Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H2342 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.66
Chromosome Average Copy Number: 4.28

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
6985887981018791385no signal
61018795651046029733no signal
61046032931047413104no signal
61047438571063887604no signal
61063891561071771086no signal
61071775001095040866no signal
61095054451100987666no signal
61101026011144780986no signal
61144797091218241464no signal
61218242231230345054no signal
61230410621710510064no signal
6149662296074765no signal
629610989307258414no signal
630726748501105065no signal
650110828679555754no signal
667955735683723117no signal
668375896721791673no signal
672180684722139004no signal
672215432792570124no signal
679257912941055293no signal
694106131947000894no signal
694700954985808614no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000111962UST4no signal61490684641493981261
ENSG000002251354no signal61477088001477116011
ENSG00000131013PPIL44no signal6149825869149867174-1
ENSG000002284084no signal61495390621495652081
ENSG00000055211GINM14no signal61498874301499128841
ENSG00000009765IYD4no signal61506900281507271051
ENSG000002685924no signal61501837331502406431
ENSG000002207454no signal6153280494153280740-1
ENSG00000131018SYNE14no signal6152442819152958936-1
ENSG000002207334no signal61539893121539894971
ENSG00000078269SYNJ24no signal61584028881585202081
ENSG000002130784no signal6157787022157787955-1
ENSG00000272047GTF2H54no signal61585893841586203761
ENSG00000219188CACYBPP34no signal6158936637158937261-1
ENSG000002658034no signal61585960161585961021
ENSG00000243775OSTCP14no signal6159262149159278664-1
ENSG00000233893EZR-AS14no signal61592390431592416251
ENSG00000203711C6orf994no signal61592909711593313851
ENSG00000112096SOD24no signal6160090089160183561-1
ENSG000002130764no signal6159342303159343182-1
ENSG000002209134no signal61613268021613346701
ENSG00000146477SLC22A34no signal61607693001608760141
ENSG000001971464no signal6167357853167360151-1
ENSG00000256391SDIM14no signal6166307330166309725-1
ENSG000002286484no signal61676553791676594041
ENSG00000071994PDCD24no signal6170884383170893780-1
ENSG000002610394no signal6169575401169582835-1
ENSG00000203801LINC002226no signal61090728571090911451
ENSG00000135537LACE16no signal61086160981088479991
ENSG000002288346no signal6109228818109229076-1
ENSG000002188726no signal6109177603109177940-1
ENSG000002195596no signal6110883378110883818-1
ENSG000002716076no signal61111850631111856541
ENSG000002170416no signal61110217651110221031
ENSG00000207431RNU6-906P6no signal6111329473111329579-1
ENSG00000216904SOCS5P56no signal61135433681135452741
ENSG00000112761WISP36no signal61123752751123921711
ENSG000002182086no signal61139027031139031491
ENSG000002323166no signal6113749742113754623-1
ENSG000001759676no signal61142253021142428061
ENSG00000173626TRAPPC3L4no signal6116816152116866773-1
ENSG00000178425NT5DC14no signal61164220121165706601
ENSG00000217089RPS29P134no signal6117369833117370001-1
ENSG00000173612GPRC6A4no signal6117113248117150200-1
ENSG00000047932GOPC4no signal6117639374117923691-1
ENSG000002531944no signal61192559501193527061
ENSG00000207461RNU6-253P4no signal6117778897117779001-1
ENSG000002197844no signal6121799419121801054-1
ENSG00000207982MIR548B4no signal6119390212119390308-1
ENSG000002203264no signal6121962155121962367-1
ENSG00000201379RNU4-76P4no signal6121863632121863772-1
ENSG00000111906HDDC24no signal6125541108125623282-1
ENSG000002602124no signal61279805691279814831
ENSG00000220548VIMP14no signal6126923502126924795-1
ENSG00000152894PTPRK4no signal6128289924128841870-1
ENSG000002196994no signal6127980835127981724-1
ENSG000002022004no signal6129082862129082953-1
ENSG00000219776RPL21P674no signal61317901991317906761
