Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

CTB-1 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 2.09
Chromosome Average Copy Number: 2.34

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
172768937728111490loss
172811904741609502no signal
11525555281525865774no signal
1617364041722no signal
153455290360141no signal
1903661490565083no signal
19060170547417672no signal
154745438553249602no signal
155325794727689172no signal
1741653961525551762no signal
11525865951559107082no signal
11559109862492243893no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000207181SNORA14B3no signal1235291118235291252-1
ENSG00000236863RPL23AP233no signal12354591802354596501
ENSG00000229795RPS21P13no signal12355963002355965461
ENSG00000235638MTND6P143no signal12357008202357013411
ENSG00000235674LDHAP23no signal12359013052359022891
ENSG00000222650RNU2-70P3no signal12364310802364312581
ENSG00000223776LGALS8-AS13no signal1236686369236687808-1
ENSG00000119285HEATR13no signal1236712305236767804-1
ENSG000002321543no signal1238111317238112443-1
ENSG00000225723MTND6P153no signal12381125142381130341
ENSG00000224783MIPEPP23no signal1238940349238942500-1
ENSG000002319793no signal1240078739240080255-1
ENSG000002260143no signal1240713167240713678-1
ENSG000002314403no signal1240751822240754048-1
ENSG00000233615HNRNPA1P423no signal12410829532410839091
ENSG000002380853no signal1241161751241162094-1
ENSG00000196289BECN1P13no signal12421210392421223641
ENSG00000197769MAP1LC3C3no signal1242158792242162375-1
ENSG00000222120RNA5SP813no signal12422975742422976831
ENSG00000054282SDCCAG83no signal12434193202436633941
ENSG000002321843no signal1243866159243904123-1
ENSG000002299603no signal1244232122244256328-1
ENSG00000252282RNU6-1089P3no signal12451863172451864201
ENSG00000225222CHCHD4P53no signal12463420802463425061
ENSG000002350213no signal12468533492468551231
ENSG00000143653SCCPDH3no signal12468873492469314391
ENSG000002020793no signal12474581372474582431
ENSG00000232215OR2L6P3no signal12481664312481673701
ENSG000002000853no signal12481924222481925231
ENSG00000171180OR2M43no signal12484022312484031661
ENSG00000196944OR2T43no signal12485248832485259291
ENSG00000227152OR2T73no signal12486045082486054341
ENSG00000196240OR2T23no signal12486160772486171301
ENSG00000182783OR2T293no signal1248721784248722797-1
ENSG00000266949LYPD83no signal1248902716248903150-1
ENSG00000175137SH3BP5L3no signal1249104648249120832-1
ENSG000002253383no signal1212482393212482860-1
ENSG000002280673no signal12127190362127294071
ENSG00000264590RN7SL512P3no signal1212789050212789295-1
ENSG000002260363no signal12128206382128210971
ENSG000002351823no signal12130266222130267681
ENSG00000162769FLVCR13no signal12130315972130727051
ENSG000002282553no signal12139047592139679301
ENSG00000117724CENPF3no signal12147765382148379311
ENSG00000136636KCTD33no signal12157407352157951491
ENSG00000234070SPATA17-AS13no signal1217954540217958462-1
ENSG00000231814LINC002103no signal12180662422180941461
ENSG000002307143no signal12182051772182070021
ENSG00000215817ZC3H11B3no signal1219782859219786462-1
ENSG000002216733no signal12201360282201362061
ENSG00000162813BPNT13no signal1220230824220263804-1
ENSG00000067704IARS23no signal12202674442203213801
ENSG00000116141MARK13no signal12207015682208378031
ENSG00000117791MARC23no signal12209215672209581501
ENSG00000221571RNU6ATAC35P3no signal12209989622209993891
ENSG000002380783no signal12210025972210057711
ENSG00000136630HLX3no signal12210516992210584011
ENSG00000234419CICP133no signal12226414362226442241
ENSG00000197520FAM177B3no signal12229105492229241471
ENSG000002266013no signal12233544862233614961
ENSG00000143514TP53BP23no signal1223967601224033674-1
ENSG00000188460ACTBP113no signal1224051428224052553-1
ENSG000002430003no signal12241835972241913561
