Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H2342 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.66
Chromosome Average Copy Number: 4.39

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
1990911245833132no signal
1924596751288048796no signal
1928805036331732676no signal
1933175324394756037no signal
1939476803454998908no signal
1945500027473841924no signal
1947386131590978555no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000268654MIMT15no signal1957352270573599241
ENSG000002687235no signal195782857657828930-1
ENSG00000204524ZNF8055no signal1957751973577665031
ENSG000002686785no signal195786221657863380-1
ENSG000002695335no signal1957901252579313621
ENSG00000152433ZNF5475no signal1957874845578909331
ENSG00000251369ZNF5505no signal195804662558071231-1
ENSG00000152467ZSCAN15no signal1958545400585659991
ENSG00000177025C19orf185no signal195846980558485902-1
ENSG00000176293ZNF1355no signal1958570607585976771
ENSG00000268895A1BG-AS15no signal1958859117588665491
ENSG00000181894ZNF3295no signal195863761958666477-1
ENSG00000083838ZNF4465no signal1958985384589925971
ENSG00000249471ZNF324B5no signal1958962971589692001
ENSG00000265272RN7SL693P5no signal195900221459002488-1
ENSG00000268681COX6CP75no signal195000568950005896-1
ENSG00000126457PRMT15no signal1950179043501922861
ENSG00000104960PTOV15no signal1950353992503640011
ENSG00000010361FUZ5no signal195031012650320633-1
ENSG00000131398KCNC35no signal195081519450836772-1
ENSG000002695405no signal195056213950563489-1
ENSG00000269565GPR32P15no signal1951261639512624491
ENSG00000221241SNORD88A5no signal195130269951302789-1
ENSG000002683755no signal195129594251296841-1
ENSG000002286745no signal195143033451430831-1
ENSG00000142515KLK35no signal1951358171513640201
ENSG00000167759KLK135no signal195155946351568371-1
ENSG00000168995SIGLEC75no signal1951645556516567831
ENSG00000129437KLK145no signal195158075251587502-1
ENSG00000207550MIR99B5no signal1952195865521959341
ENSG00000160318CLDND25no signal195187035251872257-1
ENSG00000142556ZNF6145no signal195251601852533493-1
ENSG00000161551ZNF5775no signal195235905552394203-1
ENSG00000197608ZNF8415no signal195256771952599018-1
ENSG00000198482ZNF8085no signal1953030905530677171
ENSG000002678275no signal195263380152674786-1
ENSG00000123870ZNF137P5no signal1953091758531006601
ENSG00000167562ZNF7015no signal1953059075530904271
ENSG00000189190ZNF6005no signal195326744853290044-1
ENSG00000213020ZNF6115no signal195320606653238326-1
ENSG00000180257ZNF8165no signal195343038853466164-1
ENSG00000267809NDUFV2P15no signal195372722653728132-1
ENSG000002682825no signal1953507293535084031
ENSG00000239912RPL39P365no signal1953916443539165981
ENSG00000189348FAM90A27P5no signal1953784808537882001
ENSG00000198346ZNF8135no signal1953970989540069501
ENSG00000200393RNU6-698P5no signal1954156939541570451
ENSG000002696085no signal1954120056541205081
ENSG00000207594MIR520A5no signal1954194135541942191
ENSG00000207734MIR517A5no signal1954215522542156081
ENSG00000207722MIR520B5no signal1954204481542045411
ENSG00000252063RNU6-1041P5no signal195426334154263442-1
ENSG00000207981MIR519D5no signal1954216601542166881
ENSG00000269842MIR519A25no signal1954265215542674531
ENSG00000105619TFPT5no signal195461032054619055-1
ENSG00000199143MIR3735no signal1954291959542920271
ENSG000002350815no signal1954732911547340881
ENSG000002245795no signal195471296054713286-1
ENSG00000239961LILRA45no signal195484445654850421-1
ENSG000002351815no signal1955063253550635391
ENSG00000182909LENG95no signal195497298154974894-1
ENSG00000167633KIR3DL15no signal1955235969553784481
ENSG000002380945no signal1955119337551198431
ENSG000002671495no signal195553896155565296-1
ENSG00000022556NLRP25no signal1955464498555125101
ENSG00000080031PTPRH5no signal195569261655720874-1
ENSG00000160472TMEM1905no signal1955888204558896121
