Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H2342 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.66
Chromosome Average Copy Number: 3.76

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
166077831639683no signal
16316469967296742no signal
16673019067549305no signal
166755414198114505no signal
1619813569203512317no signal
1620352748466344523no signal
1646637781483063944no signal
1648307968902875364no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000154118JPH34no signal1687635441877317621
ENSG000002391864no signal1687348326873484291
ENSG00000103335PIEZO14no signal168878175188851619-1
ENSG00000158717RNF1664no signal168876290388772829-1
ENSG000002694224no signal1688894366888945451
ENSG000002682184no signal1689334512893394521
ENSG00000129993CBFA2T34no signal168894126689043612-1
ENSG00000261373VPS9D1-AS14no signal1689778264897845731
ENSG00000197912SPG74no signal1689557325896241761
ENSG00000187741FANCA4no signal168980395789883065-1
ENSG00000182810DDX284no signal166805517968057770-1
ENSG00000141086CTRL4no signal166796154367966317-1
ENSG000002604414no signal166829006568294346-1
ENSG00000240435RPS12P274no signal1668243345682436811
ENSG00000103064SLC7A64no signal1668298433683357221
ENSG00000184939ZFP904no signal1668563993686099751
ENSG00000103061SLC7A6OS4no signal166831840668344849-1
ENSG000002001644no signal1669225026692251261
ENSG000002605774no signal166867928368680071-1
ENSG000002651134no signal1669274452692758321
ENSG000002599004no signal166936917969385633-1
ENSG000002603714no signal166936899469390209-1
ENSG000002524434no signal166981989769820016-1
ENSG000002616024no signal1669743777697444861
ENSG00000196696PDXDC2P4no signal167001020070099851-1
ENSG00000090857PDPR4no signal1670147529701952031
ENSG000002262324no signal167001029170030091-1
ENSG00000157349DDX19B4no signal1670323566703691861
ENSG000002697464no signal167023930370239683-1
ENSG00000103051COG44no signal167051447170557468-1
ENSG000002601114no signal1670413360704334051
ENSG000002233164no signal167090708770907216-1
ENSG000002616114no signal167148150371523214-1
ENSG000002597984no signal1671147255711479031
ENSG000002615134no signal1671757083717581331
ENSG000002610084no signal167245938472698908-1
ENSG00000102967DHODH4no signal1672042487720589541
ENSG000002612274no signal1673265954732678691
ENSG000002143314no signal167436630074402138-1
ENSG000002599724no signal167433910074369244-1
ENSG000002600924no signal167556243075579326-1
ENSG000002034724no signal1675509794755293051
ENSG00000065457ADAT14no signal167563087975657198-1
ENSG00000135702CHST54no signal167556243375569145-1
ENSG00000199299RNA5SP4304no signal167589494675895055-1
ENSG000002143254no signal167572836775734089-1
ENSG000002161314no signal167746990777469999-1
ENSG000002614724no signal1679539500795501901
ENSG000002617224no signal167924660879263350-1
ENSG000002613904no signal167975062279804460-1
ENSG00000178573MAF4no signal167961974079634611-1
ENSG000002602374no signal1680074559800796421
ENSG000002607374no signal168060069180606705-1
ENSG00000168589DYNLRB24no signal1680574631805846571
ENSG000002605944no signal1680770257807762021
ENSG000002653414no signal168069935880699460-1
ENSG000002601614no signal168215424382155374-1
ENSG000002611414no signal1681088906810900311
ENSG000002612854no signal168252959882544524-1
ENSG000002607884no signal168375472483806541-1
ENSG000002608624no signal1682806924828632431
ENSG000002602284no signal168382357283841439-1
ENSG000002506854no signal168422616484230659-1
ENSG000002604104no signal1684152898841547581
ENSG000002626014no signal1685204882852189691
ENSG00000140950TLDC14no signal168451168184587639-1
ENSG000002615674no signal1685391069853930551
ENSG000002688044no signal168596888785969829-1
ENSG00000154102C16orf744no signal168572369085784735-1
ENSG000002700584no signal168625502986256335-1
