Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

Capan-2 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 3.22
Chromosome Average Copy Number: 3.29

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
125593129256469470loss
172768499728111497no signal
161736161516284no signal
116153498161549670loss
116155011172862103no signal
117286320255833424no signal
125646987454634734no signal
145466511727684192no signal
1728119041214362202no signal
11214471371453666953no signal
11453721431453925254no signal
11453949551986778034no signal
11986817382008815954no signal
12008863332492243894no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000207181SNORA14B4no signal1235291118235291252-1
ENSG00000236863RPL23AP234no signal12354591802354596501
ENSG00000229795RPS21P14no signal12355963002355965461
ENSG00000235638MTND6P144no signal12357008202357013411
ENSG00000235674LDHAP24no signal12359013052359022891
ENSG00000222650RNU2-70P4no signal12364310802364312581
ENSG00000223776LGALS8-AS14no signal1236686369236687808-1
ENSG00000119285HEATR14no signal1236712305236767804-1
ENSG000002321544no signal1238111317238112443-1
ENSG00000225723MTND6P154no signal12381125142381130341
ENSG00000224783MIPEPP24no signal1238940349238942500-1
ENSG000002319794no signal1240078739240080255-1
ENSG000002260144no signal1240713167240713678-1
ENSG000002314404no signal1240751822240754048-1
ENSG00000233615HNRNPA1P424no signal12410829532410839091
ENSG000002380854no signal1241161751241162094-1
ENSG00000196289BECN1P14no signal12421210392421223641
ENSG00000197769MAP1LC3C4no signal1242158792242162375-1
ENSG00000222120RNA5SP814no signal12422975742422976831
ENSG00000054282SDCCAG84no signal12434193202436633941
ENSG000002321844no signal1243866159243904123-1
ENSG000002299604no signal1244232122244256328-1
ENSG00000252282RNU6-1089P4no signal12451863172451864201
ENSG00000225222CHCHD4P54no signal12463420802463425061
ENSG000002350214no signal12468533492468551231
ENSG00000143653SCCPDH4no signal12468873492469314391
ENSG000002020794no signal12474581372474582431
ENSG00000232215OR2L6P4no signal12481664312481673701
ENSG000002000854no signal12481924222481925231
ENSG00000171180OR2M44no signal12484022312484031661
ENSG00000196944OR2T44no signal12485248832485259291
ENSG00000227152OR2T74no signal12486045082486054341
ENSG00000196240OR2T24no signal12486160772486171301
ENSG00000182783OR2T294no signal1248721784248722797-1
ENSG00000266949LYPD84no signal1248902716248903150-1
ENSG00000175137SH3BP5L4no signal1249104648249120832-1
ENSG000002253384no signal1212482393212482860-1
ENSG000002280674no signal12127190362127294071
ENSG00000264590RN7SL512P4no signal1212789050212789295-1
ENSG000002260364no signal12128206382128210971
ENSG000002351824no signal12130266222130267681
ENSG00000162769FLVCR14no signal12130315972130727051
ENSG000002282554no signal12139047592139679301
ENSG00000117724CENPF4no signal12147765382148379311
ENSG00000136636KCTD34no signal12157407352157951491
ENSG00000234070SPATA17-AS14no signal1217954540217958462-1
ENSG00000231814LINC002104no signal12180662422180941461
ENSG000002307144no signal12182051772182070021
ENSG00000215817ZC3H11B4no signal1219782859219786462-1
ENSG000002216734no signal12201360282201362061
ENSG00000162813BPNT14no signal1220230824220263804-1
ENSG00000067704IARS24no signal12202674442203213801
ENSG00000116141MARK14no signal12207015682208378031
ENSG00000117791MARC24no signal12209215672209581501
ENSG00000221571RNU6ATAC35P4no signal12209989622209993891
ENSG000002380784no signal12210025972210057711
ENSG00000136630HLX4no signal12210516992210584011
ENSG00000234419CICP134no signal12226414362226442241
ENSG00000197520FAM177B4no signal12229105492229241471
ENSG000002266014no signal12233544862233614961
ENSG00000143514TP53BP24no signal1223967601224033674-1
