Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NAMALWA - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.28
Chromosome Average Copy Number: 3.36

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
580979992866442272no signal
586646146867220461loss
586724738879346212no signal
5879363791028566332no signal
51028599031035261536no signal
51035264381035946598no signal
51035963081065434312no signal
510654530310684193712gain
51068449511071867349gain
51071920551080703752no signal
510807140410841932811gain
51084329701098324835no signal
51098411341101549143no signal
51101571111102608505no signal
51102626431124864103no signal
51124880021125801444no signal
51125802901202975203no signal
51203007511204261325no signal
51204302371626002893no signal
51626007501626545065no signal
51626574041807903213no signal
5155331071084no signal
511271294222356no signal
5942413096688679gain
59672417122160628no signal
512225868535287304no signal
553529711539515125no signal
553951585615061242no signal
561513909615315484no signal
561531893617939325no signal
561795538710101483no signal
571010567720101393no signal
572010301809775443no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000164366CCDC1276no signal5196986218330-1
ENSG00000153404PLEKHG4B6no signal51403731900851
ENSG000002494304no signal5922661399781
ENSG000002499086no signal5767512769046-1
ENSG000002142786no signal5403846404661-1
ENSG000002508486no signal5288948290436-1
ENSG000002485976no signal519637231967268-1
ENSG000002504176no signal518560841856682-1
ENSG000002723476no signal5100515410067381
ENSG00000247872SPCS2P36no signal58164618171161
ENSG000002505296no signal550693055078424-1
ENSG00000215231LINC010206no signal5503447250701171
ENSG000002010266no signal5218482421849341
ENSG000002059766no signal572998877306705-1
ENSG000002725206no signal5667121966744991
ENSG00000133398MED106no signal563719946378707-1
ENSG000002508086no signal553960855396448-1
ENSG00000124279FASTKD36no signal578592727869150-1
ENSG000002507616no signal577079157749879-1
ENSG00000078295ADCY26no signal5739632178301941
ENSG000002500019gain595199659523290-1
ENSG000002501986no signal5883984488816371
ENSG000002497826no signal5852529185287911
ENSG000002494866no signal581576548157901-1
ENSG000002526718no signal510337389103374981
ENSG000002717158no signal51026960110270030-1
ENSG00000150756FAM173B8no signal51022644210250009-1
ENSG000002724178no signal51020371210204152-1
ENSG000002141798no signal510541568105418071
ENSG00000145495MARCH68no signal510353815104405001
ENSG000002598028no signal51035281310353713-1
ENSG00000183654MARCH114no signal51606724816180871-1
ENSG00000250247SEPHS2P14no signal514960341149615021
ENSG000002514234no signal513860447138978801
ENSG000002649214no signal512599735125998121
ENSG00000252908RNU6-1003P4no signal517240720172408241
ENSG000002718924no signal51710746917107898-1
ENSG00000248403NACAP64no signal51619219716192818-1
ENSG000002496204no signal51751194217512347-1
ENSG000002482054no signal51750215217502472-1
ENSG000002496624no signal517444119174840551
ENSG000001852964no signal517306490173070691
ENSG000002122784no signal518236232182363051
ENSG000002483374no signal51765448217654752-1
ENSG000002500554no signal517525344175259381
ENSG000002485914no signal523456577234569591
ENSG000002492894no signal52332953623330001-1
ENSG00000213430HSPD1P14no signal521882694218844211
ENSG00000249191UBE2V1P124no signal51888673118887204-1
ENSG000002486054no signal52540484225446034-1
ENSG000002506944no signal52435241824353552-1
ENSG000002264324no signal524170479241713551
ENSG000002388644no signal531824686318247891
ENSG000002496884no signal531754326317547631
ENSG000002483914no signal52938040329396088-1
ENSG000002264004no signal528927136289273911
ENSG000002229614no signal53237951332379573-1
ENSG00000207052RNU6-378P4no signal532309768323098741
