Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

Caov-4 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 4.64
Chromosome Average Copy Number: 6.34

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
546271009462735030loss
546278212573216466no signal
515533118790147no signal
511881501313421748no signal
531343424416290507no signal
541629963462513068no signal
557326028573411442loss
5573421201698185696no signal
51698214011700824492loss
51700855451749587446no signal
51749637751763377392loss
51763506871788953995no signal
51788966191807903216no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG000002540666no signal5164647583164668758-1
ENSG00000254252RPL7P206no signal5165455572165456316-1
ENSG000002532696no signal5169199970169206369-1
ENSG00000168269FOXI16no signal51695329011695367271
ENSG00000182132KCNIP16no signal51697804911701636361
ENSG00000174705SH3PXD2B6no signal5171752185171881527-1
ENSG00000265160MIR50036no signal51720891681720892661
ENSG000002534456no signal5172117457172124723-1
ENSG00000212402SNORA74B6no signal51724477311724479311
ENSG000002072106no signal5172479455172479558-1
ENSG000002539556no signal51730066461730120711
ENSG00000185056C5orf476no signal51734007821734331431
ENSG000001700916no signal51734726071736705041
ENSG00000248929HIGD1AP36no signal51740599351740602121
ENSG000002511446no signal51742470301742533271
ENSG000002482936no signal51743535441743537201
ENSG00000248355ARL2BPP66no signal51747177341747182551
ENSG00000170085SIMC12loss51756653651757729941
ENSG00000122203KIAA11912loss5175773064175788971-1
ENSG00000146066HIGD2A2loss51758157481758167721
ENSG00000074276CDHR22loss51759695121760229751
ENSG00000169223LMAN25no signal5176758563176778853-1
ENSG000001700895no signal51772364081773777331
ENSG00000204677FAM153C5no signal51774334061774825601
ENSG00000177932ZNF354C5no signal51784874161785105381
ENSG000002539795no signal51788045061788058661
ENSG00000249140PRDX2P36no signal51789991571789997421
ENSG000002449456no signal5179022905179030742-1
ENSG00000169045HNRNPH16no signal5179041179179061785-1
ENSG00000204661C5orf606no signal5179068545179072047-1
ENSG000002282596no signal51790782981790794451
ENSG00000050748MAPK96no signal5179660143179719099-1
ENSG000002513526no signal5180098892180099598-1
ENSG00000206686RNU6-1036P6no signal51804342811804343841
ENSG000002502226no signal51806189241806214291
ENSG00000248275TRIM52-AS16no signal51806882131806993081
ENSG000002387456no signal51379591681379592711
ENSG000002426836no signal5138370837138371676-1
ENSG00000170469SPATA246no signal5138732252138739777-1
ENSG000002690716no signal51388521081388525061
ENSG000002496896no signal51388721231388726901
ENSG000002070206no signal5138934485138934586-1
ENSG00000146005PSD26no signal51391754061392240511
ENSG00000120306CYSTM16no signal51395542271396616371
ENSG00000222790RNU4-14P6no signal5139776908139777029-1
ENSG00000112855HARS26no signal51400710111400788891
ENSG00000204965PCDHA56no signal51402012221403919291
ENSG00000171815PCDHB16no signal51404309791404335121
ENSG00000113209PCDHB56no signal51405148001405177031
ENSG00000113211PCDHB66no signal51405296831405328681
ENSG00000196963PCDHB166no signal51405609801405657931
ENSG00000254221PCDHGB16no signal51407298281408925461
ENSG00000197948FCHSD16no signal5141018869141030986-1
ENSG00000113552GNPDA16no signal5141371314141392606-1
ENSG000002367146no signal51421251651421405631
ENSG00000113580NR3C16no signal5142657496142815077-1
ENSG000002494296no signal5142869420142910915-1
ENSG000002498816no signal51429851931432083371
ENSG000002134886no signal51439017031439025511
ENSG00000204928GRXCR26no signal5145239296145252531-1
ENSG000002393176no signal51455183341455185711
ENSG00000091009RBM276no signal51455831131457188141
ENSG000002500256no signal5145686661145756526-1
ENSG000002717246no signal5145755154145755782-1
