Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

CCRF-CEM - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 1.98
Chromosome Average Copy Number: 1.99

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
71425349351585056382no signal
71585057501591270052no signal
743259171319352no signal
717132330175809792no signal
717581787382907142no signal
738294102383913660loss
738392037384789782no signal
7384792201252517712no signal
71252518241259762992no signal
71259765601420053612no signal
71420095221420473971no signal
71420476491424936510loss
71424996781425348182no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000078399HOXA92no signal72720205427210117-1
ENSG00000122592HOXA72no signal72719333527197555-1
ENSG00000106004HOXA52no signal72718067127183287-1
ENSG00000086300SNX102no signal726331541264139491
ENSG000002664302no signal726099959261000581
ENSG000002273862no signal72558738225590682-1
ENSG000002137982no signal72525178925252584-1
ENSG00000227436FCF1P12no signal723658952236624451
ENSG000002148712no signal723210760232345031
ENSG00000230042AK3P32no signal723168797231694601
ENSG00000183742MACC12no signal72017427820257027-1
ENSG000002430042no signal71995860420180076-1
ENSG000002328212no signal719152097191538941
ENSG000002360392no signal71747410117500296-1
ENSG00000171243SOSTDC12no signal71650110616570205-1
ENSG000002291082no signal715728003157351161
ENSG00000006468ETV12no signal71393085314031050-1
ENSG000002296182no signal713141016137437741
ENSG00000230879RBMX2P42no signal71296217012962545-1
ENSG00000229091HSPA8P82no signal710490938104921531
ENSG000002723282no signal7834337183809731
ENSG000002332642no signal7801994380218591
ENSG000002703142no signal777753747776482-1
ENSG00000219545RPA3-AS12no signal7768034280436891
ENSG00000106399RPA32no signal776761497758238-1
ENSG00000164654MIOS2no signal7760650376485601
ENSG000002367122no signal7733313973335111
ENSG00000226943ALG1L5P2no signal7696343569704661
ENSG000002280102no signal7670360567485321
ENSG00000136247ZDHHC42no signal7661706566290051
ENSG000002313592no signal765304246530729-1
ENSG000002646052no signal7612273661228051
ENSG00000237738RNF216-IT12no signal757020635720092-1
ENSG000002639002no signal755677345567817-1
ENSG00000146587RBAK2no signal7508545251091191
ENSG000002068952no signal748508194850920-1
ENSG00000164916FOXK12no signal7468338848110741
ENSG000002245932no signal7337752133782331
ENSG000002372862no signal7298366929867251
ENSG00000106012IQCE2no signal7259863226543681
ENSG00000106263EIF3B2no signal7239372124203801
ENSG00000225968ELFN12no signal7172775517875901
ENSG00000230487PSMG3-AS12no signal7160970916292621
ENSG00000164853UNCX2no signal7127254312769541
ENSG000002617952no signal7161765164972-1
ENSG000002288512no signal757258848572596341
ENSG000002366922no signal757255599572578471
ENSG00000214668SLC29A4P12no signal75708199257087980-1
ENSG000002252442no signal75700804857012060-1
ENSG000002283032no signal75670663656718389-1
ENSG000002130672no signal756665072566660351
ENSG000002136502no signal75663559956636551-1
ENSG00000207168SNORA152no signal756128163561282951
ENSG00000178665ZNF7132no signal755955169560099181
ENSG000002250182no signal75594443155944717-1
ENSG000002313172no signal75572446155746183-1
ENSG000002520542no signal754933511549337171
ENSG000002711942no signal753383842533844331
ENSG00000227344HAUS6P12no signal753255081532566311
ENSG000002530282no signal75233713352337265-1
ENSG000002270802no signal75145612751456811-1
ENSG000002356202no signal75031438650315218-1
ENSG00000188730VWC22no signal749813257499615461
ENSG000002281732no signal74870017148702901-1
ENSG00000136273HUS12no signal74773532848019178-1
ENSG00000221845C7orf652no signal747694842477012461
ENSG000002238292no signal747009300470670791
ENSG00000239004RNU7-76P2no signal74601497646015037-1
ENSG00000015520NPC1L12no signal74455213444580914-1
ENSG00000106631MYL72no signal74417846344180931-1
ENSG00000078967UBE2D42no signal743966037439957351
ENSG00000002746HECW12no signal743152198436056001
ENSG000002320062no signal74299373443099149-1
ENSG000002566462no signal74294887242971773-1
ENSG00000229161TCP1P12no signal742834505428420931