ENSG000002308294no signal532222038322224531
ENSG00000242110AMACR4no signal53398628334008220-1
ENSG000002514434no signal533229841332556591
ENSG000002506724no signal53309023233090455-1
ENSG000002491024no signal533009100330258301
ENSG000002502344no signal53465651734657355-1
ENSG00000039560RAI144no signal534656342348327321
ENSG000002151564no signal534190161341937581
ENSG000002483494no signal53589629035896392-1
ENSG00000168724DNAJC214no signal534929698349590691
ENSG00000241829RPL21P544no signal534883162348836251
ENSG00000205838TTC23L4no signal534838938348995611
ENSG000002485394no signal53789946537920971-1
ENSG00000248587GDNF-AS14no signal537840540378759011
ENSG00000222743RNU6-1190P4no signal53762008737620190-1
ENSG000002515914no signal53607189336072181-1
ENSG00000251515CCDC11P14no signal53957158039572741-1
ENSG000002692154no signal539105358391073501
ENSG000002497404no signal53873615738845931-1
ENSG000002705134no signal542729240427296211
ENSG000002607864no signal542188368421916251
ENSG00000151876FBXO44no signal541925356419418451
ENSG00000083720OXCT14no signal54173016741870621-1
ENSG000002504184no signal54469853344700910-1
ENSG000002150684no signal543041677430454921
ENSG00000250722SEPP14no signal54279998242887494-1
ENSG00000249069LINC010335no signal553616774537109551
ENSG00000249270KATNBL1P44no signal551226642512278701
ENSG00000249338HMGB1P474no signal55070545150706039-1
ENSG00000263556RN7SL383P4no signal544716292447165871
ENSG000002656652no signal55575286555752965-1
ENSG00000248781PSMC1P42no signal55557113155572457-1
ENSG000002405352no signal55431712754338672-1
ENSG000002482942no signal556869854569101681
ENSG00000062194GPBP12no signal556469775565605061
ENSG000002072932no signal55646493556465036-1
ENSG000002487272no signal55575362255777773-1
ENSG00000202601MIR5822no signal55899943258999529-1
ENSG000002481322no signal55740390957418168-1
ENSG000002494362no signal556910216569132581
ENSG00000178722C5orf642no signal560933535610475901
ENSG00000213891RPL3P62no signal56068649560687698-1
ENSG00000035499DEPDC1B2no signal55989273959996017-1
ENSG00000152931PART12no signal559783540598434841
ENSG000002723703no signal564315865643163781
ENSG00000153015CWC273no signal564064757643145901
ENSG00000186479RGS7BP3no signal563802084639081391
ENSG00000186105LRRC703no signal561874562618772751
ENSG000002516483no signal565028800650294811
ENSG000002532513no signal564920592649267181
ENSG00000250732RPEP13no signal56454695464547611-1
ENSG00000250289VWA8P13no signal56815073768150912-1
ENSG000002537873no signal567485704674942351
ENSG000002513913no signal565594296656187721
ENSG00000153914SREK13no signal565435799654794431
ENSG00000145740SLC30A53no signal568389473684268961
ENSG000002493523no signal56826626668325992-1
ENSG000002122493no signal568169781681699141
ENSG000002492953no signal56877329968798293-1
ENSG00000244717RPS27P143no signal568765710687659631
ENSG000002710453no signal568645763686462721
ENSG00000134057CCNB13no signal568462837684740721
ENSG000001799783no signal56939020269424261-1
ENSG00000205572SERF1B3no signal569321074693389401
ENSG000002501383no signal568927790689323121
ENSG00000215630GUSBP93no signal57043571670585611-1
ENSG000002516343no signal57039872570424580-1
ENSG00000172062SMN13no signal570220768702497691
ENSG000002055653no signal569803906698084221
ENSG00000164326CARTPT3no signal571014990710168751
ENSG000002656133no signal57091081170910911-1
ENSG00000247911HMGN1P123no signal57083347970833673-1
ENSG000002387383no signal57244993872450011-1
ENSG00000263593MIR48043no signal572174418721744901
ENSG000002067703no signal572064529720646381
ENSG00000049883PTCD23no signal571616194716560521
ENSG000002421983no signal574670288746706341
ENSG000002473723no signal57461598074632739-1
ENSG000002123633no signal57417848174178608-1
ENSG00000171617ENC13no signal57392323473937249-1
ENSG000002511073no signal575576781755770921
