Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NB-1 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 1.94
Chromosome Average Copy Number: 0.09

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
Y59017912590219831no signal
Y59021988590221030loss
Y20426567206364951no signal
Y595912459650053no signal
Y567773157959031no signal
Y553421656777200loss
Y579670159508840loss
Y265043929460260loss
Y383753545510241no signal
Y28738292589685890loss
Y493830950131660loss
Y952657396537522no signal
Y58976953589775230loss
Y596516360912670loss
Y26333594264728373no signal
Y351446336272790loss
Y455376947775140loss
Y519479252673102no signal
Y59017392590178860loss
Y19458943194717154no signal
Y19472113197095820loss
Y58977828590173782no signal
Y59022205590310392no signal
Y59031209590323310loss
Y59032457590328092no signal
Y295132435040561no signal
Y501541850569601no signal
Y505714951921110loss
Y14423723144238683no signal
Y680858095259150loss
Y530932755323031no signal
Y58968625589703511no signal
Y477974849335921no signal
Y609444564493971no signal
Y363029637088681no signal
Y371164838275320loss
Y26949116277237751no signal
Y526784453093210loss
Y678864968034322no signal
Y19710530197252903no signal
Y965745999586240loss
Y9958662100110932no signal
Y26473957269490480loss
Y27727174286278580loss
Y28628975287354491no signal
Y645551564880410loss
Y649085466292271no signal
Y663269567880780loss
Y10012012144219450loss
Y14425861194583900loss
Y19727695204260140loss
Y20642483211316070loss
Y21133113214142931no signal
Y21415181236523190loss
Y23653199237597262no signal
Y23759882263330650loss

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG000001733570lossY877426587841141
ENSG00000099725PRKY0lossY714201372495891
ENSG00000147753TTTY71no signalY631750963259471
ENSG000002428791no signalY617575161776281
ENSG000002293081no signalY390453839683611
ENSG00000225653RNF19BPY1no signalY36460383647587-1
ENSG00000184895SRY0lossY26548962655740-1
ENSG00000251766RNA5SP5180lossY99280199928137-1
ENSG00000236718RBMY2QP0lossY98600989871796-1
ENSG00000228890TTTY212no signalY95552629558905-1
ENSG00000147761TTTY7B2no signalY95444339552871-1
ENSG00000231436RBMY3AP0lossY94481809458885-1
ENSG00000236424TSPY100lossY936548993682911
ENSG00000258992TSPY10lossY923607693073571
ENSG00000229549TSPY80lossY919540692184791
ENSG00000232808TTTY200lossY91674899172441-1
ENSG000002520380lossY1973494119735035-1
ENSG000002651970lossY1839812718398238-1
ENSG000002662200lossY1636406516364171-1
ENSG000002526940lossY1577984015779936-1
ENSG00000183878UTY0lossY1536025915592553-1
ENSG00000235462TAB3P10lossY1526584215274125-1
ENSG00000233774MED14P10lossY1473091514746333-1
ENSG00000232730FAM8A4P0lossY14442350144435621
ENSG00000270455PABPC1P50lossY13491303134933691
ENSG000002356910lossY992841199288161
ENSG00000131007TTTY9B0lossY2074309220752407-1
ENSG00000230458GPM6BP10lossY20740303207404461
ENSG00000250951USP9YP10lossY20702866207060141
ENSG000002515100lossY20653626207095841
ENSG00000229406OFD1P4Y1no signalY2061503620634023-1
ENSG00000233522FAM224A1no signalY20488139205150961
ENSG00000237616USP9YP320lossY2010708120109132-1
ENSG00000129873CDY2B0lossY1998929019992100-1
ENSG000002258960lossY19838632198389601
ENSG000002282572no signalY2369372523695897-1
ENSG00000223637RBMY2EP0lossY2355687723563471-1
ENSG000002269180lossY23473154234807811
ENSG00000224482HSFY4P0lossY2297066222973695-1
ENSG00000225624TBL1YP10lossY22889140229047861
ENSG00000198692EIF1AY0lossY22737611227550401
ENSG000002601970lossY2185382721856492-1
ENSG00000234529GAPDHP190lossY21489455214904591
ENSG00000235479RAB9AP40lossY20811557208121651
ENSG00000248792LINC00266-2P3no signalY26424828264374931
ENSG00000172352CDY1B0lossY2619137626194166-1
ENSG00000231540TCEB1P90lossY2595496825955206-1
ENSG00000236620XKRYP30lossY2586206925872955-1
ENSG00000205936PPP1R12BP20lossY25525631255388441
ENSG00000188120DAZ10lossY2527550225345241-1
ENSG00000215537ZNF736P11Y0lossY2501269125013903-1
ENSG00000169789PRY0lossY24636544246607841
ENSG00000229416USP9YP80lossY2383913223843004-1
ENSG000002693930lossY2811177628114889-1
ENSG00000237546XKRYP60lossY28089415281002991
ENSG00000227635USP9YP210lossY2807998028082028-1