ENSG00000213721HMGN2P302no signal742152964421532191
ENSG00000226220CICP222no signal73983619239837510-1
ENSG00000233854POU6F2-AS22no signal73902384339053151-1
ENSG00000164556FAM183B2no signal73872494638726637-1
ENSG00000227404KRT8P202no signal738694805386962131
ENSG00000211698TRGV42no signal73839331638394118-1
ENSG00000211695TRGV90loss73835661838358462-1
ENSG00000106483SFRP42no signal73794554338065297-1
ENSG000002001132no signal737459231374593701
ENSG00000213744RPS10P142no signal737415125374156261
ENSG000002711172no signal736186451361876331
ENSG000002260632no signal73529799235299340-1
ENSG00000164532TBX202no signal73524204235293758-1
ENSG00000202431RNU6-438P2no signal73433710834337210-1
ENSG00000164619BMPER2no signal733944523341954841
ENSG000002332192no signal73390811333913843-1
ENSG000002364942no signal73383278033842768-1
ENSG000002290542no signal73307582433075994-1
ENSG00000122642FKBP92no signal732997017330465431
ENSG000002507562no signal732827946328280541
ENSG00000237004ZNRF2P12no signal732768181327686231
ENSG00000226421SLC25A5P52no signal732511125325120211
ENSG00000180347CCDC1292no signal731553704316983341
ENSG000002314182no signal73145425931460900-1
ENSG00000180233ZNRF22no signal730323923304521181
ENSG000002270142no signal730028216300652761
ENSG00000136193SCRN12no signal72995971930029905-1
ENSG00000237065NANOGP42no signal729251918292528301
ENSG00000106069CHN22no signal729161890295539441
ENSG000002335172no signal729026644290285151
ENSG000002725682no signal729019583290529831
ENSG000002252862no signal72865471428655505-1
ENSG00000005073HOXA112no signal72722112927224842-1
ENSG000002571842no signal72720315427219632-1
ENSG000002291102no signal778754055787550661
ENSG00000226978MAGI2-AS22no signal778638304786415931
ENSG00000127947PTPN122no signal777166592772693881
ENSG00000127951FGL22no signal77682268876829143-1
ENSG00000135205CCDC1462no signal776751751769588501
ENSG000002019592no signal776670964766710651
ENSG00000242435UPK3BP12no signal776633979766350911
ENSG000001850402no signal77616301176170884-1
ENSG00000264312RN7SL642P2no signal77520995975210221-1
ENSG00000127957PMS2P32no signal77513225475157478-1
ENSG000002420732no signal77510397375115385-1
ENSG00000178809TRIM732no signal775024337750402791
ENSG000002055062no signal774936533749442191
ENSG000002055082no signal774910311749183801
ENSG000001890112no signal77470242874714647-1
ENSG000002310912no signal77465307974653184-1
ENSG000002614672no signal773400322734030971
ENSG00000009950MLXIPL2no signal77300752473038873-1
ENSG00000188763FZD92no signal772848109728504501
ENSG00000205578POM121B2no signal772707497727164961
ENSG000001999132no signal772509641725097421
ENSG000001743842no signal772507941725150081
ENSG000002018622no signal77245389172453991-1
ENSG00000228769ABCF2P22no signal771568166715691941
ENSG00000265878MIR3914-12no signal77077265870772742-1
ENSG00000158321AUTS22no signal769063905702580541
ENSG000002334232no signal76715604567162016-1
ENSG000002333832no signal76655424466554457-1
ENSG000002302952no signal766345695663479681
ENSG00000154710RABGEF12no signal766147151662764511
ENSG000002268242no signal766119525661348421
ENSG000002325592no signal76601063466057373-1
ENSG000002345002no signal765976543660100531
ENSG000002373102no signal765958693659604611
ENSG00000222364RNU6-96P2no signal765860178658602731
ENSG00000241258CRCP2no signal765579591656195551
ENSG000002493192no signal765552756656172281
ENSG000002055962no signal76553589165536305-1
ENSG000002529972no signal76552122165521305-1
ENSG000002365292no signal765305199653055831
ENSG00000206634SNORA222no signal765220513652206461
ENSG00000232270INTS4L22no signal765112777651806361
ENSG000002381242no signal764927984649283511
ENSG000002329062no signal764820847648220891
ENSG000002254142no signal764721415647217741
ENSG000002070622no signal764530916645310501
ENSG00000198039ZNF2732no signal764330550643913441
ENSG00000173041ZNF6802no signal76398026264023484-1
ENSG00000228653HNRNPCP72no signal763961203639621071
ENSG000002136442no signal763642088636432711
ENSG00000230252MTND2P42no signal76357092563571928-1
ENSG000002347002no signal76356900363570525-1
ENSG000002342342no signal76356820763568864-1