ENSG000002611774no signal168611501586123132-1
ENSG000002685324no signal1686320033863269951
ENSG000002437054no signal1687301791873019431
ENSG000002684734no signal168646843686469490-1
ENSG000002604504no signal1647999583480055981
ENSG00000212290RNA5SP4244no signal164748425847484372-1
ENSG000002600334no signal1648634087486345551
ENSG000002391384no signal164845503848455114-1
ENSG00000222170RNU6-257P4no signal164876561548765712-1
ENSG000002618154no signal1649204463492056971
ENSG000002614214no signal1649193419491959341
ENSG00000155393HEATR34no signal1650099852501402981
ENSG00000260024MRPS21P74no signal1649741917497421541
ENSG000002525264no signal165018555350185642-1
ENSG000002520774no signal165053207250532141-1
ENSG00000121274PAPD54no signal1650186829502692211
ENSG000002602494no signal1650700122507055501
ENSG000002054144no signal165063998750647595-1
ENSG000002606054no signal165106902951072675-1
ENSG000002701204no signal1650746755507475001
ENSG000002612384no signal1651183150511837301
ENSG000002612914no signal1653202434532033621
ENSG000002614704no signal1652112534521144011
ENSG000002599624no signal165339593153397590-1
ENSG000002610494no signal165406790954088495-1
ENSG00000103494RPGRIP1L4no signal165363159553737850-1
ENSG000002597254no signal165497169854972583-1
ENSG000002146964no signal1654146970541483781
ENSG000002592834no signal165529388155367500-1
ENSG000002600414no signal1656143449561709121
ENSG00000240760RPL31P564no signal165538663355387000-1
ENSG00000169688MT1B4no signal1656685811566871161
ENSG00000070915SLC12A34no signal1656899119569497621
ENSG00000102900NUP934no signal1656764017568787971
ENSG000002634414no signal1656991177569912731
ENSG000002611144no signal1656974940569756381
ENSG000002601454no signal165708641757092409-1
ENSG00000087237CETP4no signal1656995762570177571
ENSG000002600384no signal1657281262572824041
ENSG000002601484no signal165712512557126215-1
ENSG000002609654no signal1657355264573560291
ENSG00000166188ZNF3194no signal165802857258034357-1
ENSG000002604674no signal165771503657735642-1
ENSG000002609274no signal1658163433581930371
ENSG00000103005USB14no signal1658033450580555221
ENSG00000212379RNU6-269P4no signal165841195658412052-1
ENSG00000125166GOT24no signal165874103558768261-1
ENSG00000200556RNU6-103P4no signal1658530812585309181
ENSG000002612784no signal166005848260059045-1
ENSG000002386014no signal1659448677594487491
ENSG000002603324no signal166284212662842610-1
ENSG000002601154no signal1661952225619746011
ENSG000002610144no signal1663764181637886611
ENSG000002610284no signal166427651264377813-1
ENSG000002607154no signal1664189073641904781
ENSG000002616564no signal166650369966515133-1
ENSG000002598464no signal1664398684646341501
ENSG000002607554no signal1666543340665439511
ENSG000002654084no signal1666976615669971591
ENSG00000140932CMTM24no signal1666613351666221781
ENSG00000172824CES4A4no signal1667022492670436611
ENSG00000102981PARD6A4no signal1667694849676966811
ENSG000002598044no signal166759531467596212-1
ENSG00000141098GFOD24no signal166770843467753324-1
ENSG00000159761C16orf864no signal1667700719677026611
ENSG000002701654no signal166777249167773825-1
ENSG00000038358EDC44no signal1667906926679184061
ENSG00000102901CENPT4no signal166786206067881714-1
ENSG00000090905TNRC6A3no signal1624741016248389531
ENSG00000083093PALB23no signal162361448823652631-1
ENSG00000212382RNU6-159P3no signal1627874572278746771
ENSG00000266166RN7SL557P3no signal1625196528251968081
ENSG00000233232NPIPB73no signal162846769328481868-1
ENSG000002605703no signal162884193328848521-1
ENSG000002704243no signal162876128028761916-1
ENSG000002604423no signal162889027828891241-1
ENSG000002608533no signal162896800828978204-1
ENSG00000177548RABEP23no signal162891574228947847-1
ENSG000002609533no signal162927359429275800-1
ENSG000002609083no signal162906505329119429-1
