Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

NAMALWA - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.28
Chromosome Average Copy Number: 2.96

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
31626265731978961193no signal
330067731300714450loss
3935194791380659223no signal
31380699291381845989gain
31381848851389870123no signal
31389914861390667619gain
31390684651625081793no signal
31625081931626259965no signal
360972678611160091loss
361116605637185402no signal
363727188637688700loss
363777741905028632no signal
360346300632384no signal
330074874412740724no signal
341279026604929272no signal
360493443605276111loss
360527951609708092no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG000002235874no signal365431661751
ENSG000002651694no signal3874169787417841
ENSG000002662934no signal380481648048248-1
ENSG000002260224no signal3619017164075721
ENSG00000265180MIR47904no signal352918625291940-1
ENSG00000144550CPNE94no signal3974549197715921
ENSG000002699754no signal395400459541253-1
ENSG000002660014no signal394679419468034-1
ENSG000001998154no signal3897317989733161
ENSG000002699824no signal310000401100042231
ENSG00000163701IL17RE4no signal3994429699580861
ENSG00000241553ARPC44no signal3983417998494101
ENSG00000196639HRH14no signal311178779113052431
ENSG000002391674no signal310523647105237091
ENSG000002065674no signal31004810210052893-1
ENSG00000232901CYCSP104no signal31004233110042624-1
ENSG000002327464no signal31291902112926710-1
ENSG00000231897MARK2P144no signal311948001119537871
ENSG00000230342FANCD2P24no signal311901148119326461
ENSG00000154764WNT7A4no signal31385775513921618-1
ENSG000002654574no signal31375941713759507-1
ENSG00000163517HDAC114no signal313521224135479161
ENSG00000144711IQSEC14no signal31293871913114617-1
ENSG00000177463NR2C24no signal314989091150951071
ENSG00000170860LSM34no signal314219858142426191
ENSG00000250439FGD5P14no signal313974553139789771
ENSG00000207815MIR5634no signal315915278159153561
ENSG00000131373HACL14no signal31560221115643338-1
ENSG00000226427HMGN2P74no signal31541688015417152-1
ENSG000002520854no signal31527850715278600-1
ENSG000002719644no signal316355946163564941
ENSG00000131378RFTN14no signal31635508116555533-1
ENSG000002707394no signal31631656716318139-1
ENSG000002317804no signal317374618173749231
ENSG00000092345DAZL4no signal31662829916711813-1
ENSG000002693914no signal316572278165733091
ENSG000002725294no signal316386633163879471
ENSG00000237485SGOL1-AS14no signal320215736202279191
ENSG00000163576EFHB4no signal31992096419988517-1
ENSG000002724774no signal31845017218451127-1
ENSG000002262384no signal318031515180370361
ENSG00000233153UBE2E2-AS14no signal32323656123244069-1
ENSG00000225542ZNF385D-AS14no signal321584308216214511
ENSG00000236380VENTXP74no signal321447218214481751
ENSG00000207251RNU6-342P4no signal32730707127307174-1
ENSG000002253864no signal32666082126664181-1
ENSG00000197885NKIRAS14no signal32393315123988082-1
ENSG000002215064no signal32344099123441060-1
ENSG00000163527STT3B4no signal331574130316791121
ENSG000002387274no signal331437429314375231
ENSG00000215004MESTP44no signal329128887291300901
ENSG00000182973CNOT104no signal332726637328153671
ENSG000002269554no signal33263446432634804-1
ENSG000002367324no signal33219257532193387-1
ENSG000002017014no signal332079018320791451
ENSG000002718354no signal33702653437026975-1
ENSG00000212442RNU6-243P4no signal33529833235298438-1
ENSG00000206557TRIM714no signal332859510329393181
ENSG00000144677CTDSPL4no signal337903451380259601
ENSG00000199594RNU6-1301P4no signal337181818371819211
ENSG00000093167LRRFIP24no signal33709411737225180-1
ENSG000002721274no signal33702735737028273-1
ENSG00000093217XYLB4no signal338388251384628391
ENSG00000199514RNU6-235P4no signal33834526438345370-1