ENSG000002516683no signal575466755754669281
ENSG00000152359POC53no signal57496994975013313-1
ENSG00000251400ALDH7A1P13no signal576586093765876251
ENSG00000145708CRHBP3no signal576248538762769831
ENSG00000264391RN7SL208P3no signal57613272776133020-1
ENSG000002386883no signal576079921760800241
ENSG00000201955RNY3P13no signal57846605778466158-1
ENSG00000145685LHFPL23no signal57778103878065844-1
ENSG00000200331RNU6-183P3no signal57761074077610849-1
ENSG00000265684RN7SL378P2no signal581374246813745411
ENSG00000228716DHFR3no signal57992204779950802-1
ENSG00000249778TRMT112P23no signal57932899479329125-1
ENSG000002073913no signal578830676788307771
ENSG00000152422XRCC42no signal582373317826496061
ENSG00000240411RPL5P162no signal582073616820744051
ENSG000002488702no signal58188259581883230-1
ENSG000002148532no signal58429573884296113-1
ENSG00000252861RNU6-448P2no signal583492701834928071
ENSG000002500132no signal58317098583171640-1
ENSG000002433852no signal582497048824979601
ENSG00000250359PTP4A1P42no signal585383344853836651
ENSG000002510662no signal584845227848457701
ENSG000002502532no signal58450587884506721-1
ENSG000002505552no signal587988468879886761
ENSG00000164180TMEM161B2no signal58748545087565293-1
ENSG000002493622no signal586957859869749641
ENSG00000241243RN7SL629P2no signal58659000886590290-1
ENSG000002114982no signal593914474939145551
ENSG00000249353NPM1P272no signal59301854493019373-1
ENSG00000213730POLD2P12no signal592603135926041311
ENSG000002129302no signal590519236905197841
ENSG00000173221GLRX2no signal59508702395158709-1
ENSG00000178015GPR1502no signal594955782949578461
ENSG00000175471MCTP12no signal59403944694620279-1
ENSG000002721092no signal596140056961418081
ENSG00000206997RNU6-524P2no signal59554582595545931-1
ENSG00000213716FABP5P52no signal59530874595309150-1
ENSG000002510002no signal59517012895170750-1
ENSG000002503912no signal59928399999285287-1
ENSG000002494442no signal598825263988350711
ENSG000002487582no signal59652379496537584-1
ENSG00000222987RN7SKP682no signal51016382081016385141
ENSG00000174132FAM174A2no signal599871009999224451
ENSG000002497872no signal599737145997446031
ENSG00000249963EEF1A1P202no signal599332251993336361
ENSG000002535842no signal5104253193104582065-1
ENSG000002537762no signal51041093421041354731
ENSG00000250958LINC004922no signal51019170721019532931
ENSG000002490685no signal5109175829109176393-1
ENSG000002660905no signal51090212811090213931
ENSG0000025044111gain5108230048108230329-1
ENSG000002510272no signal5106150898106346715-1
ENSG000002510143no signal51118826701118832021
ENSG00000248430HMGB3P163no signal5111788400111788686-1
ENSG000002147843no signal5110527924110528740-1
ENSG00000249582RPL7L1P43no signal5117114521117115227-1
ENSG000002722653no signal5115413807115414267-1
ENSG000001729013no signal51152981511153633161
ENSG00000153037SRP193no signal51121969191122054851
ENSG00000243333RN7SL174P3no signal5118642039118642326-1
ENSG00000248979LAMTOR3P23no signal5118468346118468577-1
ENSG000002488853no signal5118462477118464139-1
ENSG00000172869DMXL13no signal51183734671185848331
ENSG00000181867FTMT3no signal51211876501211885191
ENSG000002342593no signal51190158921190167751
ENSG000002136633no signal5118882826118883301-1
ENSG00000061455PRDM63no signal51224248161225299601
ENSG000002499163no signal5121705457121719263-1
ENSG000002721393no signal5121646992121647368-1
ENSG000002496103no signal5121490191121491710-1
ENSG000002482963no signal5123828468123872041-1
ENSG00000253807LINC011703no signal5123641923123740772-1
ENSG00000249400HMGB3P173no signal5122804475122805123-1
ENSG00000252185RNU6-752P3no signal5126091008126091109-1
ENSG000002499043no signal5125221978125222446-1
ENSG000002502693no signal5124718552124719148-1
ENSG00000222107RN7SKP1173no signal5124686561124686824-1
ENSG000002506033no signal5127174178127193496-1