ENSG000002546343no signal162943712129465435-1
ENSG00000266758MIR3680-1,MIR3680-23no signal162961050029610586-1
ENSG000002603353no signal1629460512294609461
ENSG000002380453no signal162981996629823306-1
ENSG00000103495MAZ3no signal1629817427298236491
ENSG00000214725CDIPT-AS13no signal1629874914298793711
ENSG000002631363no signal1629827832298314381
ENSG00000174943KCTD133no signal162991633329938356-1
ENSG000002614163no signal163019482630196278-1
ENSG00000167194C16orf923no signal1630034655300390571
ENSG00000169951ZNF7643no signal163056508530569819-1
ENSG00000169955ZNF7473no signal163053724430546668-1
ENSG000002615883no signal163059898330599241-1
ENSG00000099365STX1B3no signal163100057731021949-1
ENSG000002688633no signal163099680830997533-1
ENSG000002613853no signal1631142754311431981
ENSG00000167394ZNF6683no signal163107216431085641-1
ENSG000002633433no signal1631176969311772481
ENSG00000169896ITGAM3no signal1631271311313442131
ENSG00000261359C16orf983no signal1631213206312147731
ENSG000002614573no signal1631814268318192941
ENSG00000237185VN1R66P3no signal1631659628316605431
ENSG000001974763no signal1631973384319856821
ENSG000002598743no signal163188220831882445-1
ENSG000002606283no signal1631987124320150491
ENSG00000230267HERC2P43no signal163211456632199434-1
ENSG00000260048IGHV1OR16-33no signal1632070405320706931
ENSG000002608663no signal1632399456324475211
ENSG000002605843no signal1632128021321283181
ENSG000002615413no signal163246593332470079-1
ENSG000002609003no signal1633071257330714191
ENSG000002611113no signal163264699432647366-1
ENSG000002611973no signal1633817729338538281
ENSG000002606263no signal163333628333337443-1
ENSG000002656163no signal163394594933946021-1
ENSG000002565793no signal1634232106342324691
ENSG000002613313no signal1634213746342139861
ENSG000002613983no signal1634430150344319151
ENSG000001797553no signal1634256507342572781
ENSG000002598973no signal163448028734481905-1
ENSG000002611223no signal1634977639349908861
ENSG000002607463no signal163487299434879551-1
ENSG000002613563no signal1646605449466060481
ENSG00000261620HMGN2P413no signal163503724035037651-1
ENSG000002611314no signal164669460846695503-1
ENSG000002617884no signal164673728146737937-1
ENSG00000091651ORC64no signal1646723555467323061
ENSG00000140795MYLK34no signal164674089146824319-1
ENSG00000069345DNAJA24no signal164698929947007699-1
ENSG000002617254no signal1646884911468851661
ENSG000002227674no signal164734693847347032-1
ENSG00000171208NETO24no signal164711161447177908-1
ENSG00000172382PRSS273no signal1627624192770552-1
ENSG00000103145HCFC1R13no signal1630726213074287-1
ENSG000002701683no signal16305130130520171
ENSG00000008516MMP253no signal16309668231107271
ENSG00000162069CCDC64B3no signal1630776833086927-1
ENSG000002623703no signal1631269123137101-1
ENSG000002619713no signal1631019923109371-1
ENSG000002631772no signal1634199573420906-1
ENSG000002631052no signal1642301184233516-1
ENSG000002632122no signal16350807135655641
ENSG000002669942no signal1647801164802566-1
ENSG00000103426CORO7-PAM162no signal1643902524470495-1
ENSG00000103184SEC14L52no signal16500831850691591
ENSG000002212572no signal1658106885810789-1
ENSG00000153446C16orf892no signal1650941235116111-1
ENSG000002607645no signal1688252738825416-1
ENSG00000238417RNU7-63P5no signal1687993138799374-1
ENSG00000252927RNA5SP4045no signal16969395496940851
ENSG00000184857TMEM1865no signal1688742418891505-1
ENSG00000264305RN7SL99P5no signal1610499800105000741
ENSG000002621585no signal161081769310818474-1
ENSG00000213853EMP25no signal161062227910674555-1
ENSG00000178257PRM35no signal161136714411367452-1
ENSG00000103274NUBP15no signal1610837643108632081
ENSG00000122299ZC3H7A5no signal161184444211891123-1
ENSG00000241641RPS23P65no signal1612175094121757591
ENSG000002691215no signal161206200012062333-1