ENSG00000060971ACAA14no signal33814462038178733-1
ENSG000002703674no signal339327476393294111
ENSG00000206708RNU6-1227P4no signal339067478390675841
ENSG000002159414no signal338948805389488801
ENSG000002312434no signal338865393388667931
ENSG00000201570RNU4-56P4no signal340011616400117571
ENSG00000230757NFU1P14no signal339685129396861961
ENSG00000202363SNORA624no signal339452545394526971
ENSG00000223668EEF1A1P244no signal339400036394014131
ENSG000002121452no signal34194060341940745-1
ENSG00000168036CTNNB14no signal341236328413015871
ENSG00000265327RN7SL411P4no signal340250496402507931
ENSG00000181061HIGD1A2no signal34279866942846023-1
ENSG00000157119KLHL402no signal342727011427340361
ENSG00000232354VIPR1-AS12no signal34254801642574750-1
ENSG00000114812VIPR12no signal342530791425790591
ENSG000002323752no signal343078613430789431
ENSG00000144649FAM198A2no signal343020759431017031
ENSG00000180432CYP8B12no signal34289749742917633-1
ENSG00000144792ZNF6602no signal344619715446411861
ENSG00000196345ZKSCAN72no signal344596685446249751
ENSG000002358862no signal34382045343821474-1
ENSG00000241939RN7SL517P2no signal343356443433567451
ENSG00000163815CLEC3B2no signal345043040450775631
ENSG00000169964TMEM422no signal344903361449071621
ENSG00000169981ZNF352no signal344690219447022831
ENSG00000211456SACM1L2no signal345730548457869161
ENSG000001785502no signal34526661745267519-1
ENSG00000163814CDCP12no signal34512377045187914-1
ENSG00000252410RNU5B-3P2no signal34507596645076080-1
ENSG00000181585TMIE2no signal346742823467523761
ENSG000002643062no signal34659199646592047-1
ENSG00000012223LTF2no signal34647713646526724-1
ENSG00000145040UCN22no signal34859916048601206-1
ENSG00000164048ZNF5892no signal348282590483407431
ENSG00000160796NBEAL22no signal347021173470511931
ENSG00000160808MYL32no signal34689936246923659-1
ENSG00000178252WDR62no signal349044495490533861
ENSG00000178467P4HTM2no signal349027319490445871
ENSG00000221883ARIH2OS2no signal34895522148956818-1
ENSG00000213672NCKIPSD2no signal34870136448723797-1
ENSG000002704412no signal34917751949198284-1
ENSG00000172053QARS2no signal34913336549142553-1
ENSG00000178149DALRD32no signal34905292149059726-1
ENSG000002306982no signal349936735499411901
ENSG000002636512no signal34985638749856486-1
ENSG00000067560RHOA2no signal34939657849450431-1
ENSG00000233276GPX12no signal34939460949396033-1
ENSG00000207922MIR5662no signal350210759502108521
ENSG00000164077MON1A2no signal34994630249967606-1
ENSG000002280082no signal349941278499543701
ENSG00000068028RASSF12no signal35036721950378411-1
ENSG00000114383TUSC22no signal35035745850365682-1
ENSG00000114378HYAL12no signal35033732050349812-1
ENSG00000114353GNAI22no signal350263724502967871
ENSG00000007402CACNA2D22no signal35040023350541675-1
ENSG000002721042no signal350388323504053541
ENSG00000114395CYB561D22no signal350388126503958911
ENSG00000180929GPR622no signal351989330519915091
ENSG000002247922no signal351851619518536511
ENSG00000145050MANF2no signal351422478514268281
ENSG000002733562no signal350707420507094791
ENSG00000010318PHF72no signal352444673524576571
ENSG00000242797GLYCTK-AS12no signal35232259952333083-1
ENSG00000243989ACY12no signal352009066520232131
ENSG000002547822no signal35199522852008047-1
ENSG00000252768RNU6-856P2no signal35258586252585959-1
ENSG00000168268NT5DC22no signal35255838652569070-1
ENSG00000010319SEMA3G2no signal35246706952479101-1
ENSG00000272573MUSTN12no signal35286713052869235-1
ENSG00000055955ITIH42no signal35284699152865495-1
ENSG000002711372no signal352787542527887061
ENSG00000114902SPCS12no signal352738971527421821
ENSG00000056736IL17RB2no signal353880607538998271
ENSG00000016391CHDH2no signal35384636253880417-1
ENSG000002126082no signal35342174053421863-1
ENSG000002298632no signal357168170571687511