ENSG00000146376ARHGAP184no signal6129897277130031370-1
ENSG00000252560RNU4-18P4no signal6131963958131964106-1
ENSG00000112282MED234no signal6131895106131949369-1
ENSG00000200895RN7SKP2454no signal61321414741321417931
ENSG000002195324no signal6132140943132141231-1
ENSG00000118523CTGF4no signal6132269316132272513-1
ENSG00000265669MIR548AJ14no signal6132436332132436403-1
ENSG000002361664no signal61324062241324204191
ENSG00000179073TAAR34no signal6132929364132930441-1
ENSG00000223912EEF1A1P364no signal61325931211325944711
ENSG00000112299VNN14no signal6133002729133035188-1
ENSG000002386314no signal6134527549134527652-1
ENSG000002235424no signal6133756215133760602-1
ENSG00000218772FAM8A6P4no signal6134924702134925836-1
ENSG000002363784no signal6136128286136129604-1
ENSG00000112339HBS1L4no signal6135281516135424194-1
ENSG000002342634no signal61369503101369691371
ENSG00000213111COX5BP24no signal6136355169136356293-1
ENSG000002353994no signal61373163071373206411
ENSG000002341474no signal6141167095141174061-1
ENSG000002213364no signal6140981760140981850-1
ENSG00000010818HIVEP24no signal6143072604143266338-1
ENSG000002709834no signal61423838541423841901
ENSG000002326184no signal61432713481432777831
ENSG000002244604no signal6143267184143277835-1
ENSG00000189007ADAT24no signal6143743969143771810-1
ENSG000002194094no signal61447190951447198881
ENSG00000152818UTRN4no signal61446068371451741701
ENSG000002176124no signal6145810766145813228-1
ENSG000002207394no signal6145029242145029633-1
ENSG00000112425EPM2A4no signal6145822719146057160-1
ENSG000002723974no signal6147269664147272295-1
ENSG000002708284no signal6146058047146058309-1
ENSG000002235043no signal668765243687703941
ENSG000002563524no signal665720260657203361
ENSG00000082269FAM135A3no signal671122644712708771
ENSG000002243493no signal67112253171123653-1
ENSG000002628033no signal671403542714043221
ENSG00000112309B3GAT23no signal67156638271666741-1
ENSG000002177673no signal671444206714446651
ENSG000002187324no signal67302630273027139-1
ENSG000002237653no signal672160537721685771
ENSG00000266180MIR42824no signal67367741073677476-1
ENSG00000234882EIF3EP14no signal674001685740030001
ENSG000002298524no signal673972938740111241
ENSG00000203908KHDC3L4no signal674072400740738941
ENSG000002719864no signal67419731574197600-1
ENSG00000231332OOEP-AS14no signal674079427740974401
ENSG000002381564no signal676164660761686161
ENSG000002316524no signal67440362674405854-1
ENSG00000112706IMPG14no signal67663083276782395-1
ENSG00000146243IRAK1BP13no signal679577189796561571
ENSG00000135312HTR1B4no signal67817194878173490-1
ENSG000002315333no signal680130014801310221
ENSG000002620483no signal68011595780116491-1
ENSG00000135338LCA53no signal68019470880247175-1
ENSG00000218748DBIP13no signal68014662580146884-1
ENSG000002353573no signal68051330080516942-1
ENSG000002308523no signal684732774847342721
ENSG000002249953no signal68252300382523874-1
ENSG000002341553no signal68609693786099904-1
ENSG000002317763no signal68513074685265870-1
ENSG00000214460TPT1P63no signal68613717186137684-1
ENSG00000220563PKMP33no signal68636961086370324-1
ENSG000002360163no signal686340080863409951
ENSG00000198738SMIM11P13no signal68644546286445639-1
ENSG000002173343no signal686441089864417291
ENSG000002183133no signal68788308687884021-1
ENSG00000222686RNU4-72P3no signal686461299864614711
ENSG00000203872C6orf1633no signal688054567880751811
ENSG000002071313no signal68853589188536003-1
ENSG00000213204C6orf1653no signal688117730882213521
ENSG00000118432CNR13no signal68884958388876078-1
ENSG000002119833no signal68855726388557350-1
ENSG00000218965NACAP73no signal69013181890132767-1
ENSG00000112182BACH23no signal69063624891006627-1
ENSG00000239316RN7SL11P3no signal690187860901881501