ENSG00000249553PPP2R2B-IT16no signal5146293770146299069-1
ENSG000002681266no signal51476985501477018911
ENSG00000157510AFAP1L16no signal51486514341487213651
ENSG00000253618GRPEL2-AS16no signal5148727679148737205-1
ENSG000002515836no signal5149311577149312231-1
ENSG00000155850SLC26A26no signal51493403001493730181
ENSG000002383696no signal5149408912149409015-1
ENSG00000182578CSF1R6no signal5149432854149492935-1
ENSG00000019582CD746no signal5149781200149792492-1
ENSG000002503096no signal5150050220150051952-1
ENSG00000197083ZNF300P16no signal5150310207150325851-1
ENSG00000211445GPX36no signal51504001241504085541
ENSG00000197043ANXA66no signal5150480273150537443-1
ENSG000002534726no signal5150757564150758201-1
ENSG000002721126no signal5151104392151104917-1
ENSG000002420806no signal5151875279151875578-1
ENSG00000155506LARP16no signal51540924621541971671
ENSG000002714776no signal51547768511547779131
ENSG00000135077HAVCR26no signal5156512843156569880-1
ENSG000002514056no signal5156789623156887086-1
ENSG000002535196no signal51569929721569961061
ENSG000002537986no signal5157109993157117274-1
ENSG00000206819RNU6-260P6no signal51572361061572362121
ENSG00000222626RNU2-48P6no signal5157403774157403964-1
ENSG000002534226no signal5157505107157505772-1
ENSG000002534496no signal5157652360157661384-1
ENSG000002534246no signal51576831451576854441
ENSG000002541356no signal51579121981579614461
ENSG000002664326no signal51589529461589530181
ENSG00000170231FABP66no signal51596143741596657421
ENSG000002537726no signal51596745241596752241
ENSG00000022355GABRA16no signal51612741971613269751
ENSG000002500616no signal5162439271162864332-1
ENSG00000249449MRP63P66no signal51624662971624666051
ENSG00000038274MAT2B6no signal51629301201629463421
ENSG000002240126no signal5163136216163136520-1
ENSG00000174132FAM174A6no signal599871009999224451
ENSG00000222987RN7SKP686no signal51016382081016385141
ENSG00000250958LINC004926no signal51019170721019532931
ENSG000002537766no signal51041093421041354731
ENSG000002535846no signal5104253193104582065-1
ENSG000002510276no signal5106150898106346715-1
ENSG000002504416no signal5108230048108230329-1
ENSG000002660906no signal51090212811090213931
ENSG000002490686no signal5109175829109176393-1
ENSG000002147846no signal5110527924110528740-1
ENSG00000248430HMGB3P166no signal5111788400111788686-1
ENSG000002510146no signal51118826701118832021
ENSG00000153037SRP196no signal51121969191122054851
ENSG000001729016no signal51152981511153633161
ENSG000002722656no signal5115413807115414267-1
ENSG00000249582RPL7L1P46no signal5117114521117115227-1
ENSG00000172869DMXL16no signal51183734671185848331
ENSG000002488856no signal5118462477118464139-1
ENSG00000248979LAMTOR3P26no signal5118468346118468577-1
ENSG00000243333RN7SL174P6no signal5118642039118642326-1
ENSG000002136636no signal5118882826118883301-1
ENSG000002342596no signal51190158921190167751
ENSG00000181867FTMT6no signal51211876501211885191
ENSG000002496106no signal5121490191121491710-1
ENSG000002721396no signal5121646992121647368-1
ENSG000002499166no signal5121705457121719263-1
ENSG00000061455PRDM66no signal51224248161225299601
ENSG00000249400HMGB3P176no signal5122804475122805123-1
ENSG00000253807LINC011706no signal5123641923123740772-1
ENSG000002482966no signal5123828468123872041-1
ENSG00000222107RN7SKP1176no signal5124686561124686824-1
ENSG000002502696no signal5124718552124719148-1
ENSG000002499046no signal5125221978125222446-1
ENSG00000252185RNU6-752P6no signal5126091008126091109-1
ENSG00000113368LMNB16no signal51261123151261727121
ENSG000002509566no signal5126515448126515592-1
ENSG000002506036no signal5127174178127193496-1
ENSG000002459376no signal5127276118127418864-1
ENSG000002486346no signal51279996711280785221
ENSG00000186687LYRM76no signal51305065031305411191