ENSG00000172288CDY10lossY27768264277710491
ENSG00000197092GOLGA6L16P1no signalY2764179827648105-1
ENSG00000239304DNM1P481no signalY27632787276334691
ENSG00000228296TTTY4C1no signalY2720923027246039-1
ENSG00000187191DAZ30lossY2690921626959626-1
ENSG00000232003ZNF736P12Y0lossY2664641026647652-1
ENSG000002258760lossY2839049828390720-1
ENSG00000233156HSFY8P0lossY28157582281583841
ENSG00000232583GPR143P0lossY69687746974543-1
ENSG00000224953SRIP31no signalY65870036587221-1
ENSG000002358951no signalY63610176364798-1
ENSG00000229643LINC002801no signalY62252606229454-1
ENSG00000252468RNU2-57P1no signalY488711748873071
ENSG00000229518UBE2V1P30lossY37343473734763-1
ENSG00000216777PRRC2CP11no signalY34176933417851-1
ENSG00000233070ZFY-AS10lossY28348852870667-1
ENSG00000232195TOMM22P20lossY269602326962591
ENSG000002700730lossY934520593477841
ENSG00000188656TSPY7P0lossY921573192184801
ENSG00000232924TCEB1P40lossY906852490688561
ENSG00000224408USP9YP220lossY902130390234121
ENSG000002300250lossY88397928842136-1
ENSG000002282070lossY87692448771317-1
ENSG00000244246ZNF736P8Y0lossY77814637782131-1
ENSG00000234795RFTN1P10lossY75810267677302-1
ENSG000002234220lossY754694075490691
ENSG00000233864TTTY150lossY14774265148041621
ENSG00000243980RN7SL702P0lossY14394177143944651
ENSG00000232226ARSFP10lossY1437302514378737-1
ENSG00000236477RPS24P10lossY14365457143661621
ENSG000002528550lossY1334055113340633-1
ENSG00000237447CDC27P20lossY1002798610029907-1
ENSG00000243643TSPY20P0lossY987380498759841
ENSG00000234110TSPY25P0lossY946179294639611
ENSG00000234803FAM197Y20lossY93552089364506-1
ENSG00000230377TCEB1P70lossY2069421220694542-1
ENSG00000252209RNU1-48P0lossY20648397206485581
ENSG00000232899CDY9P0lossY2034472120346300-1
ENSG00000252166RNU1-95P0lossY20278734202788931
ENSG00000226611OFD1P2Y0lossY2024256720258088-1
ENSG00000233378USP9YP340lossY20096229201051401
ENSG00000226116USP9YP60lossY2002457920033510-1
ENSG00000227949CYCSP460lossY1705342717053630-1
ENSG000002235170lossY1638809216389369-1
ENSG00000228411CDY4P0lossY1491390614915763-1
ENSG000002357190lossY2362727023629049-1
ENSG00000237269RBMY2TP0lossY2359258323599131-1
ENSG00000012817KDM5D0lossY2186575121906825-1
ENSG000002690840lossY2173789521738068-1
ENSG00000176728TTTY140lossY2103438721239302-1
ENSG00000169953HSFY20lossY2089332620990548-1
ENSG00000242153OFD1P6Y0lossY20835919209010831
ENSG00000249606TRAPPC2P70lossY2081740620818076-1
ENSG00000240438OFD1P5Y0lossY2074394920790963-1
ENSG00000226906TTTY40lossY25082602251194311
ENSG00000234131TCEB1P80lossY2466338924663720-1
ENSG00000225615RBMY2UP0lossY24344576243498591
ENSG000002379680lossY24086159240877401
ENSG00000226092RBMY2AP0lossY2407366824083297-1
ENSG000002516180lossY24041541240437061
ENSG00000226042CDY10P0lossY2379936123800927-1
ENSG00000234414RBMY1A12no signalY23673258237112121
ENSG00000242875RBMY1B2no signalY23673224236876721
ENSG00000225256TRAPPC2P50lossY27845598278487091
ENSG00000236379ZNF736P4Y1no signalY27314746273159881
ENSG00000233740CICP23no signalY2642448426427287-1
ENSG00000224827LINC00265-2P3no signalY26422392264231731
ENSG00000244231CSPG4P2Y0lossY2632958126333378-1
ENSG00000251917RNU1-86P0lossY2609276526092918-1
ENSG00000223407USP9YP180lossY2580561325813969-1
ENSG00000225466OFD1P10Y0lossY25727742257607871
ENSG000002440000lossY25163210251639681
ENSG00000235857CTBP2P12no signalY59001391590016351
ENSG00000227629SLC25A15P11no signalY2873278928737748-1
ENSG00000188399ANKRD36P10lossY28555962285666821
ENSG00000172283PRYP40lossY28121660281342161
ENSG00000252625RNU1-40P0lossY28075126280752891
ENSG00000215580BCORP10lossY2161731721665039-1
ENSG00000252766RNU6-255P1no signalY2118086921180973-1
ENSG00000232914TRAPPC2P40lossY28050665280533971
ENSG00000223406XKRYP50lossY27898535278990171
ENSG00000223856RAB9AP20lossY2785605527859704-1
ENSG00000237823CDY19P1no signalY2771026927712180-1
ENSG00000233944LINC00265-3P1no signalY2753930127540203-1
ENSG00000223641TTTY17C1no signalY2732979027330920-1
ENSG00000232585OFD1P12Y0lossY26118927261412281
ENSG00000223362CDY15P0lossY2600166926003238-1
ENSG00000224866USP9YP250lossY25880340258823961
ENSG00000252948RNU6-1314P0lossY28507136285072391