ENSG000002203403no signal69243700092437223-1
ENSG000002704844no signal69515174895153527-1
ENSG00000213187COPS5P13no signal69380169493802478-1
ENSG00000112214FHL54no signal697010424970645121
ENSG00000014123UFL14no signal696969471970031521
ENSG000002173314no signal69712000597120845-1
ENSG000002424864no signal698155635981805881
ENSG00000146263MMS22L4no signal69759003797731093-1
ENSG00000112234FBXL45no signal69931642099395849-1
ENSG000002206955no signal61009781521009789281
ENSG000001993035no signal6100090113100090223-1
ENSG000002720175no signal61000159731000169721
ENSG00000164418GRIK25no signal61018466641025179581
ENSG000002529184no signal6105644728105644811-1
ENSG000002022833no signal61040310101040311431
ENSG000002074996no signal61068685811068686821
ENSG000002721024no signal6105721095105721635-1
ENSG000002003146no signal61069027031069028041
ENSG00000112333NR2E16no signal61084872621085100131
ENSG000002032816no signal6107584371107584617-1
ENSG00000204228HSD17B85no signal633172419331746081
ENSG00000231389HLA-DPA15no signal63303234633048552-1
ENSG00000204227RING15no signal633176272331804991
ENSG000002694905no signal63366319633663474-1
ENSG00000228285LYPLA2P15no signal63333332533334020-1
ENSG00000124493GRM45no signal63398962834123399-1
ENSG00000221697MIR12755no signal63396774933967828-1
ENSG000002217795no signal63403693434036995-1
ENSG00000270800RPS10-NUDT35no signal63425654734393825-1
ENSG00000272325NUDT35no signal63424745634360451-1
ENSG000002216355no signal63443856734438706-1
ENSG00000137392CLPS5no signal63576275935765088-1
ENSG00000146197SCUBE35no signal635182190352208561
ENSG000002642415no signal635101231351013151
ENSG000002469825no signal63611447536164982-1
ENSG00000213500LAP3P25no signal636641594366430471
ENSG00000112081SRSF35no signal636562145365733771
ENSG00000112130RNF85no signal637321748373625141
ENSG000002383755no signal63721898037219082-1
ENSG00000112139MDGA15no signal63760028437667082-1
ENSG00000204092LINC009515no signal64031208340313890-1
ENSG00000204091TDRG15no signal640302693403476241
ENSG00000188056TREML45no signal641196062412066201
ENSG000002360755no signal64046937040470132-1
ENSG00000212176RNA5SP2075no signal64120725841207364-1
ENSG00000266494MIR46415no signal641566461415665261
ENSG00000096264NCR25no signal641303393413186251
ENSG000002687455no signal641759148417592151
ENSG00000124593PRICKLE45no signal641748087417578791
ENSG00000221821C6orf2265no signal64285800542858554-1
ENSG00000124659TBCC5no signal64271221942714558-1
ENSG000002311135no signal642908102429160981
ENSG00000137171KLC45no signal643008515430428371
ENSG00000044090CUL75no signal64300535543021683-1
ENSG00000112667DNPH15no signal64319336743197222-1
ENSG00000204052LRRC735no signal64347470743478424-1
ENSG00000171462DLK25no signal64341809043424370-1
ENSG00000265700MIR46475no signal64422194344222022-1
ENSG00000137216TMEM63B5no signal644094651441232561
ENSG000002718575no signal64538881645389742-1
ENSG000002364665no signal646459789465004951
ENSG000002265415no signal646406047464063561
ENSG00000112818MEP1A5no signal646761127468075151
ENSG00000230062ANKRD665no signal646714654467272431
ENSG000002713285no signal647336679473369661
ENSG000002169134no signal65086532850865938-1
ENSG000002183375no signal64904534949045688-1
ENSG00000225613MIR133BHG4no signal65201161252015917-1
ENSG00000170927PKHD14no signal65148009851952423-1
ENSG00000112116IL17F4no signal65210147952109335-1
ENSG00000112115IL17A4no signal652051185520554361
ENSG00000253026RNU6-464P4no signal65301859353018696-1
ENSG00000219863RPL31P284no signal653219486532198631
ENSG000002187134no signal65307139653073495-1
ENSG000002493794no signal653367983533717171
ENSG00000271373NANOGP34no signal65328325053283535-1
ENSG00000236996MLIP-IT14no signal653863688538719501
