Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

CCRF-CEM - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 1.98
Chromosome Average Copy Number: 2

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
X119805547321592no signal
X54732550573821692no signal
X57383730715513222no signal
X71552036751859172no signal
X751872211074008392no signal
X1074024081088217512no signal
X1088229271253711642no signal
X1253712581266622002no signal
X1266680821269189091no signal
X1269196761277205002no signal
X1277209181326767272no signal
X1326825161331287303no signal
X1331294181551823552no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG000002383272no signalX2352532823525430-1
ENSG00000165186PTCHD12no signalX23352133234224891
ENSG00000184735DDX532no signalX23018087230202041
ENSG000002330672no signalX2227791423311263-1
ENSG00000265868RN7SL436P2no signalX2207227122072551-1
ENSG00000012174MBTPS22no signalX21857754219035421
ENSG00000149970CNKSR22no signalX21392536216728131
ENSG00000224224HAUS1P22no signalX18883889188846721
ENSG00000086717PPEF12no signalX18694029188460391
ENSG00000102104RS12no signalX1865803018690229-1
ENSG00000230020NHS-AS12no signalX1757047017575508-1
ENSG000002358342no signalX17546558176052811
ENSG000001994102no signalX1693033816930440-1
ENSG00000239333RN7SL658P2no signalX1655726216557562-1
ENSG00000215313RPL6P302no signalX1621655116217412-1
ENSG00000200566RNU5F-7P2no signalX1593431215934426-1
ENSG00000123595RAB9A2no signalX13707244137286251
ENSG00000233338TLR8-AS12no signalX1292093612926452-1
ENSG00000230691MRPL35P42no signalX1286298412863549-1
ENSG00000047648ARHGAP62no signalX1113623911683821-1
ENSG000002153192no signalX97862799787509-1
ENSG00000101849TBL1X2no signalX943133596877801
ENSG000002303942no signalX797541979862011
ENSG00000169059VCX3A2no signalX64516596453159-1
ENSG000002056622no signalX38479103855896-1
ENSG00000236188PRKX-AS12no signalX357752835862331
ENSG00000207435RNU6-114P2no signalX349089834910021
ENSG00000062096ARSF2no signalX295951230307671
ENSG00000230542LINC001022no signalX25310292533388-1
ENSG00000236871LINC001062no signalX151532015182951
ENSG00000226179LINC006852no signalX2817252825861
ENSG000002309262no signalX50825664508340741
ENSG000002652112no signalX50388118503882091
ENSG00000207768MIR1882no signalX49768109497681941
ENSG00000207758MIR5322no signalX49767754497678441
ENSG00000237671GAGE12C2no signalX49296814493041411
ENSG00000231850GAGE2B2no signalX49235708492429971
ENSG00000240257GAGE2D2no signalX49207160492144201
ENSG00000215274GAGE102no signalX49160148491763231
ENSG000002668132no signalX4905970249059788-1
ENSG00000102007PLP22no signalX49028273490315881
ENSG00000017621MAGIX2no signalX49019061490248221
ENSG00000102057KCND12no signalX4881863948827976-1
ENSG00000220125MRPL32P12no signalX4844148148441727-1
ENSG000002046202no signalX4843148248433275-1
ENSG000002353502no signalX48291580482999981
ENSG000002250552no signalX48216560482189301
ENSG000002707472no signalX4819633448196604-1
ENSG000002343912no signalX48166204481684901
ENSG000002331392no signalX4801329648015369-1
ENSG00000171478SPACA5B2no signalX47990039479919951
ENSG000002384732no signalX47941136479412391
ENSG00000224401RPL7P572no signalX4770036247701101-1
ENSG00000263858MIR47692no signalX47446828474469041
ENSG000002387292no signalX47138526471386291
ENSG00000102225CDK162no signalX47077259470893961
ENSG00000213997PGAM1P72no signalX4650602946506765-1
ENSG000002294912no signalX45042496451931621
ENSG00000147050KDM6A2no signalX44732757449718471
ENSG00000229168RPL19P202no signalX44508375445089651
ENSG000002240542no signalX44325937443282011
ENSG00000183690EFHC22no signalX4400712844202918-1
ENSG00000069535MAOB2no signalX4362585843741693-1