ENSG00000252484RN7SKP493no signal1224294984224295243-1
ENSG000002367733no signal1224363178224363408-1
ENSG000002018983no signal12243673432243674691
ENSG00000266618MIR47423no signal1224585929224586013-1
ENSG00000143786CNIH33no signal12246223622249282511
ENSG000002333843no signal1224802998224803922-1
ENSG00000185842DNAH143no signal12250839642255869961
ENSG00000223306RNU6-1304P3no signal12259289772259290841
ENSG00000243709LEFTY13no signal1226073982226099082-1
ENSG00000143811PYCR23no signal1226107578226111978-1
ENSG00000183814LIN93no signal1226418850226497570-1
ENSG00000236994YBX1P93no signal1226505716226506394-1
ENSG00000143799PARP13no signal1226548392226595780-1
ENSG00000177770CDKN2AIPNLP13no signal1226680889226681190-1
ENSG00000143740SNAP473no signal12279162402279689271
ENSG00000233003CICP263no signal1228162980228165894-1
ENSG00000181873IBA573no signal12283535162283699581
ENSG000002700943no signal12285819912285846681
ENSG00000199337RNA5S33no signal1228750497228750615-1
ENSG00000168118RAB4A3no signal12294068222294416411
ENSG00000143632ACTA13no signal1229566992229569845-1
ENSG00000135776ABCB103no signal1229652329229694442-1
ENSG000002280583no signal12301384772301429091
ENSG00000119280C1orf1983no signal1230972865231005335-1
ENSG000002233933no signal12310105922310147611
ENSG000002389853no signal1231031178231031250-1
ENSG00000223982SNRPD2P23no signal1231611702231612034-1
ENSG00000229228LINC005823no signal1231727038231747836-1
ENSG00000226758DISC1-IT13no signal12320615802320809791
ENSG000002363723no signal1232310678232315859-1
ENSG00000242794RN7SL299P3no signal12323586122323588911
ENSG000002364973no signal1232863000232878461-1
ENSG00000206835RNU1-74P3no signal1232967763232967933-1
ENSG00000265744MIR44273no signal12337598982337599651
ENSG00000236101RAC1P73no signal1234162597234162973-1
ENSG000002317683no signal1234663637234667525-1
ENSG000002414753no signal12347960172348028501
ENSG00000224040HMGN1P43no signal1182911250182911539-1
ENSG000002275543no signal1183723553183724072-1
ENSG000002527903no signal11846470681846471411
ENSG000002280123no signal1187505233187505431-1
ENSG000001507323no signal1188036429188036656-1
ENSG000002711873no signal1191148651191148869-1
ENSG000002338823no signal1191190289191197597-1
ENSG00000127074RGS133no signal11926052751926293901
ENSG00000231767MIR44263no signal11926853131926857831
ENSG000002725793no signal1193059996193060686-1
ENSG00000134371CDC733no signal11930911471932230311
ENSG00000221680MIR12783no signal11931056331931057131
ENSG00000162687KCNT23no signal1196194909196578355-1
ENSG00000116785CFHR33no signal11967439251967632031
ENSG000002285303no signal11998461061998466861
ENSG00000202491RNU6-716P3no signal1199977633199977735-1
ENSG00000118193KIF143no signal1200520628200589862-1
ENSG00000118197DDX593no signal1200593024200639097-1
ENSG000002600883no signal12006386352006633781
ENSG00000201032RNU6-704P3no signal1200902473200902575-1
ENSG00000174307PHLDA33no signal1201434620201438365-1
ENSG00000159176CSRP13no signal1201452658201478584-1
ENSG000002363903no signal1201642233201643272-1
ENSG00000200942RNU6-501P3no signal12017025342017026331
ENSG000002346783no signal1201969222201979481-1
ENSG00000143858SYT23no signal1202559724202679545-1
ENSG000002268623no signal12025733962025744211
ENSG00000117139KDM5B3no signal1202696526202778598-1
ENSG000001994713no signal1202884008202884108-1
ENSG00000143847PPFIA43no signal12029956262030478681
ENSG000002246713no signal1203113092203122028-1
ENSG00000188783PRELP3no signal12034449562034604801
ENSG00000058673ZC3H11A3no signal12037647822038232521
ENSG00000182004SNRPE3no signal12038307312038396781
ENSG000002610653no signal12041001902041010941
ENSG000002316913no signal12042461332042470761
ENSG000002529463no signal1204873875204873946-1
ENSG000002715803no signal12050602912050610741