ENSG00000188460ACTBP114no signal1224051428224052553-1
ENSG000002430004no signal12241835972241913561
ENSG00000252484RN7SKP494no signal1224294984224295243-1
ENSG000002367734no signal1224363178224363408-1
ENSG000002018984no signal12243673432243674691
ENSG00000266618MIR47424no signal1224585929224586013-1
ENSG00000143786CNIH34no signal12246223622249282511
ENSG000002333844no signal1224802998224803922-1
ENSG00000185842DNAH144no signal12250839642255869961
ENSG00000223306RNU6-1304P4no signal12259289772259290841
ENSG00000243709LEFTY14no signal1226073982226099082-1
ENSG00000143811PYCR24no signal1226107578226111978-1
ENSG00000183814LIN94no signal1226418850226497570-1
ENSG00000236994YBX1P94no signal1226505716226506394-1
ENSG00000143799PARP14no signal1226548392226595780-1
ENSG00000177770CDKN2AIPNLP14no signal1226680889226681190-1
ENSG00000143740SNAP474no signal12279162402279689271
ENSG00000233003CICP264no signal1228162980228165894-1
ENSG00000181873IBA574no signal12283535162283699581
ENSG000002700944no signal12285819912285846681
ENSG00000199337RNA5S34no signal1228750497228750615-1
ENSG00000168118RAB4A4no signal12294068222294416411
ENSG00000143632ACTA14no signal1229566992229569845-1
ENSG00000135776ABCB104no signal1229652329229694442-1
ENSG000002280584no signal12301384772301429091
ENSG00000119280C1orf1984no signal1230972865231005335-1
ENSG000002233934no signal12310105922310147611
ENSG000002389854no signal1231031178231031250-1
ENSG00000223982SNRPD2P24no signal1231611702231612034-1
ENSG00000229228LINC005824no signal1231727038231747836-1
ENSG00000226758DISC1-IT14no signal12320615802320809791
ENSG000002363724no signal1232310678232315859-1
ENSG00000242794RN7SL299P4no signal12323586122323588911
ENSG000002364974no signal1232863000232878461-1
ENSG00000206835RNU1-74P4no signal1232967763232967933-1
ENSG00000265744MIR44274no signal12337598982337599651
ENSG00000236101RAC1P74no signal1234162597234162973-1
ENSG000002317684no signal1234663637234667525-1
ENSG000002414754no signal12347960172348028501
ENSG00000224040HMGN1P44no signal1182911250182911539-1
ENSG000002275544no signal1183723553183724072-1
ENSG000002527904no signal11846470681846471411
ENSG000002280124no signal1187505233187505431-1
ENSG000001507324no signal1188036429188036656-1
ENSG000002711874no signal1191148651191148869-1
ENSG000002338824no signal1191190289191197597-1
ENSG00000127074RGS134no signal11926052751926293901
ENSG00000231767MIR44264no signal11926853131926857831
ENSG000002725794no signal1193059996193060686-1
ENSG00000134371CDC734no signal11930911471932230311
ENSG00000221680MIR12784no signal11931056331931057131
ENSG00000162687KCNT24no signal1196194909196578355-1
ENSG00000116785CFHR34no signal11967439251967632031
ENSG000002285304no signal11998461061998466861
ENSG00000202491RNU6-716P4no signal1199977633199977735-1
ENSG00000118193KIF144no signal1200520628200589862-1
ENSG00000118197DDX594no signal1200593024200639097-1
ENSG000002600884no signal12006386352006633781
ENSG00000201032RNU6-704P4no signal1200902473200902575-1
ENSG00000174307PHLDA34no signal1201434620201438365-1
ENSG00000159176CSRP14no signal1201452658201478584-1
ENSG000002363904no signal1201642233201643272-1
ENSG00000200942RNU6-501P4no signal12017025342017026331
ENSG000002346784no signal1201969222201979481-1
ENSG00000143858SYT24no signal1202559724202679545-1
ENSG000002268624no signal12025733962025744211
ENSG00000117139KDM5B4no signal1202696526202778598-1
ENSG000001994714no signal1202884008202884108-1
ENSG00000143847PPFIA44no signal12029956262030478681
ENSG000002246714no signal1203113092203122028-1
ENSG00000188783PRELP4no signal12034449562034604801
ENSG00000058673ZC3H11A4no signal12037647822038232521
ENSG00000182004SNRPE4no signal12038307312038396781
ENSG000002610654no signal12041001902041010941
ENSG000002316914no signal12042461332042470761