ENSG00000102055PPP1R2P92no signalX4263672242637330-1
ENSG00000228847ATP5G2P42no signalX4195800741958426-1
ENSG00000171659GPR342no signalX41548226415565261
ENSG000002699412no signalX41092886410935361
ENSG000002379312no signalX40936252409370031
ENSG00000182220ATP6AP22no signalX40440146404658891
ENSG00000183337BCOR2no signalX3990906840036582-1
ENSG000002234862no signalX39868529398714351
ENSG000002520502no signalX3816736538167494-1
ENSG00000174678FAM47DP2no signalX3740033037404515-1
ENSG000002217292no signalX36595470365955651
ENSG00000206733RNU6-641P2no signalX3604005636040162-1
ENSG00000189132FAM47B2no signalX34960913349630341
ENSG000002360722no signalX34405839344065811
ENSG00000235512TAB3-AS22no signalX30872438308728241
ENSG00000157625TAB32no signalX3084555930993201-1
ENSG00000227592PIGFP32no signalX3003527730035998-1
ENSG00000264090MIR4666B2no signalX29592395295924751
ENSG000002635092no signalX2839508028395178-1
ENSG000002245892no signalX2791146527912176-1
ENSG000002328342no signalX2786570527866056-1
ENSG00000177689MAGEB102no signalX27826107278411311
ENSG000002313152no signalX27765013277669081
ENSG00000189186DCAF8L22no signalX27608499277669081
ENSG000002382472no signalX27536001275378761
ENSG000002338072no signalX2723624827236795-1
ENSG000002642242no signalX24716239247163081
ENSG00000223611SUPT20HL22no signalX2432897924331432-1
ENSG00000165182CXorf582no signalX23925918239576241
ENSG00000184831APOO2no signalX2385147023926057-1
ENSG000002022722no signalX23800327238004271
ENSG00000123130ACOT92no signalX2372037023784592-1
ENSG00000102290PCDH11X2no signalX91034260918782291
ENSG00000226081USP12PX2no signalX89367649893687051
ENSG000002275812no signalX8929421289294833-1
ENSG000002309562no signalX8735139487352226-1
ENSG00000102271KLHL42no signalX86772752869250501
ENSG000001995672no signalX85274612852747191
ENSG000002237072no signalX8510441585105144-1
ENSG00000215102TERF1P42no signalX8300383383004947-1
ENSG000002318752no signalX80618767806196691
ENSG000002643742no signalX80496319804964001
ENSG00000215104CHMP1B2P2no signalX7952883079565669-1
ENSG00000122145TBX222no signalX79270255792872681
ENSG00000187325TAF9B2no signalX7738524577395203-1
ENSG000002354472no signalX7587589975876960-1
ENSG00000186675MAGEE22no signalX7500282375005079-1
ENSG00000199601RNU6-562P2no signalX74422538744226441
ENSG000002296612no signalX74421326744216251
ENSG000002715892no signalX73989474739896331
ENSG000002265152no signalX7356254873562695-1
ENSG00000232928DDX3YP12no signalX73340847733517581
ENSG00000159123DMRTC12no signalX7209185972163653-1
ENSG00000201271RNU1-112P2no signalX7196053071960693-1
ENSG00000231944PHKA1-AS12no signalX71908800719321901
ENSG00000198034RPS4X2no signalX7147552971497150-1
ENSG00000264396RN7SL264P2no signalX7144309471443403-1
ENSG00000215113CXorf49B2no signalX70983140709870541
ENSG000002309342no signalX70911782709120291
ENSG000002151202no signalX7074766470750075-1
ENSG000001997512no signalX7071091670711017-1
ENSG000002242082no signalX7053476270535729-1
ENSG00000147130ZMYM32no signalX7045947470474996-1
ENSG000002137472no signalX70077013700773521
ENSG00000147127RAB412no signalX69501943695048521
ENSG00000220925IGBP1-AS22no signalX6936843269369504-1
ENSG00000235382MTND4P312no signalX6934482269348921-1
ENSG00000147160AWAT22no signalX6926039269269788-1
ENSG00000172186HMGN1P352no signalX68393967683945601
ENSG00000090776EFNB12no signalX68048840680619901
ENSG00000213740SERBP1P12no signalX68003315680049091
ENSG00000236735RPL31P632no signalX67819926678203151
ENSG00000131080EDA2R2no signalX6581547965859108-1
ENSG00000089472HEPH2no signalX65382391654887091
ENSG00000227942FRMD8P12no signalX6477077864772301-1
ENSG00000225814GRPEL2P22no signalX6391775863918427-1