ENSG000002687295no signal195582339755823863-1
ENSG00000187902SHISA75no signal195594010755954230-1
ENSG000002670935no signal195591111355911787-1
ENSG000002670185no signal1956207681562087951
ENSG00000213015ZNF5805no signal1956146382561548351
ENSG000002006465no signal195682789356828005-1
ENSG00000198440ZNF5835no signal1956909335569474041
ENSG000002671455no signal195684965756850017-1
ENSG000002680365no signal1957125178571253191
ENSG00000197951ZNF715no signal1957106632571378491
ENSG000002684075no signal195730441657304617-1
ENSG000002683795no signal1957686601576892891
ENSG00000160460SPTBN48no signal1940972148410823701
ENSG00000160396HIPK48no signal194088517840896094-1
ENSG00000171570RAB4B-EGLN28no signal1941284147413141031
ENSG00000090006LTBP48no signal1941098789411357251
ENSG00000255974CYP2A68no signal194134944341356352-1
ENSG00000233622CYP2T2P8no signal194131443041317295-1
ENSG00000197446CYP2F18no signal1941620337416342711
ENSG00000167601AXL8no signal1941725108417676711
ENSG00000268529CYP2T3P8no signal1941640627416432131
ENSG00000269800PLEKHA3P18no signal194202740342028349-1
ENSG000002684758no signal1941931264419321421
ENSG000002680278no signal1942051554420618321
ENSG00000076928ARHGEF18no signal1942387228424343021
ENSG00000105388CEACAM58no signal1942212504422337181
ENSG000002548878no signal1942636707426412511
ENSG00000105404RABAC18no signal194246083342463542-1
ENSG00000236932CEACAMP88no signal194354002143545400-1
ENSG000002258778no signal1943326015433310301
ENSG00000243137PSG48no signal194369685443711451-1
ENSG00000131126TEX1018no signal1943905648439227631
ENSG00000204936CD1778no signal1943857811438674801
ENSG00000239948RN7SL368P8no signal194416465244164928-1
ENSG00000105767CADM48no signal194412652044143991-1
ENSG00000178386ZNF2238no signal1944555520445721441
ENSG000002671448no signal194452775644529414-1
ENSG00000265842RN7SL53P8no signal1944596257445965511
ENSG00000176761ZNF285B8no signal1944971858449774441
ENSG00000159915ZNF2338no signal1944754318447794701
ENSG000002672428no signal194497864544979403-1
ENSG00000230666CEACAM22P8no signal194504104545124119-1
ENSG00000176395CEACAM208no signal194500572945033811-1
ENSG00000130204TOMM408no signal1945393826454069461
ENSG000002522008no signal194522924845229322-1
ENSG00000234906APOC28no signal1945449243454528221
ENSG000002673484no signal194557976845593649-1
ENSG000002671148no signal194545330145457264-1
ENSG00000130201EXOC3L24no signal194571587945737469-1
ENSG000002683414no signal1945842445458426391
ENSG00000104879CKM4no signal194580967245826235-1
ENSG00000104967NOVA24no signal194643699246476804-1
ENSG00000125746EML24no signal194611025246148887-1
ENSG00000188624IGFL34no signal194662332846627931-1
ENSG000002680534no signal194661433746617121-1
ENSG00000204866IGFL24no signal1946646363466645561
ENSG00000124440HIF3A4no signal1946800303468466901
ENSG00000188293IGFL14no signal1946733009467345001
ENSG00000204851PNMAL24no signal194699016346999755-1
ENSG00000011485PPP5C4no signal1946850251468962381
ENSG00000130749ZC3H45no signal194756744447617009-1
ENSG00000090372STRN44no signal194722276447250251-1
ENSG00000142230SAE15no signal1947616531477138861
ENSG000002687465no signal1948110781482363551
ENSG00000257704PRR245no signal1947778142477789791
ENSG00000105516DBP5no signal194913328749140695-1
ENSG00000213035RPL23AP805no signal194829772448298147-1
ENSG00000176920FUT25no signal1949199228492092071
ENSG00000232871SEC1P5no signal1949141328491844611
ENSG00000174951FUT15no signal194925126849258647-1
ENSG00000105559PLEKHA45no signal194934035449371889-1
ENSG00000206758RNU6-317P5no signal194929640949296515-1
ENSG00000225950NTF45no signal194955905049568333-1
ENSG00000087086FTL5no signal1949468558494701351
ENSG000002650235no signal1949769740497698251
ENSG00000126453BCL2L125no signal1950168823501771731
ENSG000002676966no signal192812939128137391-1
