Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NCI-H2342 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.66
Chromosome Average Copy Number: 4.27

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
11198510106217933no signal
1110622278106530234no signal
1110655021137103524no signal
1113710803242806562no signal
1124282210250030523no signal
1125004191256281461loss
1125633583311475993no signal
1131154320333637034no signal
1133364465349277925no signal
1134927867349788122no signal
1134985327349870626no signal
1134988854362846106no signal
1136286244511835764no signal
1151183695800998035no signal
1180100162823474954no signal
1182347862962668935no signal
1196271799977068244no signal
11977166099818957310gain
11981901541002786468no signal
111002857101063702767no signal
111063704841349447704no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000149418ST144no signal111300294571300802711
ENSG00000244451RPL34P214no signal11129952390129952676-1
ENSG00000166106ADAMTS154no signal111303188691303465321
ENSG00000196323ZBTB444no signal11130096572130184581-1
ENSG00000151503NCAPD34no signal11134020014134095348-1
ENSG000002215164no signal11130981830130981910-1
ENSG00000149328GLB1L24no signal111342017681342482351
ENSG00000151498ACAD84no signal111341233891341357491
ENSG000002553444no signal111345844361345858161
ENSG000002555124no signal11134931675134945793-1
ENSG00000170145SIK24no signal111114731151116015771
ENSG00000110777POU2AF14no signal11111222977111326355-1
ENSG00000149300C11orf524no signal111117887561117975961
ENSG000001702764no signal111117829661117895741
ENSG00000204370SDHD4no signal111119574971119903531
ENSG000002710254no signal11111907351111907587-1
ENSG000002474164no signal11112830002112834182-1
ENSG00000150782IL184no signal11112013974112034840-1
ENSG00000238998RNU7-187P4no signal111128480751128481421
ENSG00000201687RNU6-1107P4no signal111137300681137301711
ENSG00000265140MIR43014no signal11113320745113320810-1
ENSG00000166741NNMT4no signal111141285091141840071
ENSG00000149305HTR3B4no signal111137753991138172871
ENSG00000180425C11orf714no signal11114262165114271139-1
ENSG000002556894no signal111154530151154710571
ENSG000002702044no signal111143885861143890931
ENSG00000137656BUD134no signal11116618886116643704-1
ENSG000002379374no signal111165101391165289691
ENSG000002342684no signal11116906513116906767-1
ENSG00000149575SCN2B4no signal11118032666118047388-1
ENSG00000177103DSCAML14no signal11117298489117688240-1
ENSG000002544784no signal111186926041186927931
ENSG00000263889RN7SL86P4no signal111183011231183014191
ENSG00000110375UPK24no signal111187958731188292691
ENSG00000266398MIR36564no signal111188896541188897221
ENSG00000239726RN7SL688P4no signal111188019201188021841
ENSG00000160695VPS114no signal111189384031189526881
ENSG00000160703NLRX14no signal111190372771190547251
ENSG000002681924no signal11119027590119027930-1
ENSG000002544064no signal11119692013119692838-1
ENSG00000245248USP2-AS14no signal111192524881193973741
ENSG00000223265RNU6-592P4no signal11122449913122450015-1
ENSG000002547104no signal111230595101230989851
ENSG00000244641RPS26P434no signal11122920495122921061-1
ENSG00000254430OR6M3P4no signal11123732530123733229-1
ENSG00000255048OR8X1P4no signal11124274130124274998-1
ENSG00000255116SLC5A4P14no signal111241438661241444771
ENSG00000213182OR10D5P4no signal111239255771239264141
ENSG00000255510OR8A2P4no signal111243304301243313811
ENSG00000197125OR8B84no signal11124310022124311054-1
ENSG000002549374no signal11124408396124409230-1
ENSG00000200278RNA5SP3524no signal111245063551245064881
ENSG00000154143PANX34no signal111244813861244902521
ENSG000002549434no signal111247612001247620221
ENSG000002550454no signal11124614530124616233-1
ENSG00000165478HEPACAM4no signal11124789089124806308-1
ENSG00000150433TMEM2184no signal11124966398124981659-1