ENSG00000133069TMCC23no signal12051973042052424711
ENSG00000162873KLHDC8A3no signal1205305220205326218-1
ENSG00000226235LEMD1-AS13no signal12053423802053565681
ENSG00000186007LEMD13no signal1205350506205425082-1
ENSG00000196550FAM72A3no signal12061369162061551511
ENSG000002407543no signal1206288156206306131-1
ENSG00000136653RASSF53no signal12066808792067626161
ENSG00000143486EIF2D3no signal1206744620206785904-1
ENSG000002716803no signal12070792732070797381
ENSG00000182795C1orf1163no signal1207191866207206101-1
ENSG00000123838C4BPA3no signal12072776072073183171
ENSG00000197721CR1L3no signal12078184582079117611
ENSG000002342193no signal12079359292079366081
ENSG00000203709C1orf1323no signal1207974863208042495-1
ENSG000002268433no signal1208428635208428721-1
ENSG000002614533no signal1208780445208785537-1
ENSG00000225712ATP5G2P13no signal1209441143209441568-1
ENSG000002242603no signal1209701800209741018-1
ENSG00000008118CAMK1G3no signal12097570622097872831
ENSG00000264831MIR42603no signal1209796789209796855-1
ENSG00000117594HSD11B13no signal12098595102099082951
ENSG000002613143no signal1211756357211757067-1
ENSG000002220803no signal1211826798211826891-1
ENSG00000117650NEK23no signal1211836114211848960-1
ENSG00000143493INTS73no signal1212113741212208884-1
ENSG000002300633no signal12124707902124729211
ENSG00000018625ATP1A23no signal11600855491601133811
ENSG00000162734PEA153no signal11601751271601851661
ENSG00000235082SUMO1P33no signal11602871931602874961
ENSG00000171786NHLH13no signal11603368571603426381
ENSG00000066294CD843no signal1160510885160549306-1
ENSG000002642863no signal1160515438160515535-1
ENSG000002288633no signal11606405681606536981
ENSG000002130803no signal11608647701608658661
ENSG000002701493no signal1160967747161008752-1
ENSG00000158874APOA23no signal1161192082161193421-1
ENSG00000143252SDHC3no signal11612840471613329841
ENSG00000143226FCGR2A3no signal11614752201614938031
ENSG000002245153no signal1161526080161526868-1
ENSG00000241347RN7SL466P3no signal11617055981617058891
ENSG00000118217ATF63no signal11617360841619338601
ENSG000002270943no signal1162286642162287584-1
ENSG00000212527RNA5SP633no signal11634792741634793851
ENSG000002254873no signal1164890555164890866-1
ENSG000002247023no signal11651798641651823271
ENSG000002380223no signal11651852171651883411
ENSG00000143171RXRG3no signal1165370159165414433-1
ENSG000002069903no signal1165631822165631924-1
ENSG000002158353no signal1166244866166246834-1
ENSG000002722053no signal1167189068167189749-1
ENSG000002334113no signal1167426620167427898-1
ENSG000002310293no signal11675606291675610831
ENSG000002416663no signal1167596622167599911-1
ENSG00000143147GPR1613no signal1168053997168106821-1
ENSG00000143155TIPRL3no signal11681481711681699501
ENSG00000237049RPL34P13no signal11681798541681802071
ENSG00000213064SFT2D23no signal11681951761682222631
ENSG000002277223no signal11683382921683388391
ENSG00000143184XCL13no signal11685457111685513151
ENSG00000143156NME73no signal1169101769169337205-1
ENSG000002032603no signal1169990599169991390-1
ENSG000002353033no signal11705679951706164801
ENSG000002066923no signal1171223045171223161-1
ENSG00000034971MYOC3no signal1171604557171621823-1
ENSG00000230364RPL4P33no signal1171652268171653578-1
ENSG00000010165METTL133no signal11717507881717831631
ENSG00000208317SNORD783no signal1173834760173834824-1
ENSG00000252231RNA5SP673no signal11738902081738903381
ENSG00000236535RC3H1-IT13no signal1173978405173985344-1
ENSG000002388723no signal1174169267174169368-1
ENSG00000116147TNR3no signal1175284330175712906-1
ENSG000002324633no signal1176200336176200966-1
ENSG00000152092ASTN13no signal1176826438177134109-1
ENSG000002275793no signal1177362423177566844-1
ENSG00000075391RASAL23no signal11780628641784486441
ENSG000001849093no signal11785119501785175791
