Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NAMALWA - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.28
Chromosome Average Copy Number: 2.95

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
61496622542831loss
62573543825592no signal
638289753048511loss
6530561553056152no signal
6530610457597123no signal
6576257459495934no signal
65954108298371883no signal
629837315315723334no signal
631575276789628903no signal
678969066790267021loss
679026973790392342no signal
679041633935743433no signal
693575867935786310loss
693582923937143943no signal
6937158831342341133no signal
61342355171344760982no signal
61344815461710510063no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000112685EXOC21loss6485133693117-1
ENSG000002719111loss67616757806481
ENSG000002717271loss67115337507291
ENSG00000188996HUS1B1loss6655939656963-1
ENSG000002704771loss636941573694309-1
ENSG00000137266SLC22A231loss632691963457256-1
ENSG000002248461loss629899602999368-1
ENSG000002304381loss628548962881641-1
ENSG000002548211loss6413565741462871
ENSG000002606041loss639051443912213-1
ENSG000002381581loss6383216738559711
ENSG00000239472RN7SL221P4no signal659187935919077-1
ENSG00000265083MIR36911loss651484675148556-1
ENSG00000214113LYRM41loss651028275261172-1
ENSG00000219607PPP1R3G1loss6508572050874551
ENSG000002014833no signal671878157187919-1
ENSG000002233423no signal669012556918948-1
ENSG000002262813no signal666929776711235-1
ENSG000002611893no signal675406847541571-1
ENSG00000124784RIOK13no signal6738972974182701
ENSG000002305703no signal673410877342289-1
ENSG00000124783SSR13no signal672685397347679-1
ENSG00000111843TMEM14C3no signal610723148107313621
ENSG00000111845PAK1IP13no signal610694928107100151
ENSG00000251164HULC3no signal6865237086540791
ENSG00000219294PIP5K1P13no signal6798673079884251
ENSG000002718973no signal611607785116082141
ENSG00000111837MAK3no signal61076295610838764-1
ENSG00000222383RNA5SP2033no signal61075302410753159-1
ENSG00000212802RPL15P33no signal612514342125150061
ENSG00000223321RN7SKP2933no signal61240671812407013-1
ENSG00000078401EDN13no signal612290596122974271
ENSG000002074193no signal611710052117101931
ENSG00000237786GFOD1-AS13no signal613486526134870841
ENSG000002723793no signal61329025013290722-1
ENSG00000145979TBC1D73no signal61326677413328815-1
ENSG00000180537RNF1823no signal613924677139805331
ENSG000002722093no signal613825663138268051
ENSG000002330753no signal613817713138179661
ENSG00000010017RANBP93no signal61362173013711796-1
ENSG00000235488JARID2-AS13no signal61524804615248865-1
ENSG000002342613no signal61497701915090234-1
ENSG000002373463no signal61439146214393519-1
ENSG000002189763no signal61836696718368875-1
ENSG00000165097KDM1B3no signal618155560182240841
ENSG00000184612RPL7P263no signal61753113017531883-1
ENSG000002071933no signal61623246216232561-1
ENSG000002016833no signal620500406205005071
ENSG00000222431RNU6-141P3no signal62045260020452704-1
ENSG00000240869RN7SL128P3no signal62042181220422118-1
ENSG000002271163no signal61973065819734798-1
ENSG00000214975PPIAP293no signal624976647249772101
ENSG00000111913FAM65B3no signal62479760125042238-1
ENSG00000146038DCDC23no signal62417198424358280-1
ENSG00000180573HIST1H2AC3no signal626124373261393441
ENSG00000224447HIST1H1PS23no signal626016607260168291
ENSG000002196813no signal625218916252192971
ENSG00000222373RNY5P53no signal625192641251927181
ENSG00000124578HIST1H4G3no signal62624688626247259-1
ENSG00000197846HIST1H2BF3no signal626199748262009421
ENSG00000197409HIST1H3D3no signal62619706826199521-1
ENSG000002159793no signal62636570426365780-1
ENSG00000186470BTN3A23no signal626365387263785461
ENSG00000220875HIST1H3PS13no signal62632210426322520-1
ENSG00000256018HIST1H3G3no signal62627114626271612-1