ENSG000002529464no signal1204873875204873946-1
ENSG000002715804no signal12050602912050610741
ENSG00000133069TMCC24no signal12051973042052424711
ENSG00000162873KLHDC8A4no signal1205305220205326218-1
ENSG00000226235LEMD1-AS14no signal12053423802053565681
ENSG00000186007LEMD14no signal1205350506205425082-1
ENSG00000196550FAM72A4no signal12061369162061551511
ENSG000002407544no signal1206288156206306131-1
ENSG00000136653RASSF54no signal12066808792067626161
ENSG00000143486EIF2D4no signal1206744620206785904-1
ENSG000002716804no signal12070792732070797381
ENSG00000182795C1orf1164no signal1207191866207206101-1
ENSG00000123838C4BPA4no signal12072776072073183171
ENSG00000197721CR1L4no signal12078184582079117611
ENSG000002342194no signal12079359292079366081
ENSG00000203709C1orf1324no signal1207974863208042495-1
ENSG000002268434no signal1208428635208428721-1
ENSG000002614534no signal1208780445208785537-1
ENSG00000225712ATP5G2P14no signal1209441143209441568-1
ENSG000002242604no signal1209701800209741018-1
ENSG00000008118CAMK1G4no signal12097570622097872831
ENSG00000264831MIR42604no signal1209796789209796855-1
ENSG00000117594HSD11B14no signal12098595102099082951
ENSG000002613144no signal1211756357211757067-1
ENSG000002220804no signal1211826798211826891-1
ENSG00000117650NEK24no signal1211836114211848960-1
ENSG00000143493INTS74no signal1212113741212208884-1
ENSG000002300634no signal12124707902124729211
ENSG00000018625ATP1A24no signal11600855491601133811
ENSG00000162734PEA154no signal11601751271601851661
ENSG00000235082SUMO1P34no signal11602871931602874961
ENSG00000171786NHLH14no signal11603368571603426381
ENSG00000066294CD844no signal1160510885160549306-1
ENSG000002642864no signal1160515438160515535-1
ENSG000002288634no signal11606405681606536981
ENSG000002130804no signal11608647701608658661
ENSG000002701494no signal1160967747161008752-1
ENSG00000158874APOA24no signal1161192082161193421-1
ENSG00000143252SDHC4no signal11612840471613329841
ENSG00000143226FCGR2A4no signal11614752201614938031
ENSG000002245154no signal1161526080161526868-1
ENSG00000241347RN7SL466P4no signal11617055981617058891
ENSG00000118217ATF64no signal11617360841619338601
ENSG000002270944no signal1162286642162287584-1
ENSG00000212527RNA5SP634no signal11634792741634793851
ENSG000002254874no signal1164890555164890866-1
ENSG000002247024no signal11651798641651823271
ENSG000002380224no signal11651852171651883411
ENSG00000143171RXRG4no signal1165370159165414433-1
ENSG000002069904no signal1165631822165631924-1
ENSG000002158354no signal1166244866166246834-1
ENSG000002722054no signal1167189068167189749-1
ENSG000002334114no signal1167426620167427898-1
ENSG000002310294no signal11675606291675610831
ENSG000002416664no signal1167596622167599911-1
ENSG00000143147GPR1614no signal1168053997168106821-1
ENSG00000143155TIPRL4no signal11681481711681699501
ENSG00000237049RPL34P14no signal11681798541681802071
ENSG00000213064SFT2D24no signal11681951761682222631
ENSG000002277224no signal11683382921683388391
ENSG00000143184XCL14no signal11685457111685513151
ENSG00000143156NME74no signal1169101769169337205-1
ENSG000002032604no signal1169990599169991390-1
ENSG000002353034no signal11705679951706164801
ENSG000002066924no signal1171223045171223161-1
ENSG00000034971MYOC4no signal1171604557171621823-1
ENSG00000230364RPL4P34no signal1171652268171653578-1
ENSG00000010165METTL134no signal11717507881717831631
ENSG00000208317SNORD784no signal1173834760173834824-1
ENSG00000252231RNA5SP674no signal11738902081738903381
ENSG00000236535RC3H1-IT14no signal1173978405173985344-1
ENSG000002388724no signal1174169267174169368-1
ENSG00000116147TNR4no signal1175284330175712906-1
ENSG000002324634no signal1176200336176200966-1
ENSG00000152092ASTN14no signal1176826438177134109-1
ENSG000002275794no signal1177362423177566844-1