ENSG00000228660VN1R35P2no signal76342380963424501-1
ENSG000002638912no signal763361446633615111
ENSG000002362992no signal76334857863361113-1
ENSG000002254512no signal763336719633377281
ENSG00000223566TNRC18P22no signal76302812163045453-1
ENSG000002238892no signal76285412762854487-1
ENSG00000185037ZNF733P2no signal76275189662764434-1
ENSG000002312322no signal75788215057882507-1
ENSG000002244842no signal75783667857837227-1
ENSG000002321612no signal757830672578308791
ENSG00000182111ZNF7162no signal757509883575332521
ENSG00000077454LRCH42no signal7100169855100183776-1
ENSG000002663722no signal7100081381100081466-1
ENSG00000264758RN7SL161P2no signal71000604521000607251
ENSG00000185955C7orf612no signal7100054238100061894-1
ENSG00000266154MIR46582no signal79975422899754292-1
ENSG00000166526ZNF32no signal79966165699680171-1
ENSG00000166529ZSCAN212no signal799647390996626611
ENSG000002357132no signal799590020995906731
ENSG000002604452no signal799467464994675171
ENSG000002734072no signal799364166993645151
ENSG00000160870CYP3A72no signal79930266099332819-1
ENSG000002244482no signal79923586599236390-1
ENSG00000185467KPNA72no signal79877119798805129-1
ENSG00000207204RNU6-393P2no signal79839234198392447-1
ENSG000002729502no signal797952165979527421
ENSG00000180535BHLHA152no signal797840739978422911
ENSG00000183444OR7E38P2no signal79759540297596386-1
ENSG000002318592no signal797535741975361341
ENSG00000237818RPS3AP292no signal79752765997528427-1
ENSG000002359822no signal797512594975131071
ENSG00000006128TAC12no signal797361220973697841
ENSG000002211922no signal79692082696920908-1
ENSG00000244318RN7SL252P2no signal79656938296569676-1
ENSG000002375512no signal795912669959131161
ENSG00000005981ASB42no signal795107756951695441
ENSG00000105854PON22no signal79503417595064510-1
ENSG000002371602no signal79497803094978222-1
ENSG000002383842no signal794905898949059961
ENSG00000127990SGCE2no signal79421454294285521-1
ENSG00000164692COL1A22no signal794023873940605441
ENSG000002369382no signal79370107193706469-1
ENSG00000213483NDUFAF4P22no signal793474101934746431
ENSG000002377292no signal79329913893299389-1
ENSG00000004948CALCR2no signal79305379993204042-1
ENSG00000188175HEPACAM22no signal79281789992855837-1
ENSG00000206763RNU6-10P2no signal79233102292331128-1
ENSG00000157259GATAD12no signal792076767920881501
ENSG00000001629ANKIB12no signal791875548920306981
ENSG000002007692no signal79183155791831648-1
ENSG00000001630CYP51A12no signal79174146591772266-1
ENSG00000127914AKAP92no signal791570181917399871
ENSG00000157224CLDN122no signal790013035901427161
ENSG000002254982no signal789941810899519061
ENSG000002115182no signal788269835882699411
ENSG00000237709EEF1A1P282no signal788268328882697301
ENSG000002070942no signal78807840788078546-1
ENSG00000006634DBF42no signal787505531875388561
ENSG00000005469CROT2no signal786974997870291111
ENSG000002003972no signal78684792786848028-1
ENSG000002312552no signal78640439786405338-1
ENSG00000198822GRM32no signal786273230864942001
ENSG00000224059HSPA8P162no signal784657144846590081
ENSG00000227982RPL7P302no signal78415743884158146-1
ENSG00000170381SEMA3E2no signal78299322283278326-1
ENSG00000186472PCLO2no signal78238332982792246-1
ENSG00000019991HGF2no signal78132832281399754-1
ENSG000002301962no signal78124020081240642-1
ENSG000002235142no signal780964422809644991
ENSG000002378962no signal780804824808284311
ENSG000002294362no signal78029164780291901-1
ENSG00000214415GNAT32no signal78008798780141336-1
ENSG00000223550SNRPBP12no signal78000687080007151-1
ENSG000002262852no signal77917322779174169-1
ENSG000002220242no signal778982726789837081
ENSG000002712042no signal7130614968130616965-1
ENSG00000199158MIR962no signal7129414532129414609-1
ENSG00000207990MIR1822no signal7129410223129410332-1
ENSG000002733292no signal7129244389129251471-1
ENSG00000240204SMKR12no signal71291423201291527731
ENSG000002387332no signal71287015851287016881
ENSG000002728992no signal71285108211285120981
ENSG00000128596CCDC1362no signal71284308111284621861
ENSG000002414932no signal7128309141128309946-1
ENSG000002715532no signal71283070971283082101
ENSG000002436792no signal71282940231282947761