ENSG00000219770VN1R11P3no signal627051059270519261
ENSG000002615843no signal626686469266881921
ENSG00000181315ZNF3223no signal62663651826659980-1
ENSG00000198704GPX63no signal62847107328495992-1
ENSG00000198374HIST1H2AL3no signal627833034278336061
ENSG00000197914HIST1H4K3no signal62779895227799305-1
ENSG000002724683no signal62709043627091000-1
ENSG00000224157HCG143no signal628864307288650991
ENSG000002211913no signal628743693287438001
ENSG000002714403no signal62860115828601371-1
ENSG00000204687MAS1L3no signal62945447429455738-1
ENSG00000204701OR2J33no signal629079668290806031
ENSG00000204702OR2J13no signal629068386290696581
ENSG00000204704OR2W13no signal62901199029013017-1
ENSG00000232173OR2H5P3no signal629541686295426131
ENSG00000213886UBD3no signal62952329229527702-1
ENSG00000229281GPR53P3no signal62950548129506564-1
ENSG00000213900RPS17P13no signal62945704829457453-1
ENSG00000204642HLA-F3no signal629690552297063051
ENSG00000204644ZFP573no signal62964016929648887-1
ENSG00000201330SNORD32B3no signal629550026295501091
ENSG00000231130HLA-T4no signal629864431298655631
ENSG00000230521HCG4P74no signal62985507129856045-1
ENSG00000235821IFITM4P3no signal62971850629718925-1
ENSG00000225864HCG4P113no signal62969075829691748-1
ENSG000002529014no signal63005659830056730-1
ENSG00000204622HLA-J4no signal629974360299777331
ENSG00000228078HLA-U4no signal629901878299020631
ENSG00000233677DDX39BP14no signal629874320298746861
ENSG00000137337MDC14no signal63066758430685666-1
ENSG000002357814no signal630484043304869941
ENSG00000224372HLA-N4no signal630319193303193271
ENSG00000237775DDR1-AS14no signal63083475930843695-1
ENSG00000214894LINC002434no signal63076643130798436-1
ENSG00000263608RN7SL353P4no signal630718815307190621
ENSG000002722734no signal630710706307113691
ENSG000002568514no signal631483756314839881
ENSG00000204516MICB4no signal631462658314789011
ENSG00000204525HLA-C4no signal63123652631239907-1
ENSG00000204427ABHD16A3no signal63165472631671221-1
ENSG00000204463BAG63no signal63160680531620482-1
ENSG00000200816SNORA383no signal631590856315909871
ENSG00000204475NCR34no signal63155667231560762-1
ENSG00000204366ZBTB123no signal63186738431869769-1
ENSG00000228727SAPCD13no signal631730576317326281
ENSG00000204420C6orf253no signal631686371316944911
ENSG00000204296C6orf103no signal63225630332339684-1
ENSG00000258388PPT2-EGFL83no signal632121622321397551
ENSG00000224389C4B3no signal631982539320031951
ENSG00000243649CFB3no signal631895475319198611
ENSG00000196735HLA-DQA13no signal632595956326148391
ENSG00000251916RNU1-61P3no signal63251771732517867-1
ENSG00000237285HNRNPA1P23no signal632292996322939551
ENSG00000204257HLA-DMA3no signal63291639032936871-1
ENSG00000242574HLA-DMB3no signal63290240632908847-1
ENSG00000235301HLA-Z3no signal632864193328642671
ENSG00000237541HLA-DQA23no signal632709119327149921
ENSG00000204228HSD17B83no signal633172419331746081
ENSG00000231389HLA-DPA13no signal63303234633048552-1
ENSG00000204252HLA-DOA3no signal63297195532977389-1
ENSG000002637563no signal63293984232940630-1
ENSG000002694903no signal63366319633663474-1
ENSG00000228285LYPLA2P13no signal63333332533334020-1
ENSG00000204227RING13no signal633176272331804991
ENSG00000272325NUDT33no signal63424745634360451-1
ENSG000002217793no signal63403693434036995-1
ENSG00000124493GRM43no signal63398962834123399-1
ENSG00000221697MIR12753no signal63396774933967828-1
ENSG000002642413no signal635101231351013151
ENSG000002216353no signal63443856734438706-1
ENSG00000270800RPS10-NUDT33no signal63425654734393825-1
ENSG00000112081SRSF33no signal636562145365733771
ENSG000002469823no signal63611447536164982-1
ENSG00000137392CLPS3no signal63576275935765088-1
ENSG00000146197SCUBE33no signal635182190352208561
ENSG00000112130RNF83no signal637321748373625141