ENSG000002702134no signal65802820158028363-1
ENSG00000216854RPL17P264no signal656735989567365411
ENSG000002200304no signal66199640361996816-1
ENSG000002725414no signal65818216958182746-1
ENSG000002666804no signal66428091064282313-1
ENSG00000217811HNRNPDP24no signal66534109865341575-1
ENSG00000219653GCNT1P44no signal664567334645676621
ENSG00000256018HIST1H3G5no signal62627114626271612-1
ENSG00000124578HIST1H4G5no signal62624688626247259-1
ENSG00000220875HIST1H3PS15no signal62632210426322520-1
ENSG000002159795no signal62636570426365780-1
ENSG00000186470BTN3A25no signal626365387263785461
ENSG00000181315ZNF3225no signal62663651826659980-1
ENSG00000219770VN1R11P5no signal627051059270519261
ENSG000002615845no signal626686469266881921
ENSG00000197914HIST1H4K5no signal62779895227799305-1
ENSG000002724685no signal62709043627091000-1
ENSG00000198704GPX65no signal62847107328495992-1
ENSG00000198374HIST1H2AL5no signal627833034278336061
ENSG000002211915no signal628743693287438001
ENSG000002714405no signal62860115828601371-1
ENSG00000224157HCG145no signal628864307288650991
ENSG00000204702OR2J15no signal629068386290696581
ENSG00000204704OR2W15no signal62901199029013017-1
ENSG00000204687MAS1L5no signal62945447429455738-1
ENSG00000204701OR2J35no signal629079668290806031
ENSG00000213900RPS17P15no signal62945704829457453-1
ENSG00000213886UBD5no signal62952329229527702-1
ENSG00000229281GPR53P5no signal62950548129506564-1
ENSG00000201330SNORD32B5no signal629550026295501091
ENSG00000232173OR2H5P5no signal629541686295426131
ENSG00000204642HLA-F4no signal629690552297063051
ENSG00000204644ZFP574no signal62964016929648887-1
ENSG00000225864HCG4P114no signal62969075829691748-1
ENSG00000230521HCG4P74no signal62985507129856045-1
ENSG00000235821IFITM4P4no signal62971850629718925-1
ENSG00000231130HLA-T4no signal629864431298655631
ENSG00000228078HLA-U4no signal629901878299020631
ENSG00000233677DDX39BP14no signal629874320298746861
ENSG00000204622HLA-J4no signal629974360299777331
ENSG00000224372HLA-N4no signal630319193303193271
ENSG000002529014no signal63005659830056730-1
ENSG00000137337MDC14no signal63066758430685666-1
ENSG000002357814no signal630484043304869941
ENSG00000263608RN7SL353P4no signal630718815307190621
ENSG000002722734no signal630710706307113691
ENSG00000214894LINC002435no signal63076643130798436-1
ENSG00000204525HLA-C5no signal63123652631239907-1
ENSG00000237775DDR1-AS15no signal63083475930843695-1
ENSG000002568515no signal631483756314839881
ENSG00000204516MICB5no signal631462658314789011
ENSG00000200816SNORA385no signal631590856315909871
ENSG00000204475NCR35no signal63155667231560762-1
ENSG00000204463BAG65no signal63160680531620482-1
ENSG00000204420C6orf255no signal631686371316944911
ENSG00000204427ABHD16A5no signal63165472631671221-1
ENSG00000204366ZBTB125no signal63186738431869769-1
ENSG00000228727SAPCD15no signal631730576317326281
ENSG00000243649CFB5no signal631895475319198611
ENSG00000258388PPT2-EGFL85no signal632121622321397551
ENSG00000224389C4B5no signal631982539320031951
ENSG00000237285HNRNPA1P25no signal632292996322939551
ENSG00000204296C6orf105no signal63225630332339684-1
ENSG00000196735HLA-DQA15no signal632595956326148391
ENSG00000251916RNU1-61P5no signal63251771732517867-1
ENSG00000237541HLA-DQA25no signal632709119327149921
ENSG00000242574HLA-DMB5no signal63290240632908847-1
ENSG00000235301HLA-Z5no signal632864193328642671
ENSG000002637565no signal63293984232940630-1
ENSG00000204257HLA-DMA5no signal63291639032936871-1
ENSG00000204252HLA-DOA5no signal63297195532977389-1
ENSG00000112685EXOC25no signal6485133693117-1
ENSG000002717275no signal67115337507291
ENSG00000188996HUS1B5no signal6655939656963-1
ENSG000002304385no signal628548962881641-1
ENSG000002719115no signal67616757806481
ENSG000002248465no signal629899602999368-1