ENSG00000075391RASAL24no signal11780628641784486441
ENSG000001849094no signal11785119501785175791
ENSG00000201347RNA5SP694no signal11785300481785301641
ENSG000002730624no signal1178693441178695420-1
ENSG00000116194ANGPTL14no signal1178818840178840187-1
ENSG00000116199FAM20B4no signal11789949391790456971
ENSG000002327504no signal1179004444179004787-1
ENSG00000231564EIF4A1P114no signal11791708401791710611
ENSG000002319664no signal1179798744179805259-1
ENSG00000169905TOR1AIP24no signal1179809102179846938-1
ENSG000002351454no signal11799378211799386411
ENSG000002431554no signal1180913178180945618-1
ENSG000001794524no signal11812055241812077401
ENSG00000222397RN7SKP2294no signal1181808608181808909-1
ENSG000002286644no signal11822976321822981421
ENSG00000135838NPL4no signal11827584281827995191
ENSG00000183558HIST2H2AA34no signal1149813505149814478-1
ENSG00000184260HIST2H2AC4no signal11498585251498589611
ENSG00000014914MTMR114no signal1149900543149908791-1
ENSG00000136631VPS454no signal11500393691501175051
ENSG000002385264no signal11502340931502341961
ENSG00000118292C1orf544no signal11502406001502533271
ENSG00000163125RPRD24no signal11503355671504490421
ENSG00000264553MIR42574no signal11505244051505244901
ENSG00000143387CTSK4no signal1150768684150780799-1
ENSG00000143409FAM63A4no signal1150969025150980851-1
ENSG00000143458GABPB24no signal11510430541510980181
ENSG000002611684no signal1151102551151104086-1
ENSG00000143434SEMA6C4no signal1151104161151119104-1
ENSG00000143398PIP5K1A4no signal11511704251512220121
ENSG000002379764no signal11513194431513205031
ENSG000002325364no signal11515129921515343311
ENSG00000143376SNX274no signal11515845411516715671
ENSG00000206635RNU6-1062P4no signal11516018001516019061
ENSG00000182134TDRKH4no signal1151742583151763892-1
ENSG00000229021NBPF18P4no signal11519670071520152501
ENSG00000163191S100A114no signal1152004982152020383-1
ENSG00000143631FLG4no signal1152274651152297679-1
ENSG00000187223LCE2D4no signal11526358721526371351
ENSG00000198854C1orf684no signal11526919981526929051
ENSG00000240386LCE1F4no signal11527488481527494451
ENSG00000235942LCE6A4no signal11528153441528164591
ENSG00000163207IVL4no signal11528810211528843621
ENSG00000159516SPRR2G4no signal1153122058153123345-1
ENSG00000203784LELP14no signal11531759191531775961
ENSG000002382794no signal11535060791535075911
ENSG00000196754S100A24no signal1153533584153540366-1
ENSG00000143621ILF24no signal1153634512153643524-1
ENSG000002385114no signal1153726600153726703-1
ENSG000002526694no signal1153970517153970627-1
ENSG000002362634no signal1155180942155183610-1
ENSG000002161094no signal1155206540155206628-1
ENSG00000116521SCAMP34no signal1155225770155232221-1
ENSG00000160753RUSC14no signal11552906871553009051
ENSG000002388054no signal1155385349155385453-1
ENSG00000225082DAP3P14no signal11555564351555719881
ENSG00000132676DAP34no signal11556577511557088011
ENSG000002276734no signal1155679889155680354-1
ENSG00000132718SYT114no signal11558293001558549901
ENSG00000201614RNU4-19P4no signal11558640721558641771
ENSG00000116584ARHGEF24no signal1155916630155976861-1
ENSG00000116586LAMTOR24no signal11560245431560283011
ENSG00000163468CCT34no signal1156278759156337664-1
ENSG000002281554no signal11562933021562934871
ENSG000002388434no signal11564991221564992211
ENSG000002375884no signal1156657487156661789-1
ENSG00000143320CRABP24no signal1156669398156675608-1
ENSG00000143294PRCC4no signal11567204021567706071
ENSG000002299614no signal11571551781571571951
ENSG000002272174no signal11576615521576662491
ENSG000002317004no signal11576788761576794331
ENSG00000163534FCRL14no signal1157764193157789895-1
ENSG000002316664no signal1158101834158110429-1
ENSG00000158477CD1A4no signal11582239271582280591
ENSG00000163554SPTA14no signal1158580496158656488-1