ENSG000002624545no signal1614396145144202101
ENSG000001756045no signal161218060312184159-1
ENSG00000199130MIR365A5no signal1614403142144032281
ENSG000002615235no signal161478942414800912-1
ENSG00000238964RNU7-125P5no signal1614737645147377061
ENSG000002577695no signal1615702331157044201
ENSG000002633355no signal1615820531158268501
ENSG00000072864NDE15no signal1615737124158202101
ENSG00000244257PKD1P15no signal1616404198164280471
ENSG000002631985no signal161638603516388663-1
ENSG000002611815no signal161648876916492451-1
ENSG000002067065no signal161640796916408068-1
ENSG000002575275no signal161850516618505708-1
ENSG000002602425no signal161809666318266920-1
ENSG000002614655no signal161907382119079013-1
ENSG00000103528SYT175no signal1619179293192796521
ENSG000002614275no signal1619125324191849001
ENSG000002613125no signal1619717673197267051
ENSG00000261210CLEC19A5no signal1619297061193334671
ENSG000002655247no signal1619901823199019191
ENSG000002605103no signal162075498520777942-1
ENSG000002607623no signal162059787220618429-1
ENSG00000103316CRYM3no signal162125019521314404-1
ENSG00000158486DNAH33no signal162094443321170762-1
ENSG00000189149CRYM-AS13no signal1621312170213299121
ENSG00000185864NPIPB43no signal162184589021892148-1
ENSG000001807473no signal162145800421531765-1
ENSG000002574083no signal1621950186219564511
ENSG000002387123no signal162190088821900991-1
ENSG00000058600POLR3E3no signal1622308730223464241
ENSG000002391723no signal1622492795224928981
ENSG000002606353no signal1622376442223803681
ENSG000002597823no signal162345776723458603-1
ENSG000002607413no signal162320619923224425-1
ENSG00000103356EARS23no signal162353333523569052-1
ENSG00000004779NDUFAB13no signal162359232323607677-1
ENSG00000103353UBFD13no signal1623568392235857101
ENSG00000188536HBA23no signal162228462237091
ENSG000002061683no signal162811332814711
ENSG00000206172HBA13no signal162266792275211
ENSG00000103126AXIN13no signal16337440402673-1
ENSG00000185615PDIA23no signal163331523372151
ENSG000002304283no signal165014045034611
ENSG00000127580WDR243no signal16734622740444-1
ENSG000002563233no signal165423665425671
ENSG00000103253HAGHL3no signal167769367855251
ENSG00000103254FAM173A3no signal167705817726011
ENSG000002604393no signal169710339844951
ENSG00000103245NARFL3no signal16779753791329-1
ENSG000002604963no signal1610411481050926-1
ENSG000002617203no signal16111524011165021
ENSG00000261713SSTR5-AS13no signal1611140931128707-1
ENSG000002599103no signal1612095481210176-1
ENSG000001817913no signal1611152991116349-1
ENSG00000116176TPSG13no signal1612716511275257-1
ENSG00000059145UNKL3no signal1614132061464752-1
ENSG00000197253TPSB23no signal1612772721280214-1
ENSG000002600513no signal16150176115026541
ENSG00000174109C16orf913no signal1614697451479345-1
ENSG00000206053HN1L3no signal16172825717522811
ENSG000002614303no signal1615176741522685-1
ENSG00000103024NME33no signal1618202871821731-1
ENSG00000265820MIR31773no signal16178498617850671
ENSG000002599473no signal16193911519404351
ENSG00000196408NOXO13no signal1620289182034193-1
ENSG00000207405SNORA643no signal1620129742013107-1
ENSG000002601073no signal16204765520483751
ENSG000002612403no signal16216233621633431
ENSG000002599333no signal16214143721454261
ENSG00000264004MIR47173no signal16232462123246921
ENSG00000167969ECI13no signal1622893962302301-1
ENSG000002602723no signal16254603325702191
ENSG00000140992PDPK13no signal16258796526531891
ENSG00000185883ATP6V0C3no signal16256387125702191
ENSG000002383214no signal1682487925824880231
ENSG00000263360RN7SL134P4no signal1682878060828783581
ENSG000002611034no signal168374378483751503-1
ENSG00000103150MLYCD4no signal1683932731839497871
ENSG000002612864no signal168449286584500967-1
ENSG00000103187COTL14no signal168459920084651683-1