ENSG000002617706no signal192824809228251757-1
ENSG000002669776no signal192834063828380130-1
ENSG00000267323SLC25A1P56no signal192829633128297113-1
ENSG000002676306no signal1928409851284202781
ENSG000002677686no signal192839926428399462-1
ENSG000002673206no signal192880761228877111-1
ENSG000002669766no signal1929097595291061361
ENSG000002607256no signal192890939028920397-1
ENSG000002675746no signal1929938945299392871
ENSG000002675286no signal1929374337294441521
ENSG000002669106no signal1930528330305290631
ENSG00000242100RPL9P326no signal193044727630447895-1
ENSG000002672236no signal193071057330719622-1
ENSG000002614006no signal193207894632086626-1
ENSG000002613166no signal1931398106314000621
ENSG00000242436RN7SL789P6no signal193314592033146214-1
ENSG000002690936no signal1932895915328964661
ENSG000002675576no signal1933157204331641161
ENSG000002670547no signal1933668962336695571
ENSG00000166359WDR887no signal1933622996336667011
ENSG000002675807no signal1933790840337920741
ENSG000002702127no signal193377488433776645-1
ENSG00000153879CEBPG7no signal1933864236338735921
ENSG00000249987RPS4XP207no signal193451356134514332-1
ENSG00000239253RPS4XP237no signal1934512564345128001
ENSG000002686837no signal193512902735131594-1
ENSG000002617547no signal193530249335305249-1
ENSG00000089335ZNF3027no signal1935168544351773021
ENSG00000105698USF27no signal1935759881357707241
ENSG000002678747no signal1935527238355279641
ENSG000002332147no signal193591496435915554-1
ENSG00000105672ETV27no signal1936132647361357731
ENSG000002249107no signal1936088809360924031
ENSG00000126264HCST7no signal1936393382363952791
ENSG000002674397no signal193623795836244316-1
ENSG00000239382ALKBH67no signal193650002236505141-1
ENSG00000126243LRFN37no signal1936426260364366691
ENSG000002707607no signal193663498336639250-1
ENSG00000196967ZNF585A7no signal193759763637663643-1
ENSG00000197050ZNF4207no signal1937498759376212161
ENSG000002676827no signal1937828138378286451
ENSG000002266867no signal1937742814377564371
ENSG00000188227ZNF7937no signal1937997841380396641
ENSG00000196381ZNF7817no signal193815865238183223-1
ENSG00000171817ZNF5407no signal1938042308381049981
ENSG00000011332DPF17no signal193870164638720354-1
ENSG00000105738SIPA1L37no signal1938397868386990121
ENSG00000188766SPRED37no signal1938879061388868811
ENSG00000099338CATSPERG7no signal1938826415388615891
ENSG000002680557no signal193902615739027768-1
ENSG00000196218RYR17no signal1938924339390782041
ENSG00000178934LGALS7B7no signal1939279851392823891
ENSG00000171747LGALS47no signal193929231139304004-1
ENSG00000207296RNU6-140P7no signal193928764239287749-1
ENSG00000104824HNRNPL7no signal193932702839342987-1
ENSG00000262484CCER27no signal193939962039402798-1
ENSG000002690507no signal1939360799393644031
ENSG00000128011LRFN18no signal193979720839805976-1
ENSG00000183709IFNL28no signal1939759154397607321
ENSG000001868388no signal1940005753400113261
ENSG00000006659LGALS148no signal1940194946402000841
ENSG000002695888no signal1940043674400459961
ENSG00000213921LEUTX8no signal1940267235402767751
ENSG00000105610KLF12no signal191299523712997995-1
ENSG000002676102no signal191318061013182188-1
ENSG00000072062PRKACA2no signal191420250014228896-1
ENSG00000160888IER22no signal1913261229132657221
ENSG00000187912CLEC17A2no signal1914693896147219691
ENSG00000123136DDX39A2no signal191451963114530192-1
ENSG00000269678OR7A18P2no signal191499765114997927-1
ENSG00000160961ZNF3332no signal1914800613148445581
ENSG00000074181NOTCH32no signal191527044415311792-1
ENSG00000105131EPHX32no signal191533773015344246-1
ENSG000002696352no signal191533182615333108-1
ENSG00000269516CYP4F23P2no signal1915674885156955201
ENSG00000141867BRD42no signal191534764715443356-1
ENSG00000171903CYP4F112no signal191602317716045677-1
ENSG00000243745RN7SL844P2no signal191650947716509770-1
ENSG00000127528KLF22no signal1916435628164386851