ENSG00000203757OR6K34no signal1158686958158687953-1
ENSG000002256704no signal1159165775159177763-1
ENSG00000213088DARC4no signal11591730971591762901
ENSG00000196266OR10J34no signal1159283460159284449-1
ENSG00000162723SLAMF94no signal1159921282159924044-1
ENSG00000134243SORT12no signal1109852192109940573-1
ENSG00000065135GNAI32no signal11100912331101369751
ENSG000002417202no signal11102684421103178741
ENSG00000197106SLC6A172no signal11106931081107448241
ENSG00000224699LAMTOR5-AS12no signal11109254411109749821
ENSG000002616542no signal1111478991111484975-1
ENSG00000231346LINC011602no signal1112142277112151345-1
ENSG00000171385KCND32no signal1112313284112531777-1
ENSG000002391112no signal11127381241127382281
ENSG00000134245WNT2B2no signal11130091631130727871
ENSG00000007341ST7L2no signal1113066140113163447-1
ENSG00000237278RLIMP22no signal1113667943113669505-1
ENSG00000081026MAGI32no signal11139333711142285451
ENSG000002707802no signal1114544055114544857-1
ENSG00000175984DENND2C2no signal1115125469115213043-1
ENSG00000116748AMPD12no signal1115215719115238239-1
ENSG000002019002no signal11152703411152704451
ENSG00000134198TSPAN22no signal1115590632115632121-1
ENSG000002269732no signal11160145621160186481
ENSG000002075022no signal1116164493116164626-1
ENSG000002210402no signal11168212281168214421
ENSG000002692792no signal1116915890116926718-1
ENSG000002331542no signal1116966346117021464-1
ENSG000002249502no signal1117035645117041834-1
ENSG00000116815CD582no signal1117057157117113661-1
ENSG000002714272no signal1117907521117908095-1
ENSG000002386792no signal11198016641198017641
ENSG000002277122no signal1119802888119869926-1
ENSG00000116882HAO22no signal11199114021199367531
ENSG00000230921HAO2-IT12no signal11199115691199129541
ENSG00000203859HSD3B22no signal11199575541199656581
ENSG000002327802no signal1119977079119977703-1
ENSG00000226443GAPDHP322no signal1120076372120077369-1
ENSG00000249798HSD3BP32no signal11200811321200885361
ENSG00000240244GAPDHP332no signal1120138790120139802-1
ENSG000002330292no signal11209256341209330001
ENSG00000198019FCGR1B2no signal1120926979120935937-1
ENSG000002308062no signal1121102017121140666-1
ENSG000002654663no signal11426560621426561441
ENSG000002360553no signal1142790583142791175-1
ENSG00000232745ANKRD20A14P3no signal11428035321428272351
ENSG000002308503no signal11431190611432334171
ENSG000002346543no signal11432458231432462101
ENSG00000236334PPIAL4G3no signal1143767144143767881-1
ENSG00000215784FAM72D3no signal1143896452143913143-1
ENSG00000235398LINC006233no signal1144275918144341756-1
ENSG00000201699RNU1-59P3no signal11445340381445341991
ENSG000002158613no signal1144676874144679969-1
ENSG00000181039ANKRD34A4no signal11454705081454756461
ENSG00000152022LIX1L4no signal11454770851455016691
ENSG00000117262GPR89A4no signal1145764411145827103-1
ENSG000002357024no signal11458272051458331181
ENSG00000152042NBPF114no signal1146032647146082765-1
ENSG00000180867PDIA3P14no signal11466496921466512061
ENSG00000143140GJA54no signal1147228332147245484-1
ENSG00000121634GJA84no signal11473749461473813931
ENSG00000238677RNA5SP584no signal11476659931476661151
ENSG000002527444no signal11478023961478025191
ENSG00000256374PPIAL4D4no signal1148201752148202536-1
ENSG000002290024no signal11485428731485451281
ENSG00000230582PPIAL4F4no signal11488060151488067991
ENSG00000203817FAM72C4no signal1149438750149459549-1
ENSG000002342324no signal1149649060149719362-1
ENSG00000183598HIST2H3D4no signal1149784826149785236-1
ENSG00000201487SNORD45B2no signal176255162762552331
ENSG000002668322no signal176308317763084021
ENSG00000184005ST6GALNAC32no signal176540404771002861
ENSG00000251767RNU7-8P2no signal177886010778860711
ENSG00000243437RN7SL370P2no signal178111009781113011
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