002396003no signal11115821823115822209-1
ENSG00000110244APOA43no signal11116691419116694022-1
ENSG00000118137APOA13no signal11116706467116708666-1
ENSG000002643443no signal11116886146116886245-1
ENSG000002704033no signal111175391981175395731
ENSG00000137731FXYD23no signal11117671559117699413-1
ENSG00000255163HSPE1P183no signal11118079647118079926-1
ENSG00000149573MPZL23no signal11118124118118135251-1
ENSG00000167286CD3D3no signal11118209669118213459-1
ENSG00000160654CD3G3no signal111182150591182258761
ENSG00000118094TREH3no signal11118528026118550399-1
ENSG00000207462RNU6-376P3no signal111185730511185731561
ENSG000002554223no signal111185753161186209731
ENSG00000254621SETP163no signal11118704555118705265-1
ENSG00000160683CXCR53no signal111187544751187685081
ENSG00000264211MIR44923no signal111187814171187814961
ENSG00000240970RPL23AP643no signal11118873722118874156-1
ENSG000002721863no signal11118938085118938409-1
ENSG00000188486H2AFX3no signal11118964564118966177-1
ENSG00000222249RNU6-262P3no signal11119160272119160387-1
ENSG00000076706MCAM3no signal11119179241119192231-1
ENSG00000235718MFRP3no signal11119209652119217383-1
ENSG000002547403no signal111192434161192523231
ENSG00000181264TMEM1363no signal111201958381202043911
ENSG000002595413no signal11120120468120136641-1
ENSG00000149403GRIK43no signal111203824681208596131
ENSG00000253035RNU4ATAC5P3no signal111223221821223223071
ENSG00000254572GLULP33no signal11122484152122485194-1
ENSG000002390793no signal11122596916122597019-1
ENSG00000109944C11orf633no signal111227533911228305061
ENSG00000109971HSPA83no signal11122928197122933938-1
ENSG000002546673no signal111233010581233064271
ENSG00000255414LINC010593no signal111233251061233311181
ENSG000002554403no signal1174120105741274241
ENSG00000223202RN7SKP2973no signal1174396269743965501
ENSG00000054938CHRDL23no signal117440747474442430-1
ENSG000002276153no signal117445676174457159-1
ENSG00000255460ZDHHC20P33no signal117493936774939702-1
ENSG00000207445SNORD15B3no signal1175115465751156101
ENSG000002549753no signal1176386123764142391
ENSG00000149269PAK13no signal117703275277185680-1
ENSG000002195293no signal117752436577524722-1
ENSG000002544593no signal117754070077583308-1
ENSG000002546753no signal1177733979777347671
ENSG00000033327GAB23no signal117792634378129394-1
ENSG000002544203no signal1178035804781550951
ENSG00000266570MIR55793no signal117913321379133270-1
ENSG000002544713no signal1179698556797006731
ENSG00000182103FAM181B3no signal118244305382444906-1
ENSG000002553823no signal1182502704825281881
ENSG00000165490C11orf823no signal1182611017826693191
ENSG000002546983no signal118267472382750157-1
ENSG000002545223no signal118275184882752445-1
ENSG000002699393no signal118289656382898078-1
ENSG000002555413no signal1182920441829206761
ENSG000002552343no signal1182997171831345591
ENSG00000200877RNU6-560P3no signal1185864269858643761
ENSG00000254727PTP4A1P63no signal1186143140861436171
ENSG00000149201CCDC813no signal1186085778861341511
ENSG00000254748HNRNPCP83no signal1186735625867368191
ENSG00000199235RNU6-1063P3no signal118735938187359441-1
ENSG000002551833no signal118742924687430303-1
ENSG00000207113RNU6-16P3no signal118834597388346079-1
ENSG00000086991NOX43no signal118905752489322779-1
ENSG000002554863no signal118945665089460421-1
ENSG000002555403no signal1189464185894679501
ENSG000002551703no signal1189498052894983061
ENSG000002546173no signal1189620534896231591
ENSG000002548033no signal1189783113897834341
ENSG00000223709TRIM64EP3no signal118978914589796167-1
ENSG00000255009UBTFL13no signal1189819081898202991
ENSG000002143913no signal1190015728900173401
ENSG000002231013no signal1190057944900580521
ENSG00000244244RPS3AP423no signal119223131892232101-1
ENSG000002551273no signal1192647768926497571
ENSG00000134640MTNR1B3no signal1192702886927182321