ENSG000002025336no signal51318038391318039491
ENSG000002342906no signal5131804582131808735-1
ENSG00000113522RAD506no signal51318917111319803131
ENSG00000131437KIF3A6no signal5132028320132073330-1
ENSG00000164404GDF96no signal5132196873132202576-1
ENSG000002024176no signal51322810341322811461
ENSG000002720236no signal51322994621322998561
ENSG00000221287MIR1289-26no signal5132763288132763398-1
ENSG00000113558SKP16no signal5133484633133512729-1
ENSG000002509946no signal51337724021338282101
ENSG00000198868MIR44616no signal5134263720134264016-1
ENSG000002501676no signal51348952671349705641
ENSG000002640396no signal5135140194135140282-1
ENSG000002503786no signal51351483561351622711
ENSG00000164621SMAD5-AS16no signal5135465196135470579-1
ENSG000002498036no signal51358023661358559871
ENSG000002502846no signal51360706161360903751
ENSG00000120729MYOT6no signal51372034801372235401
ENSG000002664756no signal5137316150137316247-1
ENSG00000061492WNT8A6no signal51374195811374280541
ENSG00000199880RNU6-888P6no signal5137458700137458800-1
ENSG00000112983BRD86no signal5137475455137514675-1
ENSG00000120733KDM3B6no signal51376882851377727171
ENSG000002321296no signal51378878501378880501
ENSG00000244717RPS27P146no signal568765710687659631
ENSG000002492956no signal56877329968798293-1
ENSG000002501386no signal568927790689323121
ENSG00000205572SERF1B6no signal569321074693389401
ENSG000001799786no signal56939020269424261-1
ENSG000002055656no signal569803906698084221
ENSG00000172062SMN16no signal570220768702497691
ENSG000002516346no signal57039872570424580-1
ENSG00000215630GUSBP96no signal57043571670585611-1
ENSG00000247911HMGN1P126no signal57083347970833673-1
ENSG000002656136no signal57091081170910911-1
ENSG00000164326CARTPT6no signal571014990710168751
ENSG00000049883PTCD26no signal571616194716560521
ENSG000002067706no signal572064529720646381
ENSG00000263593MIR48046no signal572174418721744901
ENSG000002387386no signal57244993872450011-1
ENSG00000171617ENC16no signal57392323473937249-1
ENSG000002123636no signal57417848174178608-1
ENSG000002473726no signal57461598074632739-1
ENSG000002421986no signal574670288746706341
ENSG00000152359POC56no signal57496994975013313-1
ENSG000002516686no signal575466755754669281
ENSG000002511076no signal575576781755770921
ENSG000002386886no signal576079921760800241
ENSG00000264391RN7SL208P6no signal57613272776133020-1
ENSG00000145708CRHBP6no signal576248538762769831
ENSG00000251400ALDH7A1P16no signal576586093765876251
ENSG00000200331RNU6-183P6no signal57761074077610849-1
ENSG00000145685LHFPL26no signal57778103878065844-1
ENSG00000201955RNY3P16no signal57846605778466158-1
ENSG000002073916no signal578830676788307771
ENSG00000249778TRMT112P26no signal57932899479329125-1
ENSG00000228716DHFR6no signal57992204779950802-1
ENSG00000265684RN7SL378P6no signal581374246813745411
ENSG000002488706no signal58188259581883230-1
ENSG00000240411RPL5P166no signal582073616820744051
ENSG00000152422XRCC46no signal582373317826496061
ENSG000002433856no signal582497048824979601
ENSG000002500136no signal58317098583171640-1
ENSG00000252861RNU6-448P6no signal583492701834928071
ENSG000002148536no signal58429573884296113-1
ENSG000002502536no signal58450587884506721-1
ENSG000002510666no signal584845227848457701
ENSG00000250359PTP4A1P46no signal585383344853836651
ENSG00000241243RN7SL629P6no signal58659000886590290-1
ENSG000002493626no signal586957859869749641
ENSG00000164180TMEM161B6no signal58748545087565293-1
ENSG000002505556no signal587988468879886761
ENSG000002129306no signal590519236905197841
ENSG00000213730POLD2P16no signal592603135926041311
ENSG00000249353NPM1P276no signal59301854493019373-1
ENSG000002114986no signal593914474939145551
ENSG00000175471MCTP16no signal59403944694620279-1
ENSG00000178015GPR1506no signal594955782949578461
ENSG00000173221GLRX6no signal59508702395158709-1
