Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NAMALWA - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.28

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
172768917728111499gain
13594343425953085410gain
13682333666868252110gain
13901012629100586411gain
13914718009400806111gain
1310950141210952342314gain
131095269831108528759gain
1311086021911304638212gain
1399016993998350210gain
510654530310684193712gain
51068449511071867349gain
510807140410841932811gain
31380699291381845989gain
31389914861390667619gain
5942413096688679gain

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000183682BMP8A10gain139957318399916071
ENSG000002500019gain595199659523290-1
ENSG0000025044111gain5108230048108230329-1
ENSG00000226537OR7E33P10gain1368485219684860801
ENSG00000236176LINC0035311gain139020094590206058-1
ENSG00000223617LINC003709gain131099343211099400811
ENSG00000260102LINC0107012gain131128516641128553141
ENSG0000026498912gain13112563079112563148-1
ENSG0000025583112gain131112915551112923401
ENSG00000234854LINC006769gain131103806291103823541
ENSG00000153498SPACA712gain131130306331130890031
ENSG00000229287FABP5P411gain139283296892833138-1
ENSG00000259831LINC0056712gain13111462023111465431-1
ENSG00000134871COL4A212gain131109581591111653741
ENSG00000229938MYO16-AS29gain13109753609109754267-1
ENSG00000182968SOX112gain131127219131127260201
ENSG00000233644ARHGEF7-IT112gain131117749991117966111
ENSG00000225760LINC0043112gain131116356541116429111
ENSG00000227969NPM1P2210gain136840600868406959-1
ENSG00000263741MIR548AS11gain1393142416931424731
ENSG0000020740411gain51082271381082272471
ENSG00000250786SNHG189gain5954631295507211
ENSG000002513709gain5951144595181981
ENSG00000139832RAB2012gain13111175417111214080-1
ENSG00000232814COL4A2-AS112gain13111154922111160526-1
ENSG0000026038512gain131127378631127397851
ENSG00000229152ANKRD10-IT112gain13111547406111551519-1
ENSG00000213995CARKD12gain131112678811112923401
ENSG00000252696RNA5SP3411gain139078796690788095-1
ENSG00000232885GPC5-AS211gain139299204792992856-1
ENSG00000215417MIR17HG11gain1392000074920068331
ENSG00000214178PPIAP2311gain139192433591924831-1
ENSG0000024992111gain51081197991081212531
ENSG00000251732RN7SKP1229gain51071463301071466251
ENSG0000025038311gain5108153742108166491-1
ENSG000002485259gain596214899658570-1
ENSG00000169777TAS2R19gain596291099712490-1
ENSG00000271287BCRP910gain1368364539683649261
ENSG00000235984GPC5-AS111gain139335364293373867-1
ENSG00000224419KRT18P2711gain1390882638908839361
ENSG00000215418PEX12P111gain1390644085906451321
ENSG00000227105PARP1P112gain131115891061115921311
ENSG00000134905CARS212gain13111293759111365950-1
ENSG00000224821COL4A2-AS212gain13111108743111115634-1
ENSG000002558139gain13110407168110407615-1
ENSG00000229520LINC0040412gain13112760409112761196-1
ENSG00000226903LINC0035412gain131125542991125554901
ENSG00000227352ARHGEF7-AS112gain13111796652111797080-1
ENSG00000260343LINC0104312gain131129677811129760721
ENSG000002497819gain596414179903938-1
ENSG00000237624OXCT2P110gain139980628399821621
ENSG00000232849LINC0036311gain1393708910937101791
ENSG00000234625LINC0038011gain139173950891741847-1
ENSG00000153495TEX2912gain131119685311119965961
ENSG00000235875ARHGEF7-AS212gain13111766159111768025-1
ENSG00000255874LINC0034612gain13111521578111522162-1
ENSG00000265885RN7SL783P9gain13110750200110750498-1
ENSG00000224243LINC0040312gain131127614331127623291
ENSG00000176857GJA1P111gain5108387013108388158-1
ENSG00000184349EFNA512gain5106712590107006596-1
ENSG00000239112SNORD1239gain5954894895490171
ENSG00000229792LINC003999gain131100530431100539881
ENSG00000231428LINC003969gain131107056321107072991
ENSG00000201161RN7SKP109gain131105674431105677671
ENSG00000185950IRS29gain13110406184110438915-1
ENSG00000225870LINC0036812gain131117481851117554441
ENSG00000088448ANKRD1012gain13111530887111567416-1
ENSG00000225239RPL21P10712gain13111415021111415480-1
ENSG00000187498COL4A19gain13110801318110959496-1
ENSG0000021588112gain131122483561122944261
ENSG0000020439812gain131122405481123249551
ENSG00000102606ARHGEF712gain131117669061119580841
ENSG00000223626LINC0104412gain13112976881112985539-1
ENSG00000226037LINC0104011gain139012986290152763-1
ENSG00000235879FAR1P111gain1390823120908240531
ENSG00000261446LINC0055911gain139071250690771973-1
ENSG0000020073311gain1390489424904894911
ENSG00000234227RPL7L1P111gain139048541190486195-1
ENSG00000229557LINC0037911gain139177986791783661-1
ENSG00000227983BRK1P211gain139167598691676208-1
ENSG00000207858MIR62211gain1390883436908835311
ENSG00000183098GPC611gain1393879095950596551
ENSG00000236240GPC5-IT111gain1393136859931623471
ENSG00000252508RNU4ATAC3P11gain1392712097927122221
ENSG00000179399GPC511gain1392050929935194901
ENSG00000231667OR7E111P10gain1368476487684773741
ENSG00000158220ESYT39gain31381534281382005281
ENSG00000239708RN7SL782P9gain5107070476107070767-1
ENSG000002488279gain51070606621070628181
ENSG000002499599gain5107035536107052542-1
ENSG00000206593RNU6-47P11gain5108350535108350641-1
ENSG00000153487ING112gain131113650831113734211
ENSG0000023862912gain131110665521110666531
ENSG00000236053LINC010679gain131099624831099641211
ENSG0000020007212gain131127063921127064521
ENSG00000231674LINC0041011gain139154320891578851-1
ENSG0000027139511gain1390203487902046431
ENSG00000236242MYO16-AS19gain13109816250109853831-1
ENSG00000151422FER11gain51080835231085325421