ENSG00000198881ASB122no signalX6344407663450511-1
ENSG000002260102no signalX6336475263366932-1
ENSG00000234570ZFRP12no signalX6209828162104312-1
ENSG00000228004MYCLP22no signalX5796027157961237-1
ENSG00000147059SPIN2A2no signalX5716096357164058-1
ENSG00000186787SPIN2B2no signalX5714498457147980-1
ENSG000002297602no signalX5520464055205170-1
ENSG00000238269PAGE2B2no signalX55101496551053421
ENSG00000102302FGD12no signalX5447188754522599-1
ENSG000002261102no signalX5379548453795717-1
ENSG00000072506HSD17B102no signalX5345820653461320-1
ENSG00000184205TSPYL22no signalX53111549531177221
ENSG00000171405XAGE52no signalX52841228528473251
ENSG00000204363SPANXN52no signalX5282518452827141-1
ENSG000002276282no signalX5233385752334578-1
ENSG00000187243MAGED4B2no signalX5180492351812368-1
ENSG000002375282no signalX51666648516668361
ENSG00000223591CENPVP12no signalX51453887514552271
ENSG00000187690CXorf672no signalX51149767511516871
ENSG000002265302no signalX51139363512085131
ENSG00000101883RHOXF12no signalX119243011119249847-1
ENSG000002585452no signalX1191702011192807601
ENSG00000018610CXorf562no signalX118672112118699397-1
ENSG00000227814MRPS17P92no signalX1185136751185140671
ENSG000002266612no signalX118490264118527558-1
ENSG000002706252no signalX118356527118357208-1
ENSG00000175556LONRF32no signalX1181085811181523181
ENSG00000174460ZCCHC122no signalX1179577531179609311
ENSG00000131724IL13RA12no signalX1178615351179285021
ENSG00000131725WDR442no signalX1174800361175839241
ENSG000002706192no signalX1174121221174173301
ENSG000002360772no signalX115803778115814271-1
ENSG000002352442no signalX115033604115085422-1
ENSG00000234785EEF1GP52no signalX1149371311149384401
ENSG000002718262no signalX114752490114797058-1
ENSG000002122412no signalX114373593114373686-1
ENSG000002719072no signalX114360879114361007-1
ENSG00000123496IL13RA22no signalX114238538114254540-1
ENSG00000147246HTR2C2no signalX1138185511141446241
ENSG000002305022no signalX113623441113623608-1
ENSG000002004362no signalX1119048851119049961
ENSG00000204025TRPC5OS2no signalX1111251251111472181
ENSG00000072315TRPC52no signalX111017543111326004-1
ENSG00000229487ALG13-AS12no signalX110949877110954329-1
ENSG00000225031EIF4BP72no signalX110862905110864717-1
ENSG00000223904HMGB1P122no signalX1106776551106782521
ENSG00000133136GNG5P22no signalX109589700109590201-1
ENSG000002269582no signalX108297361108297792-1
ENSG000001893722no signalX1076266281076272231
ENSG00000101843PSMD102no signalX107327437107334848-1
ENSG00000101842VSIG12no signalX1072882001073224141
ENSG00000157502MUM1L12no signalX1054122981054529491
ENSG00000206864RNU6-207P2no signalX104920064104920170-1
ENSG00000123575FAM199X2no signalX1034113011034405831
ENSG00000227067DPPA3P12no signalX103216382103216864-1
ENSG000002608312no signalX1031976291032021121
ENSG000002317872no signalX103159243103159675-1
ENSG00000172476RAB40A2no signalX102754678102774417-1
ENSG000002380492no signalX102602390102602657-1
ENSG00000147206NXF32no signalX102330738102348157-1
ENSG000002376282no signalX1020524591020530561
ENSG00000198908BHLHB92no signalX1019756161020084681
ENSG00000198932GPRASP12no signalX1019062941019140111
ENSG000002700502no signalX101854585101914640-1
ENSG000002711472no signalX1018544401019695991
ENSG00000125962ARMCX52no signalX1018540961018590871
ENSG00000228275ARMCX3-AS12no signalX100877973100879154-1
ENSG000002040722no signalX1008524881008536491
ENSG000002211322no signalX100682381100682483-1
ENSG00000202024RNU6-934P2no signalX1005803921005804981
ENSG00000188917TRMT2B2no signalX100264335100307105-1
ENSG00000174225ARL13A2no signalX1002246971002458181
ENSG00000000005TNMD2no signalX99839799998548821