ENSG000002554453no signal1192885241928859161
ENSG000002341063no signal1193268634932689821
ENSG00000207112SNORA253no signal119346367993463812-1
ENSG00000206834SNORA13no signal119346517093465299-1
ENSG00000182919C11orf543no signal1193474757934979151
ENSG00000181333HEPHL13no signal1193754527938469171
ENSG00000166025AMOTL13no signal1194439597946099181
ENSG000002567793no signal1194770646947716201
ENSG000002503903no signal1195215570952307171
ENSG00000266192MIR1260B3no signal1196074602960746901
ENSG00000200411RNA5SP3463no signal119620773696207856-1
ENSG000002666163no signal119929566999295736-1
ENSG00000187151ANGPTL53no signal11101761405101787253-1
ENSG000002526793no signal111019276941019277481
ENSG000002391543no signal11101929036101929139-1
ENSG00000212466RNU6-952P3no signal111021844531021845601
ENSG00000023445BIRC33no signal111021882151022101341
ENSG000002554823no signal111023379861023695321
ENSG00000137674MMP203no signal11102447566102496063-1
ENSG000002398613no signal111029159661029164411
ENSG000002609663no signal11102921416102926528-1
ENSG00000162194C11orf483no signal116243028762439727-1
ENSG00000177363LRRN4CL3no signal116245387462457371-1
ENSG00000133316WDR743no signal116259981462609281-1
ENSG00000149452SLC22A83no signal116275662662783311-1
ENSG00000168539CHRM13no signal116267615162689279-1
ENSG00000176485PLA2G163no signal116334066763384355-1
ENSG00000173511VEGFB3no signal1164002010640062591
ENSG00000173457PPP1R14B3no signal116401195664014413-1
ENSG000002570693no signal1164059194640722411
ENSG000002692903no signal116455239364553092-1
ENSG00000168070C11orf853no signal116470498964739557-1
ENSG00000222477RNU2-23P3no signal1164915055649152491
ENSG00000204710SPDYC3no signal1164937625649407151
ENSG00000014138POLA23no signal1165029233650730601
ENSG000002554783no signal1165134909651427701
ENSG00000251562MALAT13no signal1165265233652739401
ENSG00000260233SSSCA1-AS13no signal116533713165337744-1
ENSG00000254470AP5B13no signal116554336465548273-1
ENSG00000175315CST63no signal1165779312657809761
ENSG000002387523no signal1165820615658206991
ENSG000002451563no signal116603730366045996-1
ENSG000002554683no signal1166115421661322751
ENSG00000174576NPAS43no signal1166188475661941781
ENSG00000174547MRPL113no signal116620254666234209-1
ENSG000002545963no signal1166221705662220521
ENSG00000248746ACTN33no signal1166313866663308001
ENSG00000248643RBM14-RBM43no signal1166384097664139401
ENSG00000173898SPTBN23no signal116645271966496697-1
ENSG00000266423MIR31633no signal116670190566701977-1
ENSG00000173120KDM2A3no signal1166886740670255581
ENSG00000175482POLD43no signal116711824867124443-1
ENSG00000175634RPS6KB23no signal1167195931672028721
ENSG00000110711AIP3no signal1167250512672585741
ENSG00000167791CABP23no signal116728638367290899-1
ENSG00000254447OR7E11P3no signal116750307967504030-1
ENSG00000243672RPS3AP403no signal116769312267693902-1
ENSG000002546103no signal116770203467707245-1
ENSG000002550313no signal1167818207678212291
ENSG00000162337LRP53no signal1168080077682167431
ENSG00000254856NDUFA3P23no signal116825607768256308-1
ENSG000002505083no signal1168638132686420101
ENSG00000132740IGHMBP23no signal1168671310687080701
ENSG00000172935MRGPRF3no signal116877186368780877-1
ENSG000002556063no signal116925313369259511-1
ENSG000002547213no signal117005239770053496-1
ENSG00000263744MIR36643no signal117071837570718473-1
ENSG00000172890NADSYN13no signal1171164155712351531
ENSG00000184276DEFB108B3no signal1171544246715487561
ENSG00000228915OR7E128P3no signal1171604456716054791
ENSG00000149357LAMTOR13no signal117179694171814433-1
ENSG00000257075RPEP63no signal1171842328718429531
ENSG000002565183no signal1171869866718709051
ENSG00000110195FOLR13no signal1171900602719073451
ENSG000002282863no signal117196090071962332-1
ENSG000002558083no signal1172354281723704511