ENSG00000163946FAM208A2no signal35665416156717265-1
ENSG00000229806RPS15P52no signal354660242546606731
ENSG000001138112no signal35391843753926015-1
ENSG00000163681SLMAP2no signal357741177579148951
ENSG00000174839DENND6A2no signal35761118457678816-1
ENSG00000210841RNU6ATAC26P2no signal357605174576052991
ENSG00000163618CADPS2no signal36238402262861054-1
ENSG000002524202no signal36172480161724903-1
ENSG000002425452no signal35945005659496404-1
ENSG00000213509PPIAP162no signal357927545579280311
ENSG00000163636PSMD62no signal36399622564009658-1
ENSG00000188817SNTN2no signal363638344636646961
ENSG000002260822no signal362912046629125571
ENSG00000272610MAGI1-IT12no signal36585849065940233-1
ENSG00000223409RPL17P172no signal365829565658301211
ENSG00000241158ADAMTS9-AS12no signal364547014645738781
ENSG000002439932no signal36443015864431152-1
ENSG00000242094FOXP1-IT12no signal37161940671623608-1
ENSG000002120952no signal368684067686841601
ENSG00000144749LRIG12no signal36642922166551687-1
ENSG00000241587RN7SL482P2no signal366374279663745741
ENSG000002426092no signal372136039721368761
ENSG00000163421PROK22no signal37182080771834357-1
ENSG00000163412EIF4E32no signal37172456771803924-1
ENSG00000213452AKR1B1P22no signal374185110741860431
ENSG00000239119RNU7-119P2no signal37364309173643153-1
ENSG000002415372no signal372821690728226221
ENSG000002443452no signal37255395772599703-1
ENSG00000244674RPS3AP152no signal37559130075592080-1
ENSG000002437942no signal375570954755711631
ENSG000002636892no signal37458393474584022-1
ENSG000002121042no signal37646704776467131-1
ENSG000002228832no signal37601413176014220-1
ENSG00000172969FRG2C2no signal375713481757163711
ENSG00000241532AGGF1P32no signal37570271275703924-1
ENSG00000243877HMGB1P382no signal38000671680007292-1
ENSG00000169855ROBO12no signal37864639079816965-1
ENSG00000239226MRPS17P32no signal378574251785746351
ENSG00000241095CYP51A1P12no signal38285566682857172-1
ENSG000002394402no signal382035289825128261
ENSG00000222389RNU2-28P2no signal381558627815588151
ENSG00000271389OSBPL9P12no signal380212477802139451
ENSG00000241861GAPDHP502no signal38909659289097584-1
ENSG000002397672no signal38631370586316511-1
ENSG00000243915PRKRIRP22no signal386061711860642701
ENSG000002161363no signal39615215996152254-1
ENSG00000178694NSUN33no signal393781760938473891
ENSG00000178700DHFRL13no signal39376668093782233-1
ENSG00000184500PROS13no signal39359188193692910-1
ENSG00000144810COL8A13no signal399357319995180701
ENSG000002444643no signal399316908993426641
ENSG00000064225ST3GAL63no signal398451080985400451
ENSG00000080822CLDND13no signal39821675698241910-1
ENSG000002422993no signal3101295333101295791-1
ENSG00000181458TMEM45A3no signal31002114631002962881
ENSG000002733743no signal39952154399524902-1
ENSG00000241787MTND4P163no signal3106613199106614565-1
ENSG00000201065RNU6-461P3no signal3102473908102474014-1
ENSG00000144815NXPE33no signal31014980461015470731
ENSG000002015113no signal31013662651013663661
ENSG00000114439BBX3no signal31072417831075301711
ENSG00000252626RNU6-1308P3no signal31067264151067265171
ENSG000002396323no signal3106614576106615255-1
ENSG000002445613no signal31091154631091167171
ENSG00000163530DPPA23no signal3109012635109035364-1
ENSG00000239314MORC1-AS13no signal31088203031088291891
ENSG00000243188HNRNPA1P173no signal3108044367108045661-1
ENSG00000153283CD963no signal31110115661113845971
ENSG000002447223no signal3110401133110402001-1
ENSG000002525413no signal31092164921092165761
ENSG000002727613no signal3112315641112320749-1
ENSG000002430813no signal3112115494112127981-1
ENSG000002447203no signal31113525191113539361
ENSG000002393113no signal3111185160111215942-1
ENSG000002400573no signal31127383791129021481
ENSG00000206531CD200R1L3no signal3112534556112565703-1