ENSG00000134955SLC37A24no signal111249329631249591311
ENSG000002549324no signal11125128522125136694-1
ENSG000002548804no signal11125028357125034505-1
ENSG00000222844RNU6-321P4no signal111251474481251475531
ENSG00000110060PUS34no signal11125763381125773116-1
ENSG00000254671STT3A-AS14no signal11125440180125462473-1
ENSG000002642994no signal111258277951258285471
ENSG000002550274no signal11125773142125808811-1
ENSG000002546944no signal11126078506126078922-1
ENSG00000150455TIRAP4no signal111261529601261687401
ENSG00000240098RN7SL351P4no signal111261149301261151751
ENSG000002549384no signal11126790084126810555-1
ENSG00000222774RN7SKP1214no signal11127275923127276227-1
ENSG000002729814no signal111269892211270096301
ENSG00000174370C11orf454no signal11128769460128775930-1
ENSG00000151704KCNJ14no signal11128706210128737268-1
ENSG000002155654no signal111299521031299523671
ENSG000002554495no signal117757745877581137-1
ENSG000002707014no signal118155347781553711-1
ENSG000002546495no signal1178099107781034511
ENSG000002525924no signal118228305182283122-1
ENSG000002422795no signal1182668465826692581
ENSG000002544415no signal1182546551825482641
ENSG00000137494ANKRD425no signal1182904781829717361
ENSG00000255051BCAS2P15no signal1182843098828457791
ENSG000002564665no signal118316764983168256-1
ENSG00000137504CREBZF5no signal118537075285393951-1
ENSG000002401745no signal1184351036843516081
ENSG000002546995no signal118590382985904524-1
ENSG000002550055no signal118562754585634725-1
ENSG00000197882OR7E13P5no signal118654358286544491-1
ENSG00000166575TMEM1355no signal1186748886870348001
ENSG00000174804FZD45no signal118665672186666433-1
ENSG00000266581MIR31665no signal1187909670879097611
ENSG000002550225no signal1187527116875274161
ENSG00000255082GRM5-AS15no signal1188237744882572221
ENSG000002044565no signal118949960889502004-1
ENSG00000168959GRM55no signal118823774488799113-1
ENSG000002551625no signal1189519113895210061
ENSG00000168930TRIM495no signal118953082389541743-1
ENSG000002552855no signal118952258089522901-1
ENSG00000189253TRIM64B5no signal118960245089609185-1
ENSG00000166013TRIM53BP5no signal1189575165895841381
ENSG000002552355no signal118961709589619381-1
ENSG00000204449TRIM49C5no signal1189764274898065581
ENSG00000237706TRIM51EP5no signal118971460989724840-1
ENSG000002553325no signal1191527528915454601
ENSG00000110172CHORDC15no signal118993432889956532-1
ENSG000002548745no signal1192698963926997691
ENSG00000207304SNORA85no signal119346552793465665-1
ENSG00000202314SNORD65no signal119346466893464740-1
ENSG00000150316CWC155no signal119469578794706776-1
ENSG000002558935no signal119420607494206736-1
ENSG00000077458FAM76B5no signal119550210695523573-1
ENSG000002706895no signal1194876801948782891
ENSG0000025550210gain119774978197813762-1
ENSG000002429935no signal1195696383956967881
ENSG0000025455510gain119777925397779537-1
ENSG000002560357no signal11102677679102678647-1
ENSG000002557987no signal111025520411025546441
ENSG00000187240DYNC2H17no signal111029801601033505911
ENSG00000137745MMP137no signal11102813724102826463-1
ENSG000002553507no signal11103275037103276562-1
ENSG00000255430CASP1P17no signal11104993388104994066-1
ENSG00000253245MTND1P367no signal11103278169103279104-1
ENSG00000152578GRIA47no signal111054807211058528191
ENSG000002549987no signal11105028654105402424-1
ENSG00000170903MSANTD47no signal11105866350105893130-1
ENSG000002709694no signal11107456627107457629-1
ENSG000002550657no signal111061807721061825181
ENSG000002406524no signal111077791461077794901
ENSG000002686024no signal111075829981075951351
ENSG00000179331RAB39A4no signal111077992291078342081
ENSG00000201243RNU6-654P4no signal111088762441088763501
ENSG00000166266CUL54no signal111078794591079785031
ENSG000002544824no signal11109508194109508854-1