ENSG000002704775no signal636941573694309-1
ENSG00000137266SLC22A235no signal632691963457256-1
ENSG000002606045no signal639051443912213-1
ENSG000002381585no signal6383216738559711
ENSG000002548215no signal6413565741462871
ENSG00000214113LYRM45no signal651028275261172-1
ENSG00000219607PPP1R3G5no signal6508572050874551
ENSG00000239472RN7SL221P5no signal659187935919077-1
ENSG00000265083MIR36915no signal651484675148556-1
ENSG000002262815no signal666929776711235-1
ENSG000002014835no signal671878157187919-1
ENSG000002233425no signal669012556918948-1
ENSG000002305705no signal673410877342289-1
ENSG00000124783SSR15no signal672685397347679-1
ENSG00000124784RIOK15no signal6738972974182701
ENSG00000219294PIP5K1P15no signal6798673079884251
ENSG000002611895no signal675406847541571-1
ENSG00000111845PAK1IP15no signal610694928107100151
ENSG00000251164HULC5no signal6865237086540791
ENSG00000111843TMEM14C5no signal610723148107313621
ENSG00000111837MAK5no signal61076295610838764-1
ENSG00000222383RNA5SP2035no signal61075302410753159-1
ENSG000002718975no signal611607785116082141
ENSG00000078401EDN15no signal612290596122974271
ENSG000002074195no signal611710052117101931
ENSG00000212802RPL15P35no signal612514342125150061
ENSG00000223321RN7SKP2935no signal61240671812407013-1
ENSG000002723795no signal61329025013290722-1
ENSG00000145979TBC1D75no signal61326677413328815-1
ENSG00000010017RANBP95no signal61362173013711796-1
ENSG00000237786GFOD1-AS15no signal613486526134870841
ENSG000002330755no signal613817713138179661
ENSG00000180537RNF1825no signal613924677139805331
ENSG000002722095no signal613825663138268051
ENSG000002342615no signal61497701915090234-1
ENSG000002373465no signal61439146214393519-1
ENSG00000235488JARID2-AS15no signal61524804615248865-1
ENSG00000184612RPL7P265no signal61753113017531883-1
ENSG000002071935no signal61623246216232561-1
ENSG000002189765no signal61836696718368875-1
ENSG00000165097KDM1B5no signal618155560182240841
ENSG00000240869RN7SL128P5no signal62042181220422118-1
ENSG000002271165no signal61973065819734798-1
ENSG00000222431RNU6-141P5no signal62045260020452704-1
ENSG00000146038DCDC25no signal62417198424358280-1
ENSG000002016835no signal620500406205005071
ENSG00000111913FAM65B5no signal62479760125042238-1
ENSG00000222373RNY5P55no signal625192641251927181
ENSG00000214975PPIAP295no signal624976647249772101
ENSG00000224447HIST1H1PS25no signal626016607260168291
ENSG000002196815no signal625218916252192971
ENSG00000180573HIST1H2AC5no signal626124373261393441
ENSG00000197846HIST1H2BF5no signal626199748262009421
ENSG00000197409HIST1H3D5no signal62619706826199521-1
ENSG000002176484no signal61436633831436645201
ENSG00000112419PHACTR24no signal61438579821441523221
ENSG000002708904no signal6144179199144179826-1
ENSG00000118495PLAGL14no signal6144261437144385735-1
ENSG00000219297MRPL42P34no signal61444575871444579121
ENSG000002253114no signal6144632835144654437-1
ENSG000002168114no signal6146686067146686630-1
ENSG000001966344no signal61474800611475021281
ENSG000002262494no signal6148062570148064460-1
ENSG000002246584no signal6148558721148604544-1
ENSG00000215223CYP51A1P34no signal61487998291488018991
ENSG000002259244no signal6149564435149565137-1
ENSG00000177688SUMO44no signal61497214951497221771
ENSG000002333304no signal6149912891149913799-1
ENSG00000131023LATS14no signal6149979289150039392-1
ENSG000002150944no signal61502729691502733751
ENSG00000155918RAET1L4no signal6150339470150346668-1
ENSG000002265994no signal6150971908150973161-1
ENSG000002189964no signal61512561041512567021
ENSG00000202119RNU6-302P4no signal61512603581512604641
ENSG000002235984no signal6151409239151549582-1
ENSG00000131016AKAP124no signal61515611341516796921
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