ENSG000002427703no signal31125213251125316661
ENSG000002422903no signal31141724401142389791
ENSG000002426593no signal3113465719113466255-1
ENSG00000265253MIR44463no signal31133137231133137891
ENSG000002434833no signal3112760237112760661-1
ENSG00000200372RNU5E-8P3no signal3116683959116684074-1
ENSG00000241397LINC009033no signal31162713201162871111
ENSG00000172020GAP433no signal31153421711154403371
ENSG00000240002YBX1P33no signal31146493881146502961
ENSG000002707823no signal3120643459120644005-1
ENSG000002426223no signal31198137421198556301
ENSG000002428163no signal31175095201175126121
ENSG000002214743no signal31220007001220007691
ENSG00000173226IQCB13no signal3121488610121553926-1
ENSG000002386703no signal31213101411213102411
ENSG000002421033no signal31210758381210767871
ENSG00000173175ADCY53no signal3123001143123168605-1
ENSG00000163840DTX3L3no signal31222830851222940501
ENSG000002709013no signal31222038441222040831
ENSG00000221955SLC12A83no signal3124801480124998021-1
ENSG00000244286ITGB5-AS13no signal31245000021245066041
ENSG00000175455CCDC143no signal3123616152123680564-1
ENSG000002731233no signal31234346981234352461
ENSG000002430723no signal31253984171253986251
ENSG000002529653no signal3125247088125247193-1
ENSG00000114520SNX43no signal3125165495125239041-1
ENSG000002500123no signal31258030631258141921
ENSG00000114544SLC41A33no signal3125725198125820404-1
ENSG00000241278ENPP7P43no signal31255670661256282151
ENSG000002728403no signal31254935571255167961
ENSG00000159685CHCHD63no signal31264230631266792491
ENSG00000163885CCDC373no signal31261137821261553991
ENSG000002509343no signal31259856391260101221
ENSG000002430223no signal3128567516128568242-1
ENSG00000239405TMED10P23no signal31282568631282574741
ENSG00000058262SEC61A13no signal31277704841277905261
ENSG00000201288RNU6-1047P3no signal3126959811126959917-1
ENSG00000271270TMCC1-AS13no signal31296127141296374181
ENSG00000163913IFT1223no signal31291589681292391981
ENSG00000241673RPS27P123no signal3128936936128937193-1
ENSG00000206384COL6A63no signal31302791781303969991
ENSG00000172752COL6A53no signal31300643591302036881
ENSG000002505803no signal31299185511299187611
ENSG000002516103no signal3129774567129774763-1
ENSG000002501293no signal3130772161130791183-1
ENSG00000034533ASTE13no signal3130732719130746493-1
ENSG00000232829GSTO3P3no signal31305465031305472201
ENSG00000174640SLCO2A13no signal3133651540133771028-1
ENSG00000144867SRPRB3no signal31335028771335446161
ENSG000002506083no signal3131043936131100319-1
ENSG00000201550RNU6-726P3no signal3130811665130811771-1
ENSG00000241438TDGF1P63no signal31358743911358748381
ENSG000002272673no signal31357740261357746061
ENSG000002606333no signal3134066130134068075-1
ENSG000002726093no signal3137723491137723964-1
ENSG00000242070NPM1P173no signal31374426161374433851
ENSG000002438863no signal3137254414137254984-1
ENSG000002142833no signal3136617918136618918-1
ENSG00000201600RN7SKP1243no signal3139302947139303287-1
ENSG000002142803no signal3139301770139302435-1
ENSG00000184814PRR23B3no signal3138737873138739768-1
ENSG00000158258CLSTN23no signal31396540271402962391
ENSG00000250161TRMT112P53no signal3139563920139564253-1
ENSG00000244692RN7SL724P3no signal3139328513139328781-1
ENSG00000069849ATP1B33no signal31415949661416453561
ENSG00000114124GRK73no signal31414969901415373321
ENSG000002415263no signal31414432671414433681
ENSG000002161843no signal3140208894140208986-1
ENSG00000202125RNU1-100P3no signal3142139047142139211-1
ENSG00000251804RNU6-1294P3no signal3142126499142126579-1
ENSG000002335973no signal3141762465141763040-1
ENSG00000114698PLSCR43no signal3145910126145968966-1
ENSG000002443583no signal31456576991456793231
ENSG00000120756PLS13no signal31423152291424325061
ENSG000002556373no signal31421605281421606041
ENSG000002424403no signal31479986781481177431