ENSG00000186635ARAP13no signal117239611472504644-1
ENSG00000256007ARAP1-AS13no signal1172396120724048531
ENSG000002570383no signal117301828073020406-1
ENSG00000110237ARHGEF173no signal1173019334730801361
ENSG00000054967RELT3no signal1173087309731085191
ENSG000002557863no signal1173163065731633891
ENSG000002560343no signal1173471608734721151
ENSG000002558473no signal117367470273681332-1
ENSG000002567233no signal117370601773707196-1
ENSG00000199077MIR129-23no signal1143602944436030331
ENSG000002546543no signal1144995453449995791
ENSG000002546643no signal114523736645256843-1
ENSG000002443133no signal114645016346450700-1
ENSG00000180423HARBI13no signal114662441146639459-1
ENSG00000212135SNORD673no signal114678393946784049-1
ENSG00000025434NR1H33no signal1147269851472903961
ENSG00000110514MADD3no signal1147290712473515821
ENSG000002659103no signal114740763347407733-1
ENSG00000165915SLC39A133no signal1147428683474380471
ENSG00000165916PSMC33no signal114744032047447993-1
ENSG00000252327RNU6-1302P3no signal114746155747461617-1
ENSG00000196666FAM180B3no signal1147608198476107461
ENSG00000109920FNBP43no signal114773807247788995-1
ENSG00000149177PTPRJ3no signal1148002113481896701
ENSG00000255297OR4A41P3no signal1148611312486122391
ENSG00000254674OR4A42P3no signal1148631615486325521
ENSG00000229361UBTFL73no signal1149103459491046491
ENSG000002553383no signal1149132308491327721
ENSG000002555323no signal1149327266494012211
ENSG000002262683no signal114945502549455990-1
ENSG000002551993no signal115006006350062069-1
ENSG000002550423no signal115024683250254505-1
ENSG000002555433no signal1155034884550351121
ENSG000002552833no signal115504692355052999-1
ENSG00000254886OR4A10P3no signal1155199433551998431
ENSG00000254576OR4C1P3no signal1155277217552781471
ENSG00000181939OR4C153no signal1155321783553228951
ENSG00000214880OR7E5P3no signal115574617955753881-1
ENSG00000242208RPL5P293no signal1156124804561256971
ENSG00000255466OR5AL2P3no signal1156161205561621241
ENSG00000150269OR5M93no signal115622994556230877-1
ENSG00000181371OR5M83no signal115625782556258871-1
ENSG00000254825OR9G2P3no signal115651849956519378-1
ENSG00000255083OR5AK1P3no signal1156785575567863611
ENSG00000149131SERPING13no signal1157364860573823261
ENSG00000172409CLP13no signal1157416465574293401
ENSG00000156599ZDHHC53no signal1157435219574686591
ENSG00000156603MED193no signal115747118657479693-1
ENSG00000254462TMX2-CTNND13no signal1157480077575590581
ENSG00000254749OR5BD1P3no signal115771307057713886-1
ENSG00000236541VN2R9P3no signal115780818057809132-1
ENSG000002548533no signal115783985057842910-1
ENSG00000272685OR9I3P3no signal115787619257877133-1
ENSG00000172377OR9I13no signal115788597257886916-1
ENSG00000255218OR5BC1P3no signal115808510958085847-1
ENSG00000197786OR5B173no signal115812559758126542-1
ENSG00000172769OR5B33no signal115816993758170882-1
ENSG00000172362OR5B123no signal115820659358207646-1
ENSG000002552993no signal115826536158273231-1
ENSG00000186660ZFP913no signal1158346584583885151
ENSG00000255386OR5BR1P3no signal115910023059101559-1
ENSG00000166884OR4D63no signal1159224411592254641
ENSG00000252893RNU7-58P3no signal1159326273593263341
ENSG00000172289OR10V13no signal115948029659481337-1
ENSG00000149534MS4A23no signal1159855734598634441
ENSG000002561963no signal116068594160692869-1
ENSG00000229183PGA43no signal1160989688610189291
ENSG00000187049TMEM2163no signal1161159159611663351
ENSG00000167985SDHAF23no signal1161197514612150011
ENSG000002502303no signal1161355966613750221
ENSG00000149485FADS13no signal116156709961596790-1
ENSG000002690893no signal1161735453617367551
ENSG00000149021SCGB1A13no signal1162172575621906671
ENSG00000148926ADM3no signal1110326227103289441
ENSG00000110321EIF4G23no signal111081859710830657-1
ENSG000002463083no signal1110830844108444781