ENSG000002383753no signal63721898037219082-1
ENSG00000213500LAP3P23no signal636641594366430471
ENSG000002360753no signal64046937040470132-1
ENSG00000204092LINC009513no signal64031208340313890-1
ENSG00000204091TDRG13no signal640302693403476241
ENSG00000112139MDGA13no signal63760028437667082-1
ENSG00000266494MIR46413no signal641566461415665261
ENSG00000096264NCR23no signal641303393413186251
ENSG00000212176RNA5SP2073no signal64120725841207364-1
ENSG00000188056TREML43no signal641196062412066201
ENSG00000124659TBCC3no signal64271221942714558-1
ENSG000002687453no signal641759148417592151
ENSG00000124593PRICKLE43no signal641748087417578791
ENSG00000137171KLC43no signal643008515430428371
ENSG00000044090CUL73no signal64300535543021683-1
ENSG000002311133no signal642908102429160981
ENSG00000221821C6orf2263no signal64285800542858554-1
ENSG00000204052LRRC733no signal64347470743478424-1
ENSG00000171462DLK23no signal64341809043424370-1
ENSG00000112667DNPH13no signal64319336743197222-1
ENSG000002265413no signal646406047464063561
ENSG000002718573no signal64538881645389742-1
ENSG00000265700MIR46473no signal64422194344222022-1
ENSG00000137216TMEM63B3no signal644094651441232561
ENSG00000112818MEP1A3no signal646761127468075151
ENSG00000230062ANKRD663no signal646714654467272431
ENSG000002364663no signal646459789465004951
ENSG00000170927PKHD13no signal65148009851952423-1
ENSG000002169133no signal65086532850865938-1
ENSG000002183373no signal64904534949045688-1
ENSG000002713283no signal647336679473369661
ENSG00000112116IL17F3no signal65210147952109335-1
ENSG00000112115IL17A3no signal652051185520554361
ENSG00000225613MIR133BHG3no signal65201161252015917-1
ENSG00000271373NANOGP33no signal65328325053283535-1
ENSG00000219863RPL31P283no signal653219486532198631
ENSG000002187133no signal65307139653073495-1
ENSG00000253026RNU6-464P3no signal65301859353018696-1
ENSG00000216854RPL17P263no signal656735989567365411
ENSG00000236996MLIP-IT13no signal653863688538719501
ENSG000002493793no signal653367983533717171
ENSG000002666803no signal66428091064282313-1
ENSG000002200303no signal66199640361996816-1
ENSG000002725413no signal65818216958182746-1
ENSG000002702133no signal65802820158028363-1
ENSG000002235043no signal668765243687703941
ENSG000002563523no signal665720260657203361
ENSG00000217811HNRNPDP23no signal66534109865341575-1
ENSG00000219653GCNT1P43no signal664567334645676621
ENSG000002628033no signal671403542714043221
ENSG00000082269FAM135A3no signal671122644712708771
ENSG000002243493no signal67112253171123653-1
ENSG000002187323no signal67302630273027139-1
ENSG000002237653no signal672160537721685771
ENSG00000112309B3GAT23no signal67156638271666741-1
ENSG000002177673no signal671444206714446651
ENSG00000234882EIF3EP13no signal674001685740030001
ENSG000002298523no signal673972938740111241
ENSG00000266180MIR42823no signal67367741073677476-1
ENSG000002316523no signal67440362674405854-1
ENSG000002719863no signal67419731574197600-1
ENSG00000231332OOEP-AS13no signal674079427740974401
ENSG00000203908KHDC3L3no signal674072400740738941
ENSG00000135312HTR1B3no signal67817194878173490-1
ENSG00000112706IMPG13no signal67663083276782395-1
ENSG000002381563no signal676164660761686161
ENSG00000218748DBIP13no signal68014662580146884-1
ENSG000002315333no signal680130014801310221
ENSG000002620483no signal68011595780116491-1
ENSG00000146243IRAK1BP13no signal679577189796561571
ENSG000002249953no signal68252300382523874-1
ENSG000002353573no signal68051330080516942-1
ENSG00000135338LCA53no signal68019470880247175-1
ENSG00000214460TPT1P63no signal68613717186137684-1
ENSG000002341553no signal68609693786099904-1
ENSG000002317763no signal68513074685265870-1
ENSG000002308523no signal684732774847342721
ENSG00000198738SMIM11P13no signal68644546286445639-1