ENSG000002544164no signal111102258551102771241
ENSG00000254798TFAMP24no signal11109777730109778467-1
ENSG000002702024no signal11110977784110978474-1
ENSG000002713904no signal11110960594110961092-1
ENSG00000150750C11orf534no signal111111267071111571261
ENSG00000265874MIR44895no signal1165416663654167241
ENSG000001758275no signal116554509265547316-1
ENSG00000175376EIF1AD5no signal116576401665769647-1
ENSG00000172732MUS815no signal1165624597656351241
ENSG000002544615no signal116602703866029305-1
ENSG00000174996KLC25no signal1166024765660353311
ENSG000002547565no signal1166101965661073461
ENSG000002544525no signal116604425066044963-1
ENSG000002017335no signal1166200234662003731
ENSG00000199325RNU4-39P5no signal116638243566382561-1
ENSG00000174080CTSF5no signal116633093466336312-1
ENSG00000239099RNU7-23P5no signal1166687233666872941
ENSG00000173914RBM4B5no signal116643246966445392-1
ENSG000002388925no signal1166988379669884871
ENSG00000175544CABP45no signal1167219877672266991
ENSG00000172830SSH35no signal1167070919670800781
ENSG000002699135no signal1167227339672277841
ENSG000002278345no signal116741904767420875-1
ENSG00000231793DOC2GP5no signal116738012467383728-1
ENSG00000227620ALG1L8P5no signal1167552744675598061
ENSG000002548835no signal1167511793675121161
ENSG00000206587RNU6-46P5no signal1167663102676632081
ENSG00000110721CHKA5no signal116782032667888911-1
ENSG000002215535no signal1167700685677008331
ENSG00000171067C11orf245no signal116802880368039469-1
ENSG00000172938MRGPRD5no signal116874749068748455-1
ENSG000002668545no signal1168386967683870631
ENSG00000162341TPCN25no signal1168816365688580721
ENSG000002612765no signal1168771862687725681
ENSG000002683515no signal116958725469587718-1
ENSG00000172927MYEOV5no signal1169061605691824941
ENSG000002468895no signal117021835270244594-1
ENSG00000186895FGF35no signal116962499269633792-1
ENSG00000162105SHANK25no signal117031396170963623-1
ENSG00000204571KRTAP5-115no signal117129290171314399-1
ENSG000002546825no signal1171159720711632031
ENSG000002548055no signal117140149971401703-1
ENSG000002554155no signal1171340091713404671
ENSG000002511435no signal1171725337717319561
ENSG00000254593OR7E126P5no signal1171614240716151271
ENSG00000110200ANAPC155no signal117181742471823826-1
ENSG000002025225no signal1172477049724771611
ENSG000002380485no signal1172231030722327771
ENSG000002462115no signal1174022407740357501
ENSG00000137478FCHSD25no signal117254779072853306-1
ENSG00000255444CYCSP275no signal1174193295741935871
ENSG00000242999RN7SL239P5no signal1174556955745572511
ENSG00000265902MIR46965no signal117443131374431382-1
ENSG00000199090MIR3265no signal117504613675046230-1
ENSG000002549635no signal1174975333749762141
ENSG000002546305no signal117534692875349632-1
ENSG00000198382UVRAG5no signal1175526212758542391
ENSG000002548265no signal1175486949754879741
ENSG000002549155no signal117565317375653479-1
ENSG000002017565no signal117611518476115296-1
ENSG00000137492PRKRIR5no signal117606100076092015-1
ENSG00000137507LRRC325no signal117636856876381791-1
ENSG000002548105no signal117636521376367756-1
ENSG00000204529GUCY2EP5no signal117640508776418685-1
ENSG00000198488B3GNT65no signal1176745385767530961
ENSG000002615785no signal1176511408765155991
ENSG00000255409RSF1-IT15no signal117744972577450613-1
ENSG00000178795GDPD45no signal117692760377012732-1
ENSG00000252494RNU6-126P5no signal117784446677844568-1
ENSG00000254601CYCSP265no signal1157772858577731771
ENSG00000172772OR10W15no signal115803426458035732-1
ENSG00000149124GLYAT5no signal115840789958499447-1
ENSG00000255431OR5B19P5no signal115811121058112137-1
ENSG000002549265no signal115851647258528526-1
ENSG000001972545no signal1158452559584593411
ENSG000002241305no signal1158672897586760711
ENSG00000254717GLYATL1P25no signal1158645775586609331