ENSG00000255123MTND5P213no signal1111261306112618271
ENSG000002552603no signal111126473511265262-1
ENSG000002553513no signal1111373973113748541
ENSG000002554623no signal1111591631115953291
ENSG000002554923no signal111187803711878406-1
ENSG000002523293no signal111292636412926535-1
ENSG000002032583no signal111294273312944472-1
ENSG00000254791FAR1-IT13no signal1113690874136916961
ENSG00000240454RPL39P263no signal111370704613707203-1
ENSG000002549303no signal111386640913892163-1
ENSG00000133818RRAS23no signal111429947214386052-1
ENSG00000251991RNU7-49P3no signal1114500438145004991
ENSG00000186104CYP2R13no signal111489955314913798-1
ENSG00000175868CALCB3no signal1114926543151038881
ENSG000002546953no signal1115665431157269141
ENSG000002546613no signal1115932503159489891
ENSG00000110693SOX63no signal111598799516761138-1
ENSG000002548783no signal1116044736160530611
ENSG00000110696C11orf583no signal1116634679167784281
ENSG00000166689PLEKHA73no signal111679984217035990-1
ENSG000002213223no signal1117095499170955821
ENSG00000187486KCNJ113no signal111740740617410878-1
ENSG00000006071ABCC83no signal111741443217498449-1
ENSG00000188162OTOG3no signal1117568920176686971
ENSG000002553353no signal111771681417718487-1
ENSG000002554483no signal111802208918044478-1
ENSG00000110756HPS53no signal111830022318343745-1
ENSG000002570433no signal1118686597186870951
ENSG000002554243no signal111905124419051985-1
ENSG00000177054ZDHHC133no signal1119138646191979691
ENSG00000254544PCNAP43no signal111929608719296816-1
ENSG00000166833NAV23no signal1119372271201431441
ENSG000002074073no signal111961270319612838-1
ENSG000002706073no signal111973248019734165-1
ENSG000002293873no signal1122646860226473691
ENSG00000109854HTATIP23no signal1120385231204053291
ENSG000002554183no signal1123186446232247071
ENSG000002553683no signal112516207925162569-1
ENSG000002554543no signal1125652266256525871
ENSG000002544563no signal1125756317258033051
ENSG000002552433no signal1126210670262298941
ENSG000002548623no signal1127493276275039801
ENSG00000121621KIF18A3no signal112804216728129855-1
ENSG000002381493no signal112830878228309172-1
ENSG00000272882OR2BH1P3no signal1129008182290090451
ENSG000002545263no signal1129181503292882811
ENSG00000240554RPL7AP583no signal1129747311297481121
ENSG00000066382MPPED23no signal113040604030608419-1
ENSG00000270903HNRNPA3P93no signal113261333932614317-1
ENSG000002552023no signal113368676633718247-1
ENSG00000205177C11orf913no signal113371980733722347-1
ENSG00000110429FBXO33no signal113376248533796089-1
ENSG000002552713no signal113455456134579471-1
ENSG000002554433no signal113523189035236532-1
ENSG000002546723no signal113598856035990226-1
ENSG000002552563no signal1135993978360105571
ENSG000002545663no signal113634270836344990-1
ENSG00000242834RPL7AP563no signal1137747216377480061
ENSG000002551753no signal113863981438667906-1
ENSG000002213573no signal1140781072407811551
ENSG000002551093no signal114220484242275262-1
ENSG000002545593no signal112036232054701
ENSG00000206013IFITM53no signal11298200299526-1
ENSG000002700303no signal11325703326294-1
ENSG00000185101ANO93no signal11417933442011-1
ENSG00000023191RNH13no signal11494512507300-1
ENSG00000199038MIR2103no signal11568089568198-1
ENSG00000185507IRF73no signal11612553615999-1
ENSG00000177042TMEM803no signal116954287050281
ENSG00000198788MUC23no signal11107487511044191
ENSG00000117983MUC5B3no signal11124429612834061
ENSG000002679503no signal11129580912960331
ENSG00000205869KRTAP5-13no signal1116055721606513-1
ENSG00000205865FAM99B3no signal1117044991706859-1
ENSG000002490863no signal11188540718878971
ENSG00000167244IGF23no signal1121503422170833-1
ENSG00000254647INS3no signal1121810092182571-1
ENSG00000180176TH3no signal1121851592193107-1
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