ENSG000002173343no signal686441089864417291
ENSG00000220563PKMP33no signal68636961086370324-1
ENSG000002360163no signal686340080863409951
ENSG00000203872C6orf1633no signal688054567880751811
ENSG000002183133no signal68788308687884021-1
ENSG00000222686RNU4-72P3no signal686461299864614711
ENSG00000118432CNR13no signal68884958388876078-1
ENSG000002119833no signal68855726388557350-1
ENSG000002071313no signal68853589188536003-1
ENSG00000213204C6orf1653no signal688117730882213521
ENSG00000112182BACH23no signal69063624891006627-1
ENSG00000239316RN7SL11P3no signal690187860901881501
ENSG00000218965NACAP73no signal69013181890132767-1
ENSG00000014123UFL13no signal696969471970031521
ENSG000002704843no signal69515174895153527-1
ENSG00000213187COPS5P13no signal69380169493802478-1
ENSG000002203403no signal69243700092437223-1
ENSG00000146263MMS22L3no signal69759003797731093-1
ENSG000002173313no signal69712000597120845-1
ENSG00000112214FHL53no signal697010424970645121
ENSG000001993033no signal6100090113100090223-1
ENSG000002720173no signal61000159731000169721
ENSG00000112234FBXL43no signal69931642099395849-1
ENSG000002424863no signal698155635981805881
ENSG000002529183no signal6105644728105644811-1
ENSG000002022833no signal61040310101040311431
ENSG00000164418GRIK23no signal61018466641025179581
ENSG000002206953no signal61009781521009789281
ENSG000002003143no signal61069027031069028041
ENSG000002074993no signal61068685811068686821
ENSG000002721023no signal6105721095105721635-1
ENSG00000203801LINC002223no signal61090728571090911451
ENSG00000135537LACE13no signal61086160981088479991
ENSG00000112333NR2E13no signal61084872621085100131
ENSG000002032813no signal6107584371107584617-1
ENSG000002195593no signal6110883378110883818-1
ENSG000002288343no signal6109228818109229076-1
ENSG000002188723no signal6109177603109177940-1
ENSG00000112761WISP33no signal61123752751123921711
ENSG00000207431RNU6-906P3no signal6111329473111329579-1
ENSG000002716073no signal61111850631111856541
ENSG000002170413no signal61110217651110221031
ENSG000002182083no signal61139027031139031491
ENSG000002323163no signal6113749742113754623-1
ENSG00000216904SOCS5P53no signal61135433681135452741
ENSG00000173612GPRC6A3no signal6117113248117150200-1
ENSG00000173626TRAPPC3L3no signal6116816152116866773-1
ENSG00000178425NT5DC13no signal61164220121165706601
ENSG000001759673no signal61142253021142428061
ENSG00000207461RNU6-253P3no signal6117778897117779001-1
ENSG00000047932GOPC3no signal6117639374117923691-1
ENSG00000217089RPS29P133no signal6117369833117370001-1
ENSG00000201379RNU4-76P3no signal6121863632121863772-1
ENSG000002197843no signal6121799419121801054-1
ENSG00000207982MIR548B3no signal6119390212119390308-1
ENSG000002531943no signal61192559501193527061
ENSG000002602123no signal61279805691279814831
ENSG00000220548VIMP13no signal6126923502126924795-1
ENSG00000111906HDDC23no signal6125541108125623282-1
ENSG000002203263no signal6121962155121962367-1
ENSG000002022003no signal6129082862129082953-1
ENSG00000152894PTPRK3no signal6128289924128841870-1
ENSG000002196993no signal6127980835127981724-1
ENSG00000252560RNU4-18P3no signal6131963958131964106-1
ENSG00000112282MED233no signal6131895106131949369-1
ENSG00000219776RPL21P673no signal61317901991317906761
ENSG00000146376ARHGAP183no signal6129897277130031370-1
ENSG00000118523CTGF3no signal6132269316132272513-1
ENSG00000200895RN7SKP2453no signal61321414741321417931
ENSG000002195323no signal6132140943132141231-1
ENSG00000179073TAAR33no signal6132929364132930441-1
ENSG00000223912EEF1A1P363no signal61325931211325944711
ENSG00000265669MIR548AJ13no signal6132436332132436403-1
ENSG000002361663no signal61324062241324204191
ENSG000002386313no signal6134527549134527652-1