ENSG00000197629MPEG15no signal115897598358980424-1
ENSG00000176495OR5AN15no signal1159131885591329211
ENSG000002547045no signal115905481259056959-1
ENSG000002546405no signal1159235717592361301
ENSG00000172742OR4D95no signal1159282386592833301
ENSG00000176200OR4D115no signal1159271049592719841
ENSG00000214788OOSP15no signal1159705928597128071
ENSG00000264559MIR31625no signal115936255059362631-1
ENSG00000166928MS4A145no signal1160146003601851611
ENSG00000181995LINC003015no signal1160383209604546221
ENSG00000166930MS4A55no signal1160197062602226871
ENSG00000149506ZP15no signal1160635035606431661
ENSG00000256713PGA55no signal1161008514610189201
ENSG00000013725CD65no signal1160739115607878491
ENSG00000011347SYT75no signal116128278561348620-1
ENSG00000149483TMEM1385no signal1161129473611369811
ENSG00000200898RNU6-1243P5no signal1161705366617054721
ENSG000002564435no signal116130698861309731-1
ENSG00000124939SCGB2A15no signal1161976140619814081
ENSG00000149503INCENP5no signal1161891445619206351
ENSG000002544045no signal116198089962028021-1
ENSG000002551265no signal116215898862160844-1
ENSG00000110484SCGB2A25no signal1162037627620406281
ENSG00000255508MIR36545no signal116232707562359003-1
ENSG00000254772EEF1G5no signal116232707362342401-1
ENSG00000162227TAF6L5no signal1162538775625548141
ENSG000002568635no signal116300542963006586-1
ENSG00000241082RN7SL259P5no signal116270345662703706-1
ENSG000002035205no signal1163383780633891431
ENSG00000133317LGALS125no signal1163273556632842461
ENSG00000168005C11orf845no signal1163580860635951901
ENSG000002711005no signal116346606863466236-1
ENSG00000167770OTUB15no signal1163753325637692831
ENSG00000173486FKBP25no signal1164008475640116041
ENSG000002561165no signal116399668664001824-1
ENSG000002070245no signal1164063509640636101
ENSG000001819085no signal1164216546642191261
ENSG000002316805no signal116416181464163303-1
ENSG00000068976PYGM5no signal116451386164527769-1
ENSG00000168065SLC22A115no signal1164323098643403471
ENSG00000171219CDC42BPG5no signal116459085964612041-1
ENSG000002678045no signal116465815864658547-1
ENSG00000110047EHD15no signal116461911464655768-1
ENSG00000207648MIR1925no signal116465860964658718-1
ENSG000002707755no signal116479286264793987-1
ENSG00000168062BATF25no signal116475541564764517-1
ENSG00000162298SYVN15no signal116488925264902004-1
ENSG00000174276ZNHIT25no signal116488387564885170-1
ENSG000002546145no signal116494507764949305-1
ENSG00000254455HIGD1AP105no signal116491316264913443-1
ENSG00000162241SLC25A455no signal116514266365151172-1
ENSG00000014216CAPN15no signal1164948037649794771
ENSG000002701175no signal116526548165265876-1
ENSG00000266041MIR46905no signal1165403781654038401
ENSG00000173465SSSCA15no signal1165337901653414131
ENSG00000214659KRT8P265no signal1165494410654956851
ENSG000002125514no signal1132103310321035181
ENSG000002545085no signal1133796245337972161
ENSG000002551695no signal1133826314338271871
ENSG000002552725no signal1133797734338010411
ENSG000002704915no signal1134764453347647461
ENSG000002018675no signal1134210721342108221
ENSG000002555216no signal113515420235159579-1
ENSG00000179431FJX16no signal1135639735356424191
ENSG000002153806no signal1135395812353960211
ENSG000002546866no signal1135678242356828871
ENSG000002552794no signal1141877470418975471
ENSG000002412286no signal113601877636019225-1
ENSG000002549074no signal114335029843380846-1
ENSG000002547254no signal114308723643087626-1
ENSG000002526524no signal1143352811433529061
ENSG00000149084HSD17B124no signal1143577986438781671
ENSG00000252355RN7SKP2874no signal114345668243456947-1
ENSG00000052850ALX44no signal114428199444331716-1
ENSG000002545124no signal1143755309437561141
ENSG00000157570TSPAN184no signal1144748015449539721
ENSG000002554514no signal1144490014444919791
ENSG000002547464no signal114551123945564024-1