ENSG000002509563no signal5126515448126515592-1
ENSG00000113368LMNB13no signal51261123151261727121
ENSG000002025333no signal51318038391318039491
ENSG00000186687LYRM73no signal51305065031305411191
ENSG000002486343no signal51279996711280785221
ENSG000002459373no signal5127276118127418864-1
ENSG00000131437KIF3A3no signal5132028320132073330-1
ENSG00000113522RAD503no signal51318917111319803131
ENSG000002342903no signal5131804582131808735-1
ENSG00000221287MIR1289-23no signal5132763288132763398-1
ENSG000002720233no signal51322994621322998561
ENSG000002024173no signal51322810341322811461
ENSG00000164404GDF93no signal5132196873132202576-1
ENSG000002501673no signal51348952671349705641
ENSG00000198868MIR44613no signal5134263720134264016-1
ENSG000002509943no signal51337724021338282101
ENSG00000113558SKP13no signal5133484633133512729-1
ENSG00000164621SMAD5-AS13no signal5135465196135470579-1
ENSG000002503783no signal51351483561351622711
ENSG000002640393no signal5135140194135140282-1
ENSG000002664753no signal5137316150137316247-1
ENSG00000120729MYOT3no signal51372034801372235401
ENSG000002502843no signal51360706161360903751
ENSG000002498033no signal51358023661358559871
ENSG00000112983BRD83no signal5137475455137514675-1
ENSG00000199880RNU6-888P3no signal5137458700137458800-1
ENSG00000061492WNT8A3no signal51374195811374280541
ENSG000002426833no signal5138370837138371676-1
ENSG000002387453no signal51379591681379592711
ENSG000002321293no signal51378878501378880501
ENSG00000120733KDM3B3no signal51376882851377727171
ENSG000002496893no signal51388721231388726901
ENSG000002690713no signal51388521081388525061
ENSG00000170469SPATA243no signal5138732252138739777-1
ENSG00000222790RNU4-14P3no signal5139776908139777029-1
ENSG00000120306CYSTM13no signal51395542271396616371
ENSG00000146005PSD23no signal51391754061392240511
ENSG000002070203no signal5138934485138934586-1
ENSG00000171815PCDHB13no signal51404309791404335121
ENSG00000204965PCDHA53no signal51402012221403919291
ENSG00000112855HARS23no signal51400710111400788891
ENSG00000254221PCDHGB13no signal51407298281408925461
ENSG00000196963PCDHB163no signal51405609801405657931
ENSG00000113211PCDHB63no signal51405296831405328681
ENSG00000113209PCDHB53no signal51405148001405177031
ENSG00000113580NR3C13no signal5142657496142815077-1
ENSG000002367143no signal51421251651421405631
ENSG00000113552GNPDA13no signal5141371314141392606-1
ENSG00000197948FCHSD13no signal5141018869141030986-1
ENSG000002134883no signal51439017031439025511
ENSG000002498813no signal51429851931432083371
ENSG000002494293no signal5142869420142910915-1
ENSG000002500253no signal5145686661145756526-1
ENSG00000091009RBM273no signal51455831131457188141
ENSG000002393173no signal51455183341455185711
ENSG00000204928GRXCR23no signal5145239296145252531-1
ENSG000002681263no signal51476985501477018911
ENSG00000249553PPP2R2B-IT13no signal5146293770146299069-1
ENSG000002717243no signal5145755154145755782-1
ENSG00000155850SLC26A23no signal51493403001493730181
ENSG000002515833no signal5149311577149312231-1
ENSG00000253618GRPEL2-AS13no signal5148727679148737205-1
ENSG00000157510AFAP1L13no signal51486514341487213651
ENSG00000019582CD743no signal5149781200149792492-1
ENSG00000182578CSF1R3no signal5149432854149492935-1
ENSG000002383693no signal5149408912149409015-1
ENSG00000197043ANXA63no signal5150480273150537443-1
ENSG00000211445GPX33no signal51504001241504085541
ENSG00000197083ZNF300P13no signal5150310207150325851-1
ENSG000002503093no signal5150050220150051952-1
ENSG000002420803no signal5151875279151875578-1
ENSG000002721123no signal5151104392151104917-1
ENSG000002534723no signal5150757564150758201-1
ENSG000002514053no signal5156789623156887086-1
ENSG00000135077HAVCR23no signal5156512843156569880-1
ENSG000002714773no signal51547768511547779131
ENSG00000155506LARP13no signal51540924621541971671