ENSG000002235423no signal6133756215133760602-1
ENSG00000112299VNN13no signal6133002729133035188-1
ENSG00000213111COX5BP23no signal6136355169136356293-1
ENSG000002363783no signal6136128286136129604-1
ENSG00000112339HBS1L3no signal6135281516135424194-1
ENSG00000218772FAM8A6P3no signal6134924702134925836-1
ENSG000002213363no signal6140981760140981850-1
ENSG000002353993no signal61373163071373206411
ENSG000002342633no signal61369503101369691371
ENSG000002244603no signal6143267184143277835-1
ENSG00000010818HIVEP23no signal6143072604143266338-1
ENSG000002709833no signal61423838541423841901
ENSG000002341473no signal6141167095141174061-1
ENSG000002194093no signal61447190951447198881
ENSG00000152818UTRN3no signal61446068371451741701
ENSG00000189007ADAT23no signal6143743969143771810-1
ENSG000002326183no signal61432713481432777831
ENSG00000112425EPM2A3no signal6145822719146057160-1
ENSG000002176123no signal6145810766145813228-1
ENSG000002207393no signal6145029242145029633-1
ENSG00000111962UST3no signal61490684641493981261
ENSG000002251353no signal61477088001477116011
ENSG000002723973no signal6147269664147272295-1
ENSG000002708283no signal6146058047146058309-1
ENSG00000055211GINM13no signal61498874301499128841
ENSG00000131013PPIL43no signal6149825869149867174-1
ENSG000002284083no signal61495390621495652081
ENSG000002207453no signal6153280494153280740-1
ENSG00000131018SYNE13no signal6152442819152958936-1
ENSG00000009765IYD3no signal61506900281507271051
ENSG000002685923no signal61501837331502406431
ENSG00000078269SYNJ23no signal61584028881585202081
ENSG000002130783no signal6157787022157787955-1
ENSG000002207333no signal61539893121539894971
ENSG00000233893EZR-AS13no signal61592390431592416251
ENSG00000219188CACYBPP33no signal6158936637158937261-1
ENSG000002658033no signal61585960161585961021
ENSG00000272047GTF2H53no signal61585893841586203761
ENSG000002130763no signal6159342303159343182-1
ENSG00000203711C6orf993no signal61592909711593313851
ENSG00000243775OSTCP13no signal6159262149159278664-1
ENSG00000256391SDIM13no signal6166307330166309725-1
ENSG000002209133no signal61613268021613346701
ENSG00000146477SLC22A33no signal61607693001608760141
ENSG00000112096SOD23no signal6160090089160183561-1
ENSG00000071994PDCD23no signal6170884383170893780-1
ENSG000002610393no signal6169575401169582835-1
ENSG000002286483no signal61676553791676594041
ENSG000001971463no signal6167357853167360151-1
ENSG00000217684RPS3AP243no signal61410826661410833991
ENSG00000118495PLAGL13no signal6144261437144385735-1
ENSG000002708903no signal6144179199144179826-1
ENSG00000112419PHACTR23no signal61438579821441523221
ENSG000002176483no signal61436633831436645201
ENSG000001966343no signal61474800611475021281
ENSG000002168113no signal6146686067146686630-1
ENSG000002253113no signal6144632835144654437-1
ENSG00000219297MRPL42P33no signal61444575871444579121
ENSG00000215223CYP51A1P33no signal61487998291488018991
ENSG000002246583no signal6148558721148604544-1
ENSG000002262493no signal6148062570148064460-1
ENSG00000131023LATS13no signal6149979289150039392-1
ENSG000002333303no signal6149912891149913799-1
ENSG00000177688SUMO43no signal61497214951497221771
ENSG000002259243no signal6149564435149565137-1
ENSG000002265993no signal6150971908150973161-1
ENSG00000155918RAET1L3no signal6150339470150346668-1
ENSG000002150943no signal61502729691502733751
ENSG00000131016AKAP123no signal61515611341516796921
ENSG000002235983no signal6151409239151549582-1
ENSG00000202119RNU6-302P3no signal61512603581512604641
ENSG000002189963no signal61512561041512567021
ENSG000002338233no signal6152134411152135314-1
ENSG00000207422RNU6-813P3no signal6151936908151937014-1
ENSG00000146476C6orf2113no signal61517734221517912361
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