ENSG000002510006no signal59517012895170750-1
ENSG00000213716FABP5P56no signal59530874595309150-1
ENSG00000206997RNU6-524P6no signal59554582595545931-1
ENSG000002721096no signal596140056961418081
ENSG000002487586no signal59652379496537584-1
ENSG000002494446no signal598825263988350711
ENSG000002503916no signal59928399999285287-1
ENSG00000249963EEF1A1P206no signal599332251993336361
ENSG000002497876no signal599737145997446031
ENSG000002496887no signal531754326317547631
ENSG000002388647no signal531824686318247891
ENSG000002308297no signal532222038322224531
ENSG00000207052RNU6-378P7no signal532309768323098741
ENSG000002229617no signal53237951332379573-1
ENSG000002491027no signal533009100330258301
ENSG000002506727no signal53309023233090455-1
ENSG000002514437no signal533229841332556591
ENSG00000242110AMACR7no signal53398628334008220-1
ENSG000002151567no signal534190161341937581
ENSG00000039560RAI147no signal534656342348327321
ENSG000002502347no signal53465651734657355-1
ENSG00000205838TTC23L7no signal534838938348995611
ENSG00000241829RPL21P547no signal534883162348836251
ENSG00000168724DNAJC217no signal534929698349590691
ENSG000002483497no signal53589629035896392-1
ENSG000002515917no signal53607189336072181-1
ENSG00000222743RNU6-1190P7no signal53762008737620190-1
ENSG00000248587GDNF-AS17no signal537840540378759011
ENSG000002485397no signal53789946537920971-1
ENSG000002497407no signal53873615738845931-1
ENSG000002692157no signal539105358391073501
ENSG00000251515CCDC11P17no signal53957158039572741-1
ENSG00000083720OXCT18no signal54173016741870621-1
ENSG00000151876FBXO48no signal541925356419418451
ENSG000002607868no signal542188368421916251
ENSG000002705138no signal542729240427296211
ENSG00000250722SEPP18no signal54279998242887494-1
ENSG000002150688no signal543041677430454921
ENSG000002504188no signal54469853344700910-1
ENSG00000263556RN7SL383P8no signal544716292447165871
ENSG00000249338HMGB1P476no signal55070545150706039-1
ENSG00000249270KATNBL1P46no signal551226642512278701
ENSG00000249069LINC010336no signal553616774537109551
ENSG000002405356no signal55431712754338672-1
ENSG00000248781PSMC1P46no signal55557113155572457-1
ENSG000002656656no signal55575286555752965-1
ENSG000002487276no signal55575362255777773-1
ENSG000002072936no signal55646493556465036-1
ENSG00000062194GPBP16no signal556469775565605061
ENSG000002482946no signal556869854569101681
ENSG000002494366no signal556910216569132581
ENSG000002481326no signal55740390957418168-1
ENSG00000202601MIR5826no signal55899943258999529-1
ENSG00000152931PART16no signal559783540598434841
ENSG00000035499DEPDC1B6no signal55989273959996017-1
ENSG00000213891RPL3P66no signal56068649560687698-1
ENSG00000178722C5orf646no signal560933535610475901
ENSG00000186105LRRC706no signal561874562618772751
ENSG00000186479RGS7BP6no signal563802084639081391
ENSG00000153015CWC276no signal564064757643145901
ENSG000002723706no signal564315865643163781
ENSG00000250732RPEP16no signal56454695464547611-1
ENSG000002532516no signal564920592649267181
ENSG000002516486no signal565028800650294811
ENSG00000153914SREK16no signal565435799654794431
ENSG000002513916no signal565594296656187721
ENSG000002537876no signal567485704674942351
ENSG00000250289VWA8P16no signal56815073768150912-1
ENSG000002122496no signal568169781681699141
ENSG000002493526no signal56826626668325992-1
ENSG00000145740SLC30A56no signal568389473684268961
ENSG00000134057CCNB16no signal568462837684740721
ENSG000002710456no signal568645763686462721
ENSG000002494307no signal5922661399781
ENSG00000153404PLEKHG4B7no signal51403731900851
ENSG00000164366CCDC1277no signal5196986218330-1
ENSG000002508487no signal5288948290436-1
ENSG000002142787no signal5403846404661-1
ENSG000002499087no signal5767512769046-1
ENSG00000247872SPCS2P37no signal58164618171161