ENSG00000206819RNU6-260P3no signal51572361061572362121
ENSG000002537983no signal5157109993157117274-1
ENSG000002535193no signal51569929721569961061
ENSG000002534243no signal51576831451576854441
ENSG000002534493no signal5157652360157661384-1
ENSG000002534223no signal5157505107157505772-1
ENSG00000222626RNU2-48P3no signal5157403774157403964-1
ENSG000002537723no signal51596745241596752241
ENSG00000170231FABP63no signal51596143741596657421
ENSG000002664323no signal51589529461589530181
ENSG000002541353no signal51579121981579614461
ENSG00000249449MRP63P63no signal51624662971624666051
ENSG000002500613no signal5162439271162864332-1
ENSG00000022355GABRA13no signal51612741971613269751
ENSG00000254252RPL7P203no signal5165455572165456316-1
ENSG000002540663no signal5164647583164668758-1
ENSG000002240123no signal5163136216163136520-1
ENSG00000038274MAT2B3no signal51629301201629463421
ENSG00000182132KCNIP13no signal51697804911701636361
ENSG00000168269FOXI13no signal51695329011695367271
ENSG000002532693no signal5169199970169206369-1
ENSG00000212402SNORA74B3no signal51724477311724479311
ENSG000002534453no signal5172117457172124723-1
ENSG00000265160MIR50033no signal51720891681720892661
ENSG00000174705SH3PXD2B3no signal5171752185171881527-1
ENSG00000185056C5orf473no signal51734007821734331431
ENSG000002539553no signal51730066461730120711
ENSG000002072103no signal5172479455172479558-1
ENSG000002482933no signal51743535441743537201
ENSG000002511443no signal51742470301742533271
ENSG00000248929HIGD1AP33no signal51740599351740602121
ENSG000001700913no signal51734726071736705041
ENSG00000122203KIAA11913no signal5175773064175788971-1
ENSG00000170085SIMC13no signal51756653651757729941
ENSG00000248355ARL2BPP63no signal51747177341747182551
ENSG000001700893no signal51772364081773777331
ENSG00000169223LMAN23no signal5176758563176778853-1
ENSG00000074276CDHR23no signal51759695121760229751
ENSG00000146066HIGD2A3no signal51758157481758167721
ENSG00000249140PRDX2P33no signal51789991571789997421
ENSG000002539793no signal51788045061788058661
ENSG00000177932ZNF354C3no signal51784874161785105381
ENSG00000204677FAM153C3no signal51774334061774825601
ENSG00000204661C5orf603no signal5179068545179072047-1
ENSG00000169045HNRNPH13no signal5179041179179061785-1
ENSG000002449453no signal5179022905179030742-1
ENSG00000206686RNU6-1036P3no signal51804342811804343841
ENSG000002513523no signal5180098892180099598-1
ENSG00000050748MAPK93no signal5179660143179719099-1
ENSG000002282593no signal51790782981790794451
ENSG00000248275TRIM52-AS13no signal51806882131806993081
ENSG000002502223no signal51806189241806214291
ENSG00000131183SLC34A13no signal51768062361768258491
ENSG00000169220RGS143no signal51767848381767996021
ENSG000002488593no signal51761702061761708721
ENSG000002213733no signal51758787631758788731
ENSG00000221394MIR12293no signal5179225278179225346-1
ENSG00000161021MAML13no signal51791598511792235121
ENSG00000204659CBY33no signal5179105584179107975-1
ENSG000002509993no signal51790847631790914331
ENSG00000264205RN7SL71P3no signal5178893834178894126-1
ENSG000002133283no signal5178336711178337610-1
ENSG00000113240CLK43no signal5178029665178057616-1
ENSG000002492873no signal5180394189180397762-1
ENSG000002637593no signal51800094451800095301
ENSG000002297213no signal5179653378179654000-1
ENSG000002534803no signal5179512717179514038-1
ENSG00000198995MIR3403no signal5179442303179442397-1
ENSG000002494123no signal51793906151793914191
ENSG00000183718TRIM523no signal5180681417180688119-1
ENSG00000264732MIR46383no signal5180649566180649633-1
ENSG000002485143no signal5180632361180633120-1
ENSG00000146054TRIM73no signal5180620924180632293-1
ENSG000002312283no signal51804092431804096111
ENSG00000156475PPP2R2B3no signal5145967936146464347-1
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