ENSG00000252155RNU6-941P0lossY724671372468201
ENSG00000233634GOT2P50lossY670574867062931
ENSG00000234583TSPY19P1no signalY61719986173115-1
ENSG00000168757TSPY21no signalY611426461170601
ENSG000002694640lossY53066915312605-1
ENSG00000225878SERBP1P20lossY46697264670889-1
ENSG00000237659RNASEH2CP10lossY265786826583691
ENSG000002283792no signalY965092496551221
ENSG00000226223TSPY16P0lossY94778589478325-1
ENSG00000230066FAM197Y30lossY93348969342768-1
ENSG00000237802FAM197Y60lossY92257319233636-1
ENSG00000228383FAM197Y70lossY92054129235047-1
ENSG00000231988OFD1P3Y0lossY889863589080291
ENSG00000233699TTTY180lossY85514118551919-1
ENSG00000234850MTND2P30lossY824028282407511
ENSG00000238073RBMY2HP0lossY75397847544065-1
ENSG00000225740TCEB1P60lossY1994908119949408-1
ENSG00000252012RNA5SP5210lossY19671654196717691
ENSG000002245180lossY17053626170545951
ENSG000002651610lossY1394744313947512-1
ENSG000002702420lossY13551375135527521
ENSG00000259154DUX4L170lossY13470597134718631
ENSG000002269752no signalY1000739710007923-1
ENSG000002351930lossY992563599271951
ENSG00000234950RBMY2OP0lossY978916297970321
ENSG00000229208RBMY2NP0lossY96690279684305-1
ENSG00000217179MTCYBP20lossY21033988210341581
ENSG00000248573PRYP60lossY2095259520952937-1
ENSG00000228193TCEB1P140lossY20949636209499661
ENSG00000172468HSFY10lossY20708557207508491
ENSG00000249726TUBB1P11no signalY20548860205510371
ENSG00000229465ACTG1P110lossY20309770203108941
ENSG000002446460lossY20290496202989131
ENSG00000233120USP9YP150lossY20278413202795811
ENSG00000225895TRAPPC2P80lossY20267200202699881
ENSG00000228240TTTY17A0lossY24997731249988621
ENSG00000224873CDY13P0lossY2466682824667842-1
ENSG00000229553USP9YP170lossY2419590224204260-1
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ENSG00000157828RPS4Y20lossY22918050229429181
ENSG00000228764ZNF885P0lossY22551937225586821
ENSG00000252681RNU1-97P0lossY2588708925887252-1
ENSG00000232424USP9YP290lossY2588640525892840-1
ENSG000002679350lossY25847479258505921
ENSG000002366470lossY25695956256975321
ENSG000002300730lossY25669468256715161
ENSG000002519250lossY2556924625569383-1
ENSG00000205944DAZ20lossY25365594254375031
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ENSG00000242854DNM1P240lossY2632546326329652-1
ENSG000002359810lossY26288505263039901
ENSG00000232205CDY18P0lossY26250254262521651
ENSG000002517960lossY28393531283936681
ENSG00000230854USP9YP200lossY28069535280759731
ENSG00000223655RAB9AP30lossY2806447028065042-1
ENSG00000229343CDY22P0lossY27959160279607131
ENSG00000225326USP9YP190lossY2789474327896353-1
ENSG00000232614USP9YP90lossY2787615827881307-1
ENSG00000172294CSPG4P4Y1no signalY27624416276328521
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ENSG00000216824ZNF736P10Y0lossY82868328287941-1
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ENSG00000239893ZNF736P9Y0lossY79369377938764-1
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ENSG000002326170lossY950283895066191
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ENSG00000225560FAM197Y80lossY91851209193010-1
ENSG00000154620TMSB4Y0lossY15815447158179041
ENSG00000215414PSMA6P10lossY15398518153992581
ENSG00000067048DDX3Y0lossY15016019150323901
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ENSG00000224166PRYP10lossY1984140819856476-1
ENSG00000226353TAF9P10lossY19740393197412821
ENSG00000238191CLUHP10lossY1973313919737712-1
ENSG00000224989FAM41AY10lossY19612838196268981
ENSG00000228518SURF6P10lossY19304706193055321
ENSG00000252323RNU6-184P0lossY1844816318448269-1
ENSG00000252173RNU6-109P0lossY18360815183609211
ENSG00000228787NLGN4Y-AS10lossY1690552216915913-1
ENSG00000129864VCY0lossY1609765216098393-1
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ENSG00000229551GAPDHP170lossY23023223230242231
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ENSG00000227915TCEB1P160lossY25824651258249821
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ENSG00000237563TTTY21B1no signalY631147563151181
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ENSG00000232927USP12PY0lossY355084635519091
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