ENSG000002522962no signalX99355082993552191
ENSG000002299462no signalX9914173899142689-1
ENSG00000226837HMGB1P322no signalX97677136976778071
ENSG00000213704EEF1A1P152no signalX97644510976459171
ENSG000002713222no signalX9760344997603746-1
ENSG000002712092no signalX9559223595592911-1
ENSG000002150852no signalX94839302948399411
ENSG00000201567RNA5SP5102no signalX94837063948371611
ENSG00000231001CCNB1IP1P32no signalX9403173894032566-1
ENSG000002275212no signalX93574037935750241
ENSG00000234702VDAC1P32no signalX9123765491238504-1
ENSG00000207969MIR5072no signalX146312502146312595-1
ENSG00000207984MIR513A22no signalX146307344146307470-1
ENSG000002316862no signalX145701115145702102-1
ENSG000002347482no signalX1456190531456195661
ENSG00000216064MIR891B2no signalX145082571145082649-1
ENSG000002522192no signalX145074271145074343-1
ENSG00000189252SPANXN32no signalX142596564142605303-1
ENSG000002273032no signalX1423727541426046311
ENSG00000199878RN7SKP1492no signalX142285034142285377-1
ENSG000002506252no signalX141282138141283276-1
ENSG000002234382no signalX1407139941407148631
ENSG00000182195LDOC12no signalX140269934140271310-1
ENSG000002306682no signalX139763271139769870-1
ENSG000002311102no signalX139298187139298956-1
ENSG00000173954SNURFL2no signalX1384441991384445411
ENSG00000129682FGF132no signalX137713735138304939-1
ENSG00000183981MAGEA13P2no signalX1375649031375659551
ENSG000002147482no signalX136407131136407208-1
ENSG00000165370GPR1012no signalX136112307136113833-1
ENSG000002323792no signalX136029907136030292-1
ENSG000002340622no signalX1359915541361037891
ENSG00000252320RNU6-320P2no signalX1356653991356655041
ENSG000002300792no signalX135377849135382457-1
ENSG00000198689SLC9A62no signalX1350675981351294231
ENSG00000226907CT45A62no signalX134962849134971244-1
ENSG000001980222no signalX134807306134819866-1
ENSG00000225235DDX26B-AS12no signalX134654008134654599-1
ENSG000002382102no signalX1343865241343875311
ENSG000002561822no signalX1342571681342575281
ENSG00000196972LINC000872no signalX134229058134232664-1
ENSG000002358132no signalX1337334871337402841
ENSG00000156531PHF62no signalX1335072831335628201
ENSG00000239594MIR18B2no signalX133304064133304146-1
ENSG00000207812MIR19B22no signalX133303701133303797-1
ENSG000002654712no signalX1324253211324253991
ENSG000002071002no signalX1322867821322869201
ENSG00000235849HS6ST2-AS12no signalX1318016701318039161
ENSG00000206900RNU6-98P2no signalX131714145131714251-1
ENSG000002351902no signalX1310716981310718811
ENSG000002309732no signalX130571029130571644-1
ENSG00000147255IGSF12no signalX130407480130533677-1
ENSG00000237650OR11Q1P2no signalX1303381021303389781
ENSG00000241198RN7SL191P2no signalX130268062130268364-1
ENSG000002286592no signalX130115564130192120-1
ENSG00000122122SASH32no signalX1289139551289291771
ENSG00000122126OCRL2no signalX1286738261287265381
ENSG00000201518RNA5SP5132no signalX128570507128570624-1
ENSG00000218728KRT18P442no signalX1278484841278497681
ENSG000002352392no signalX127261068127262190-1
ENSG000002264142no signalX1258630871258642091
ENSG00000231501MTND4LP12no signalX1256067111256068671
ENSG00000232149FERP12no signalX1227369901227377821
ENSG00000125676THOC22no signalX122734412122866906-1
ENSG000002297332no signalX1226922011226924351
ENSG000002213172no signalX121605578121605671-1
ENSG000002212172no signalX1210027201210028091
ENSG000002703972no signalX1200861981200864491
ENSG00000224089CT47A102no signalX120072561120075873-1
ENSG000002706782no signalX1200667551200670061
ENSG000001815112no signalX1198669481198672501
ENSG00000232119MCTS12no signalX1197278651197549291
ENSG00000158290CUL4B2no signalX119658464119709649-1
ENSG00000125355TMEM255A2no signalX119392505119445411-1