ENSG00000201347RNA5SP693no signal11785300481785301641
ENSG000002730623no signal1178693441178695420-1
ENSG00000116194ANGPTL13no signal1178818840178840187-1
ENSG00000116199FAM20B3no signal11789949391790456971
ENSG000002327503no signal1179004444179004787-1
ENSG00000231564EIF4A1P113no signal11791708401791710611
ENSG000002319663no signal1179798744179805259-1
ENSG00000169905TOR1AIP23no signal1179809102179846938-1
ENSG000002351453no signal11799378211799386411
ENSG000002431553no signal1180913178180945618-1
ENSG000001794523no signal11812055241812077401
ENSG00000222397RN7SKP2293no signal1181808608181808909-1
ENSG000002286643no signal11822976321822981421
ENSG00000135838NPL3no signal11827584281827995191
ENSG00000183558HIST2H2AA32no signal1149813505149814478-1
ENSG00000184260HIST2H2AC2no signal11498585251498589611
ENSG00000014914MTMR112no signal1149900543149908791-1
ENSG00000136631VPS452no signal11500393691501175051
ENSG000002385262no signal11502340931502341961
ENSG00000118292C1orf542no signal11502406001502533271
ENSG00000163125RPRD22no signal11503355671504490421
ENSG00000264553MIR42572no signal11505244051505244901
ENSG00000143387CTSK2no signal1150768684150780799-1
ENSG00000143409FAM63A2no signal1150969025150980851-1
ENSG00000143458GABPB22no signal11510430541510980181
ENSG000002611682no signal1151102551151104086-1
ENSG00000143434SEMA6C2no signal1151104161151119104-1
ENSG00000143398PIP5K1A2no signal11511704251512220121
ENSG000002379762no signal11513194431513205031
ENSG000002325362no signal11515129921515343311
ENSG00000143376SNX272no signal11515845411516715671
ENSG00000206635RNU6-1062P2no signal11516018001516019061
ENSG00000182134TDRKH2no signal1151742583151763892-1
ENSG00000229021NBPF18P2no signal11519670071520152501
ENSG00000163191S100A112no signal1152004982152020383-1
ENSG00000143631FLG2no signal1152274651152297679-1
ENSG00000187223LCE2D2no signal11526358721526371351
ENSG00000198854C1orf682no signal11526919981526929051
ENSG00000240386LCE1F2no signal11527488481527494451
ENSG00000235942LCE6A2no signal11528153441528164591
ENSG00000163207IVL2no signal11528810211528843621
ENSG00000159516SPRR2G2no signal1153122058153123345-1
ENSG00000203784LELP12no signal11531759191531775961
ENSG000002382792no signal11535060791535075911
ENSG00000196754S100A22no signal1153533584153540366-1
ENSG00000143621ILF22no signal1153634512153643524-1
ENSG000002385112no signal1153726600153726703-1
ENSG000002526692no signal1153970517153970627-1
ENSG000002362632no signal1155180942155183610-1
ENSG000002161092no signal1155206540155206628-1
ENSG00000116521SCAMP32no signal1155225770155232221-1
ENSG00000160753RUSC12no signal11552906871553009051
ENSG000002388052no signal1155385349155385453-1
ENSG00000225082DAP3P12no signal11555564351555719881
ENSG00000132676DAP32no signal11556577511557088011
ENSG000002276732no signal1155679889155680354-1
ENSG00000132718SYT112no signal11558293001558549901
ENSG00000201614RNU4-19P2no signal11558640721558641771
ENSG00000116584ARHGEF23no signal1155916630155976861-1
ENSG00000116586LAMTOR23no signal11560245431560283011
ENSG00000163468CCT33no signal1156278759156337664-1
ENSG000002281553no signal11562933021562934871
ENSG000002388433no signal11564991221564992211
ENSG000002375883no signal1156657487156661789-1
ENSG00000143320CRABP23no signal1156669398156675608-1
ENSG00000143294PRCC3no signal11567204021567706071
ENSG000002299613no signal11571551781571571951
ENSG000002272173no signal11576615521576662491
ENSG000002317003no signal11576788761576794331
ENSG00000163534FCRL13no signal1157764193157789895-1
ENSG000002316663no signal1158101834158110429-1
ENSG00000158477CD1A3no signal11582239271582280591
ENSG00000163554SPTA13no signal1158580496158656488-1
ENSG00000203757OR6K33no signal1158686958158687953-1
ENSG000002256703no signal1159165775159177763-1