ENSG000002544974no signal1145275435452762001
ENSG000002051064no signal1145792983457939091
ENSG000002553144no signal1146193498461986561
ENSG000002635394no signal114613467346134769-1
ENSG00000175220ARHGAP14no signal114669863046722165-1
ENSG000002552694no signal114623537246237409-1
ENSG00000175213ZNF4084no signal1146722368467274621
ENSG00000247675LRP4-AS14no signal1146867963468959471
ENSG000002524274no signal114678031646780423-1
ENSG00000123444KBTBD44no signal114759374947600567-1
ENSG00000165917RAPSN4no signal114745930847470730-1
ENSG00000109919MTCH24no signal114763886747664175-1
ENSG000002318804no signal1147599277475998231
ENSG000002528744no signal114784175547841844-1
ENSG00000184789OR4C10P4no signal114845376948454699-1
ENSG00000263693MIR31614no signal1148118334481184101
ENSG000002549204no signal1148914808489202551
ENSG000002550014no signal1150249920502501041
ENSG000002548014no signal114909230449092552-1
ENSG000002548285no signal115506976655072536-1
ENSG000002545184no signal1150257750502638271
ENSG00000255196OR4A17P5no signal1155211911552128141
ENSG00000181927OR4P45no signal1155405834554067721
ENSG00000254962OR4A14P5no signal1155245027552459851
ENSG00000254841OR4V1P5no signal1155441012554421511
ENSG00000205029OR5D165no signal1155606228556072141
ENSG00000254457OR5D2P5no signal1155482472554831081
ENSG00000172489OR5T35no signal1156019676560206981
ENSG00000186124OR9M1P5no signal1155623068556239881
ENSG00000255223OR5M115no signal115630974656310757-1
ENSG00000172199OR8U15no signal1156143100561440291
ENSG00000172464OR5AP25no signal115640894256409947-1
ENSG00000254834OR5M105no signal115634421256345263-1
ENSG000002549535no signal115650379256503938-1
ENSG00000183908LRRC555no signal1156949221569591911
ENSG00000181325OR9G3P5no signal1156507655565085721
ENSG000002546625no signal1157093077570954321
ENSG00000134817APLNR5no signal115700105157004709-1
ENSG00000149136SSRP15no signal115709345957103351-1
ENSG00000180714OR5AZ1P5no signal115768476957685711-1
ENSG00000156587UBE2L65no signal115731912957335757-1
ENSG00000172774OR1S15no signal1157982217579831951
ENSG00000202147RNA5SP3293no signal11603822660383441
ENSG00000175485OR52W13no signal11622037662214891
ENSG000002652643no signal11650271565302081
ENSG00000132254ARFIP23no signal1164969106502666-1
ENSG000002545953no signal1165094166510607-1
ENSG00000254838GVINP13no signal1167347676767670-1
ENSG00000166333ILK3no signal11662496166321021
ENSG000002717583no signal1177261757904494-1
ENSG00000170743SYT93no signal11726000974902731
ENSG000002547073no signal11772683577310641
ENSG00000182261NLRP103no signal1179809717986973-1
ENSG00000252769RNU6-943P3no signal1179107297910826-1
ENSG00000175352NRIP33no signal1190021239025596-1
ENSG00000166405RIC33no signal1181275978190602-1
ENSG00000201998SNORA233no signal11945032094505011
ENSG00000264984MIR56913no signal1191118599111926-1
ENSG000002544014no signal1111139401112051581
ENSG00000133800LYVE13no signal111057851310633236-1
ENSG00000266645MIR42994no signal111167819811678269-1
ENSG000002550674no signal1112870342128709801
ENSG00000170242USP474no signal1111862970119808701
ENSG000002006854no signal111370809713708205-1
ENSG00000222162RN7SKP1514no signal1113374755133750701
ENSG000002550752no signal1113777574137791071
ENSG00000152270PDE3B2no signal1114665269148923501
ENSG000002562062no signal111451532914541890-1
ENSG000002547892no signal111559356915643937-1
ENSG000002549462no signal1115574401156126441
ENSG000002443982no signal111699624016996560-1
ENSG00000201403SNORD14B2no signal111709732617097415-1
ENSG00000184669OR7E14P2no signal1117035545170745831
ENSG00000006611USH1C2no signal111751544217565963-1
ENSG00000070081NUCB22no signal1117229700173715211
ENSG00000179817MRGPRX42no signal1118194384181958271
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