ENSG000002677032no signal1916551757165543951
ENSG00000127526SLC35E12no signal191666064216683193-1
ENSG00000085872CHERP2no signal191662870016653341-1
ENSG000002680562no signal191726339817278861-1
ENSG00000264250RN7SL835P2no signal1917018272170185311
ENSG00000099330OCEL12no signal1917337013173400281
ENSG000002690352no signal191754742017571613-1
ENSG00000141971MVB12A2no signal1917516531175445331
ENSG00000130475FCHO12no signal1917858527178993771
ENSG00000130313PGLS2no signal1917622438176320971
ENSG00000243455RPS18P132no signal1918159447181599001
ENSG00000252591RNA5SP4682no signal1918082834180829261
ENSG00000105664COMP2no signal191889358318902123-1
ENSG00000129933MAU22no signal1919431490194695631
ENSG000002676292no signal191936645119384178-1
ENSG000002704022no signal1919819774198212741
ENSG00000105726ATP13A12no signal191975600719774502-1
ENSG00000105708ZNF142no signal191982128019843906-1
ENSG000002674192no signal1919887411199457361
ENSG000002675812no signal191987184719932525-1
ENSG000002680702no signal1920144253201451411
ENSG00000256771ZNF2532no signal1919976695200054831
ENSG00000256229ZNF4862no signal1920278037203112991
ENSG000002715982no signal192120872121208847-1
ENSG00000118620ZNF4302no signal1921203426212428561
ENSG00000221147MIR1270-22no signal192057924020579322-1
ENSG00000268598VN1R80P2no signal1921246730212470671
ENSG00000240522RPL7AP102no signal192133245121333241-1
ENSG00000196705ZNF4312no signal1921324827213730341
ENSG00000268521VN1R83P2no signal192147235621472800-1
ENSG00000236312RPL34P342no signal192255140122551754-1
ENSG00000269505ZNF92P22no signal192231142922314736-1
ENSG000002688302no signal192263073622631579-1
ENSG000002697962no signal1922605315226088471
ENSG00000240713RN7SL860P2no signal1922784247227845391
ENSG00000268789VN1R87P2no signal192292572622926212-1
ENSG000002688232no signal1922786071227913031
ENSG00000269067ZNF7282no signal192315827023185978-1
ENSG000002214782no signal1923369034233691391
ENSG00000183850ZNF7302no signal1923258012233300211
ENSG00000196081ZNF724P2no signal192340440123433192-1
ENSG000002694712no signal1923386812233873581
ENSG000002698372no signal192343785523440741-1
ENSG00000205246RPSAP582no signal1923945807240109371
ENSG000002684552no signal1923778924237809611
ENSG000002693972no signal1924110590241120891
ENSG000002696622no signal192398172623982279-1
ENSG00000261824LINC006626no signal192817548828284848-1
ENSG00000206775SNORD372no signal1939825053982570-1
ENSG000002670112no signal1944579594471490-1
ENSG00000263974RN7SL121P2no signal19454520745454631
ENSG00000167676PLIN42no signal1945022044517716-1
ENSG00000105428ZNRF42no signal19545542654568671
ENSG000002215352no signal1948892154889310-1
ENSG00000156413FUT62no signal1958306215839742-1
ENSG00000233270SNRPEP42no signal1955766715576949-1
ENSG000002672992no signal19610933361258081
ENSG00000125648SLC25A232no signal1964360906465214-1
ENSG000002674272no signal1962103906212492-1
ENSG000002682032no signal19649433164948161
ENSG000001965892no signal1970193117021442-1
ENSG000002697612no signal1970050237006085-1
ENSG00000104883PEX11G2no signal1975417617562335-1
ENSG000002691632no signal19708706370879791
ENSG00000268297CLEC4GP12no signal19785243578555071
ENSG000002698132no signal19802400780248961
ENSG00000260001TGFBR3L2no signal19798103079839821
ENSG000002717172no signal1982870378304532-1
ENSG00000131142CCL252no signal19811765181275341
ENSG00000167775CD3202no signal1983670118373240-1
ENSG00000167772ANGPTL42no signal19842817384392571
ENSG00000267855NDUFA72no signal1983734908386280-1
ENSG00000133246PRAM12no signal1985549408567996-1
ENSG000002689312no signal1984882398492711-1
ENSG00000181733OR2Z12no signal19884131688423711
ENSG000002679862no signal19864604486475991
ENSG00000174667OR7D42no signal1993245269325542-1
ENSG000002669502no signal19990429799129771
ENSG000002672732no signal19960935496207551