ENSG00000213088DARC3no signal11591730971591762901
ENSG00000196266OR10J33no signal1159283460159284449-1
ENSG00000162723SLAMF93no signal1159921282159924044-1
ENSG00000134243SORT12no signal1109852192109940573-1
ENSG00000065135GNAI32no signal11100912331101369751
ENSG000002417202no signal11102684421103178741
ENSG00000197106SLC6A172no signal11106931081107448241
ENSG00000224699LAMTOR5-AS12no signal11109254411109749821
ENSG000002616542no signal1111478991111484975-1
ENSG00000231346LINC011602no signal1112142277112151345-1
ENSG00000171385KCND32no signal1112313284112531777-1
ENSG000002391112no signal11127381241127382281
ENSG00000134245WNT2B2no signal11130091631130727871
ENSG00000007341ST7L2no signal1113066140113163447-1
ENSG00000237278RLIMP22no signal1113667943113669505-1
ENSG00000081026MAGI32no signal11139333711142285451
ENSG000002707802no signal1114544055114544857-1
ENSG00000175984DENND2C2no signal1115125469115213043-1
ENSG00000116748AMPD12no signal1115215719115238239-1
ENSG000002019002no signal11152703411152704451
ENSG00000134198TSPAN22no signal1115590632115632121-1
ENSG000002269732no signal11160145621160186481
ENSG000002075022no signal1116164493116164626-1
ENSG000002210402no signal11168212281168214421
ENSG000002692792no signal1116915890116926718-1
ENSG000002331542no signal1116966346117021464-1
ENSG000002249502no signal1117035645117041834-1
ENSG00000116815CD582no signal1117057157117113661-1
ENSG000002714272no signal1117907521117908095-1
ENSG000002386792no signal11198016641198017641
ENSG000002277122no signal1119802888119869926-1
ENSG00000116882HAO22no signal11199114021199367531
ENSG00000230921HAO2-IT12no signal11199115691199129541
ENSG00000203859HSD3B22no signal11199575541199656581
ENSG000002327802no signal1119977079119977703-1
ENSG00000226443GAPDHP322no signal1120076372120077369-1
ENSG00000249798HSD3BP32no signal11200811321200885361
ENSG00000240244GAPDHP332no signal1120138790120139802-1
ENSG000002330292no signal11209256341209330001
ENSG00000198019FCGR1B2no signal1120926979120935937-1
ENSG000002308062no signal1121102017121140666-1
ENSG000002654662no signal11426560621426561441
ENSG000002360552no signal1142790583142791175-1
ENSG00000232745ANKRD20A14P2no signal11428035321428272351
ENSG000002308502no signal11431190611432334171
ENSG000002346542no signal11432458231432462101
ENSG00000236334PPIAL4G2no signal1143767144143767881-1
ENSG00000215784FAM72D2no signal1143896452143913143-1
ENSG00000235398LINC006232no signal1144275918144341756-1
ENSG00000201699RNU1-59P2no signal11445340381445341991
ENSG000002158612no signal1144676874144679969-1
ENSG00000181039ANKRD34A2no signal11454705081454756461
ENSG00000152022LIX1L2no signal11454770851455016691
ENSG00000117262GPR89A2no signal1145764411145827103-1
ENSG000002357022no signal11458272051458331181
ENSG00000152042NBPF112no signal1146032647146082765-1
ENSG00000180867PDIA3P12no signal11466496921466512061
ENSG00000143140GJA52no signal1147228332147245484-1
ENSG00000121634GJA82no signal11473749461473813931
ENSG00000238677RNA5SP582no signal11476659931476661151
ENSG000002527442no signal11478023961478025191
ENSG00000256374PPIAL4D2no signal1148201752148202536-1
ENSG000002290022no signal11485428731485451281
ENSG00000230582PPIAL4F2no signal11488060151488067991
ENSG00000203817FAM72C2no signal1149438750149459549-1
ENSG000002342322no signal1149649060149719362-1
ENSG00000183598HIST2H3D2no signal1149784826149785236-1
ENSG00000201487SNORD45B2no signal176255162762552331
ENSG000002668322no signal176308317763084021
ENSG00000184005ST6GALNAC32no signal176540404771002861
ENSG00000251767RNU7-8P2no signal177886010778860711
ENSG00000243437RN7SL370P2no signal178111009781113011
ENSG000002135602no signal178557183785577381
ENSG00000236407HMGB1P182no signal180749037807496551
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