ENSG000002652494no signal1684886574848866731
ENSG00000153786ZDHHC74no signal168500778785045141-1
ENSG00000222190MIR19104no signal168577522785775306-1
ENSG00000176678FOXL14no signal1686609974866153031
ENSG000002700824no signal1687360593873611901
ENSG00000140941MAP1LC3B4no signal1687417601874383851
ENSG000002615924no signal168743031087433901-1
ENSG000002699354no signal168763413287635796-1
ENSG000002703854no signal1687926561879273411
ENSG000002601664no signal1688120993881215381
ENSG000002601214no signal1688785023887868671
ENSG00000167515TRAPPC2L4no signal1688922628889290941
ENSG000002050184no signal1689006197890179321
ENSG000002616924no signal168948648389488634-1
ENSG00000178773CPNE74no signal1689642176896636541
ENSG00000158805ZNF2764no signal1689786808898073111
ENSG000002670484no signal1689972565899846411
ENSG00000258839MC1R4no signal1689978527899873851
ENSG000002589474no signal1689987800900051691
ENSG000002611724no signal169017698290234633-1
ENSG00000102970CCL174no signal1657438679574499741
ENSG000002603454no signal1657494967574966491
ENSG00000102978POLR2C4no signal1657496299575059221
ENSG00000159618GPR1144no signal1657576333576255931
ENSG00000206833RNU6-20P4no signal165786444057864546-1
ENSG000002652094no signal165790828857908434-1
ENSG00000070729CNGB14no signal165791750358005020-1
ENSG000002071734no signal165811697258117072-1
ENSG000002611514no signal165812595758126851-1
ENSG000002608674no signal1658231016582517091
ENSG00000103021CCDC1134no signal1658265061583177401
ENSG000002606004no signal166172566061727654-1
ENSG00000201289RN7SKP764no signal166177705861777380-1
ENSG00000207441RNU6-21P4no signal166222144462221550-1
ENSG00000261199UBE2FP24no signal166321451463214975-1
ENSG000002598474no signal166517565965210616-1
ENSG000002612344no signal166597209265972356-1
ENSG00000249961CCDC794no signal166678887966835523-1
ENSG00000168748CA74no signal1666878282668880561
ENSG000002656904no signal1667197288671997181
ENSG000002371024no signal166724425167260930-1
ENSG00000135740SLC9A54no signal1667271586673060931
ENSG00000196155PLEKHG44no signal1667311413673234021
ENSG00000168676KCTD194no signal166732333167360666-1
ENSG00000159714ZDHHC14no signal166742832267450736-1
ENSG00000159720ATP6V0D14no signal166747191767515140-1
ENSG00000039523FAM65A4no signal1667552321675806911
ENSG000002608944no signal166757620767576475-1
ENSG00000102904TSNAXIP14no signal1667840668678660511
ENSG00000168286THAP114no signal1667876213678780971
ENSG000002618844no signal166796351767969920-1
ENSG00000262962KARSP34no signal166803633568038855-1
ENSG000002614694no signal166827074868271570-1
ENSG00000260459FTLP144no signal1668856490688569731
ENSG00000207083RNU6-22P4no signal166920957469209680-1
ENSG00000168807SNTB24no signal1669221032693429551
ENSG00000103018CYB5B4no signal1669458428695001691
ENSG000002601084no signal1669497747695001671
ENSG000002526704no signal1669814940698150311
ENSG00000208017MIR1404no signal1669966984699670831
ENSG00000157322CLEC18A4no signal1669984810699981411
ENSG00000239118MIR1972-24no signal1670064249700643251
ENSG00000223496EXOSC64no signal167028413470285833-1
ENSG00000167377ZNF234no signal167148150071496998-1
ENSG000002608864no signal1671599692716120901
ENSG00000242176RPL39P314no signal167202505072025204-1
ENSG000002602524no signal1672118756721213421
ENSG000002617744no signal1672312167723124671
ENSG00000207514RNU6-385P4no signal1672410603724106591
ENSG000002606644no signal1672459847724630721
ENSG000002597684no signal1672699069728211431
ENSG000002612484no signal1674316313743214171
ENSG000002605394no signal167448132574483790-1
ENSG00000251794RNU6-237P4no signal1674490439744905091
ENSG000002617834no signal167541371675415158-1
ENSG00000205084TMEM2314no signal167557201575590184-1
ENSG00000152910CNTNAP44no signal1676311176765931351
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