ENSG000002669782no signal191036294410395784-1
ENSG000002672892no signal1999447559945689-1
ENSG00000220201ZGLP12no signal191041547910420556-1
ENSG000002671972no signal191060101510601676-1
ENSG00000161847RAVER12no signal191042688810444316-1
ENSG00000129351ILF32no signal1910764937108030931
ENSG00000129355CDKN2D2no signal191067713810679735-1
ENSG000002675442no signal1910952515109529261
ENSG00000265879MIR47482no signal1910890930108910111
ENSG00000130164LDLR2no signal1911200038112444921
ENSG00000105518TMEM2052no signal191145345211457194-1
ENSG00000130167TSPAN162no signal1911406824114376721
ENSG000002133032no signal1911634251116346461
ENSG000002672772no signal191147879911485611-1
ENSG000002669222no signal191183677611841598-1
ENSG000002196652no signal1912098432121570901
ENSG000002671792no signal1912035890120901051
ENSG00000257446ZNF8782no signal191215462012167127-1
ENSG000002347502no signal1912395152123960001
ENSG00000196646ZNF1362no signal1912273879123000641
ENSG00000196466ZNF7992no signal191250083012512085-1
ENSG00000198342ZNF4422no signal191246018512476719-1
ENSG00000180855ZNF4432no signal191254052112551926-1
ENSG00000235686PPIAP202no signal1912618943126190771
ENSG000001968262no signal191257237312662288-1
ENSG000002692422no signal191275464512759211-1
ENSG000002213432no signal1912740548127405991
ENSG00000123154WDR832no signal1912777614127866461
ENSG000002695902no signal191277564212780211-1
ENSG00000039987BEST22no signal1912862516128692721
ENSG00000105612DNASE22no signal191298602512992282-1
ENSG00000095066HOOK22no signal191287381712983554-1
ENSG000002224922no signal1913069669130697611
ENSG00000105549THEG2no signal19361750376013-1
ENSG000002676002no signal19229640230165-1
ENSG00000099821POLRMT2no signal19617223633597-1
ENSG00000099812MISP2no signal197511267643191
ENSG00000099864PALM2no signal197089537483291
ENSG00000197766CFD2no signal198594538634531
ENSG00000196415PRTN32no signal198409638481751
ENSG00000180448HMHA12no signal19106592210866271
ENSG00000099625C19orf262no signal1912282861238026-1
ENSG00000167468GPX42no signal19110393611067871
ENSG000002687982no signal19144083814419371
ENSG00000071655MBD32no signal1915766391592882-1
ENSG00000115255REEP62no signal19149116514979261
ENSG00000205922ONECUT32no signal19175237217809871
ENSG00000127540UQCR112no signal1915971711605480-1
ENSG000002671802no signal1920308522031050-1
ENSG00000180846CSNK1G2-AS12no signal1919525301954585-1
ENSG00000105694TCEB1P282no signal19253810825387861
ENSG00000125912NCLN2no signal19318556132095731
ENSG000002674122no signal1926101532611860-1
ENSG00000064961HMG20B2no signal19357277535790861
ENSG00000095932C19orf772no signal1934744053480540-1
ENSG00000186111PIP5K1C2no signal1936301813700477-1
ENSG00000006638TBXA2R2no signal1935945043606838-1
ENSG00000105278ZFR22no signal1938040223869030-1
ENSG00000167658EEF22no signal1939760543985467-1
ENSG00000077009NMRK22no signal19393310139424141
ENSG00000178951ZBTB7A2no signal1940443624066943-1
ENSG000002671925no signal1956898781568997931
ENSG00000127903ZNF8355no signal195717402057183151-1
ENSG000002697935no signal1957202054573110141
ENSG00000268483RPL7AP695no signal1957576702575775071
ENSG00000121417ZNF2115no signal1958141761581541471
ENSG000002689485no signal195820386858204128-1
ENSG000002693045no signal195833782958338146-1
ENSG00000196724ZNF4185no signal195843325258446761-1
ENSG00000166704ZNF6065no signal195848842158514717-1
ENSG00000235974VN2R19P5no signal195852395758537294-1
ENSG00000252211RNA5SP4735no signal1958874805588749291
ENSG00000130725UBE2M5no signal195906707959070327-1
ENSG000002683075no signal1958911588589120461
ENSG000002688545no signal195098337650986608-1
ENSG000002613415no signal195127939851289467-1
ENSG000002679685no signal1951333786513543451
ENSG00000167751KLK25no signal1951364824513838231
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