ENSG00000241457PLSCR5-AS13no signal31463073891463081121
ENSG00000199812RNU6-428P3no signal31462892641462893701
ENSG00000196428TSC22D23no signal31501261221501842181
ENSG00000206199ANKUB13no signal3149478892149686172-1
ENSG000002438853no signal3149101966149103587-1
ENSG00000163755HPS33no signal31488473711488915191
ENSG00000181631P2RY133no signal3151044100151047336-1
ENSG00000239570SETP113no signal31509872281509879171
ENSG000002602343no signal3150600784150659530-1
ENSG000002445453no signal31523659351523682361
ENSG000002433053no signal3152175548152214602-1
ENSG000002399413no signal3151835962151869513-1
ENSG000002429083no signal3151469231151645963-1
ENSG000002435183no signal3155119118155121188-1
ENSG00000239443PABPC1P103no signal3155027216155027596-1
ENSG00000196549MME3no signal31547419131549014971
ENSG000002001623no signal31533251661533252681
ENSG00000241879KLF3P23no signal31566953471566956141
ENSG00000174928C3orf333no signal3155480401155524140-1
ENSG000002149193no signal3155459933155461515-1
ENSG000002436753no signal31584812201584815421
ENSG000002431653no signal3158344445158344638-1
ENSG00000168779SHOX23no signal3157814948157824292-1
ENSG00000174899C3orf553no signal31572610351573955381
ENSG00000242107LINC011003no signal31597338111597492101
ENSG00000263634MIR39193no signal31590004351590005231
ENSG000002717783no signal31585003361585009131
ENSG00000121871SLITRK33no signal3164904508164914897-1
ENSG000002667573no signal3163373092163373169-1
ENSG00000207779MIR15B3no signal31601223761601224731
ENSG000002487103no signal3159945241160167617-1
ENSG00000173905GOLIM43no signal3167726465167813763-1
ENSG00000241203HMGN2P263no signal31676765321676768701
ENSG000002424563no signal3165878991165879756-1
ENSG000002700963no signal31695127501695140011
ENSG00000184378ACTRT33no signal3169484709169487683-1
ENSG000002418823no signal31680063411680090161
ENSG00000206120EGFEM1P3no signal31679673101685483871
ENSG00000235943TMEM212-IT13no signal31716122261716130301
ENSG00000186329TMEM2123no signal31715611391716565051
ENSG00000154310TNIK3no signal3170779128171178197-1
ENSG000002390963no signal3179332563179332666-1
ENSG000002647113no signal3172389349172389429-1
ENSG00000224426SLC31A1P13no signal3172321230172321796-1
ENSG000002233873no signal3172278678172313397-1
ENSG000002420683no signal3180490538180491702-1
ENSG00000213158GAPDHP363no signal31799189241799308961
ENSG00000201822RNA5SP1493no signal3179879674179879765-1
ENSG000002433783no signal31824097161824100731
ENSG000002420123no signal31820829351820860441
ENSG00000266317RN7SL703P3no signal31815311891815314881
ENSG000002131573no signal3180605465180605863-1
ENSG00000233441CYP2AB1P3no signal3183613688183628724-1
ENSG00000180834MAP6D13no signal3183533664183543382-1
ENSG00000233885YEATS2-AS13no signal3183524245183528571-1
ENSG00000243368MCCC1-AS13no signal31827340431827355961
ENSG000002727213no signal3183851807183853026-1
ENSG000002335763no signal31837945671838020071
ENSG00000178084HTR3C3no signal31837708351837784591
ENSG000002729223no signal31844606061844610721
ENSG00000230215EIF2B5-AS13no signal3184264502184274706-1
ENSG00000163882POLR2H3no signal31840795061840863841
ENSG00000163888CAMK2N23no signal3183977001183979251-1
ENSG000001970993no signal3186435038186478330-1
ENSG00000145192AHSG3no signal31863307121863391071
ENSG00000136527TRA2B3no signal3185633694185655924-1
ENSG00000175077RTP13no signal31869152741869192531
ENSG000001984913no signal3186914878186925417-1
ENSG000002322333no signal3186528669186543310-1
ENSG00000263776SNORA43no signal31865054011865055381
ENSG00000253548PYDC23no signal31911789521911792451
ENSG00000198398TMEM2073no signal3190146444190167665-1
ENSG00000212489RNU6-1109P3no signal3189883206189883312-1
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