ENSG000002723477no signal5100515410067381
ENSG000002504177no signal518560841856682-1
ENSG000002485977no signal519637231967268-1
ENSG000002010267no signal5218482421849341
ENSG00000215231LINC010207no signal5503447250701171
ENSG000002505297no signal550693055078424-1
ENSG000002508087no signal553960855396448-1
ENSG00000133398MED107no signal563719946378707-1
ENSG000002725207no signal5667121966744991
ENSG000002059767no signal572998877306705-1
ENSG00000078295ADCY27no signal5739632178301941
ENSG000002507617no signal577079157749879-1
ENSG00000124279FASTKD37no signal578592727869150-1
ENSG000002494867no signal581576548157901-1
ENSG000002497827no signal5852529185287911
ENSG000002501987no signal5883984488816371
ENSG000002500017no signal595199659523290-1
ENSG000002724177no signal51020371210204152-1
ENSG00000150756FAM173B7no signal51022644210250009-1
ENSG000002717157no signal51026960110270030-1
ENSG000002526717no signal510337389103374981
ENSG000002598027no signal51035281310353713-1
ENSG00000145495MARCH67no signal510353815104405001
ENSG000002141797no signal510541568105418071
ENSG000002649218no signal512599735125998121
ENSG000002514238no signal513860447138978801
ENSG00000250247SEPHS2P18no signal514960341149615021
ENSG00000183654MARCH118no signal51606724816180871-1
ENSG00000248403NACAP68no signal51619219716192818-1
ENSG000002718928no signal51710746917107898-1
ENSG00000252908RNU6-1003P8no signal517240720172408241
ENSG000001852968no signal517306490173070691
ENSG000002496628no signal517444119174840551
ENSG000002482058no signal51750215217502472-1
ENSG000002496208no signal51751194217512347-1
ENSG000002500558no signal517525344175259381
ENSG000002483378no signal51765448217654752-1
ENSG000002122788no signal518236232182363051
ENSG00000249191UBE2V1P128no signal51888673118887204-1
ENSG00000213430HSPD1P18no signal521882694218844211
ENSG000002492898no signal52332953623330001-1
ENSG000002485918no signal523456577234569591
ENSG000002264328no signal524170479241713551
ENSG000002506948no signal52435241824353552-1
ENSG000002486058no signal52540484225446034-1
ENSG000002264008no signal528927136289273911
ENSG000002483918no signal52938040329396088-1
ENSG00000169220RGS145no signal51767848381767996021
ENSG00000131183SLC34A15no signal51768062361768258491
ENSG000002724595no signal51769818251769823651
ENSG000002501015no signal51773666231774100551
ENSG00000113240CLK45no signal5178029665178057616-1
ENSG000002133285no signal5178336711178337610-1
ENSG00000264205RN7SL71P5no signal5178893834178894126-1
ENSG000002509996no signal51790847631790914331
ENSG00000204659CBY36no signal5179105584179107975-1
ENSG00000161021MAML16no signal51791598511792235121
ENSG00000221394MIR12296no signal5179225278179225346-1
ENSG000002494126no signal51793906151793914191
ENSG00000198995MIR3406no signal5179442303179442397-1
ENSG000002534806no signal5179512717179514038-1
ENSG000002297216no signal5179653378179654000-1
ENSG000002637596no signal51800094451800095301
ENSG000002492876no signal5180394189180397762-1
ENSG000002312286no signal51804092431804096111
ENSG00000146054TRIM76no signal5180620924180632293-1
ENSG000002485146no signal5180632361180633120-1
ENSG00000264732MIR46386no signal5180649566180649633-1
ENSG00000183718TRIM526no signal5180681417180688119-1
ENSG000002481256no signal51448094311448306621
ENSG00000156475PPP2R2B6no signal5145967936146464347-1
ENSG00000248568KRT8P486no signal5146085944146087163-1
ENSG00000169302STK32A6no signal51466145261467674151
ENSG00000176049JAKMIP26no signal5146967990147162338-1
ENSG000002495186no signal5147231207147232222-1
ENSG00000196800SPINK146no signal51475492961475549611
ENSG00000249834PGBD4P36no signal51476868611476878211
ENSG00000200161RN7SKP1456no signal5148495741148496043-1
ENSG00000269936MIR1456no signal51488098491488123971
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