ENSG000002275412no signalX119335910119336597-1
ENSG00000168939SPRY32no signalX1549974741550121211
ENSG000002253932no signalX1546979471547167071
ENSG00000185515BRCC32no signalX1542996951543513491
ENSG00000214827MTCP12no signalX154289897154376212-1
ENSG00000203870SMIM92no signalX154051623154062937-1
ENSG00000130826DKC12no signalX1539910311540059641
ENSG00000237619OR3B1P2no signalX153887064153887956-1
ENSG00000213338ATF4P12no signalX153850679153851751-1
ENSG00000231342ATF4P22no signalX1538091891538102611
ENSG00000160211G6PD2no signalX153759606153775787-1
ENSG00000102178UBL4A2no signalX153712056153715009-1
ENSG00000071553ATP6AP12no signalX1536569781536648621
ENSG00000013563DNASE1L12no signalX153629579153640449-1
ENSG00000007350TKTL12no signalX1535240241535587001
ENSG00000177854TMEM1872no signalX1532377781532486461
ENSG00000102030NAA102no signalX153194695153200676-1
ENSG000002286162no signalX1528761491528783801
ENSG000002133912no signalX1528719721528723431
ENSG00000264933RN7SL190P2no signalX152163780152164039-1
ENSG00000198883PNMA52no signalX152157368152162671-1
ENSG00000184324CSAG22no signalX1519224451519287381
ENSG000002344542no signalX1518514871518523031
ENSG00000223940KRT8P82no signalX1516480491516494961
ENSG00000147381MAGEA42no signalX1510809811510936421
ENSG00000234696GPR50-AS12no signalX150343664150346308-1
ENSG00000185247MAGEA112no signalX1487698941487989261
ENSG00000123584MAGEA9B2no signalX148663309148669116-1
ENSG00000176289IDSP12no signalX1486065401486075821
ENSG000002647022no signalX1483937631483938451
ENSG00000222313RN7SKP2672no signalX147903688147903972-1
ENSG00000236337FMR1-IT12no signalX1470284611470291031
ENSG000002270832no signalX146981696146982977-1
ENSG000002288552no signalX146673130146673427-1
ENSG00000207641MIR5102no signalX146353853146353926-1
ENSG00000212013MIR509-22no signalX146340278146340368-1
ENSG00000130150MOSPD22no signalX14891563149404491
ENSG00000197582GPX1P12no signalX1339685413397459-1
ENSG00000101916TLR82no signalX12924739129412881
ENSG000002521112no signalX1216643712166520-1
ENSG00000169933FRMPD42no signalX12156585127426421
ENSG000002341292no signalX1086599611129261-1
ENSG000002221332no signalX1018463810184739-1
ENSG000002024692no signalX10029262100293631
ENSG00000225076WWC3-AS12no signalX999288210006694-1
ENSG00000225574DRAXINP12no signalX87515558752502-1
ENSG00000011201KAL12no signalX84969158700227-1
ENSG00000182583VCX2no signalX781030378121841
ENSG00000101846STS2no signalX713749772728511
ENSG000002257222no signalX387109738716021
ENSG00000183943PRKX2no signalX35224113631649-1
ENSG000002302492no signalX30309413031637-1
ENSG000002518482no signalX272994127300211
ENSG00000169093ASMTL2no signalX15220321572655-1
ENSG00000225661RPL14P52no signalX969238970836-1
ENSG000002043682no signalX48072226480774451
ENSG00000252856RNA5SP5032no signalX48065693480658091
ENSG000002302412no signalX4799503647995537-1
ENSG00000126767ELK12no signalX4749492047510003-1
ENSG00000126759CFP2no signalX4748361247489704-1
ENSG00000235636NUS1P12no signalX4737200147372882-1
ENSG00000196741CXorf242no signalX47342970473442071
ENSG00000147124ZNF412no signalX4730527847342345-1
ENSG00000147117ZNF1572no signalX47229982472737041
ENSG00000266158RN7SL785P2no signalX4714021447140462-1
ENSG00000226048YBX1P82no signalX4654420046545142-1
ENSG00000224701MED28P42no signalX4581119745811768-1
ENSG000002699022no signalX4562417545624702-1
ENSG000002295632no signalX45364633454894471
ENSG00000124479NDP2no signalX4380802243832750-1
ENSG00000231750NANOGP102no signalX4326691443267808-1
ENSG000002242942no signalX43036243430858471
ENSG00000212560RNU6-630P2no signalX4199867841998783-1
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