ENSG000002732702no signal7128164070128171123-1
ENSG00000224940PRRT42no signal7127990379128001739-1
ENSG00000238750RNU7-27P2no signal71279841351279841961
ENSG00000128594LRRC42no signal7127667124127672160-1
ENSG000002241382no signal71269901821269915771
ENSG000002419212no signal71260190241260642391
ENSG000002058982no signal7124800028124800601-1
ENSG00000224897POT1-AS12no signal71245699271248193691
ENSG00000207214RNU6-102P2no signal71242877731242878761
ENSG00000234224TMEM229A2no signal7123670973123673523-1
ENSG00000207338RNU6-296P2no signal7123098042123098148-1
ENSG000002325242no signal71230966831230999101
ENSG000002344182no signal71218564011218584911
ENSG00000106278PTPRZ12no signal71215131431217020901
ENSG00000252704RN7SKP2772no signal71213764971213767791
ENSG00000207090RNU6-517P2no signal7120835002120835111-1
ENSG000002299822no signal7118520157118521342-1
ENSG000002432432no signal7115877983115967950-1
ENSG000002433452no signal71154297831154311031
ENSG000001997642no signal7114847948114848050-1
ENSG000002662292no signal71142699101142700111
ENSG00000202334RNA5SP2382no signal7114253842114253961-1
ENSG000002236462no signal71122624331123481351
ENSG00000198839ZNF2772no signal71118466431119831511
ENSG00000128512DOCK42no signal7111366166111846466-1
ENSG000002212792no signal71105683741105684531
ENSG000002269652no signal7110072296110174811-1
ENSG000002160852no signal7107677291107677381-1
ENSG00000091128LAMB42no signal7107663993107770801-1
ENSG00000105856HBP12no signal71068094061068429741
ENSG00000005249PRKAR2B2no signal71066850941068022561
ENSG000001778202no signal7106300345106301342-1
ENSG00000105835NAMPT2no signal7105888731105926772-1
ENSG00000242562DCAF13P12no signal71057658171057671461
ENSG00000146776ATXN7L12no signal7105245514105517050-1
ENSG00000231167YBX1P22no signal7105222705105223703-1
ENSG000002238862no signal71051706561051711181
ENSG000002714822no signal71048450471048453061
ENSG000002729182no signal7104743285104745930-1
ENSG000002376062no signal71044667831044672431
ENSG00000197258EIF4BP62no signal71043081961043100231
ENSG00000164815ORC52no signal7103766788103848495-1
ENSG00000161057PSMC22no signal71029847011030098421
ENSG000002368482no signal7102792454102792772-1
ENSG00000252643RNU6-1136P2no signal71024750521024751551
ENSG00000233297RASA4DP2no signal7102322283102330916-1
ENSG000002005522no signal71019772811019773821
ENSG00000106436MYL102no signal7101256605101272576-1
ENSG00000106384MOGAT32no signal7100838288100844302-1
ENSG00000169894MUC3A2no signal71005471871006111181
ENSG00000146839ZAN2no signal71003312491003954191
ENSG00000146830GIGYF12no signal7100277130100287071-1
ENSG00000172354GNB22no signal71002711541002767971
ENSG00000133627ACTR3B2no signal71524568341525524631
ENSG000002311392no signal7152287726152288026-1
ENSG00000241735FABP5P32no signal71521339801521402721
ENSG000002048942no signal71520642561520643451
ENSG00000265810MIR39072no signal7151130575151130725-1
ENSG00000082014SMARCD32no signal7150935850150974982-1
ENSG00000183016IQCA1P12no signal7150888067150902582-1
ENSG00000164897TMUB12no signal7150778167150780633-1
ENSG00000164867NOS32no signal71506880831507116761
ENSG00000002933TMEM176A2no signal71504974911505022081
ENSG00000196329GIMAP52no signal71504193411504471211
ENSG00000106560GIMAP22no signal71503827851503907291
ENSG00000133574GIMAP42no signal71502643651502710411
ENSG00000213205STRADBP12no signal7150209647150210927-1
ENSG00000171115GIMAP82no signal71501477181501764801
ENSG00000214022REPIN12no signal71500652781500711331
ENSG00000133619KRBA12no signal71494118721494316641
ENSG00000181220ZNF7462no signal7149169885149194908-1
ENSG000002281512no signal71490952951490985471
ENSG00000170265ZNF2822no signal71488925771489233391
ENSG000001993702no signal71480867411480869501
ENSG000002140352no signal71447070541447080861
ENSG00000196511TPK12no signal7144149034144533488-1
ENSG00000221970OR2A12no signal71440152181440161501
ENSG000002561782no signal71438805481438831731
ENSG00000221989OR2A22no signal71438066071438076571
ENSG00000239967OR2A41P2no signal71437748141437749181
ENSG00000213215OR2F12no signal71436570271436581081
ENSG00000234066TAS2R62P2no signal71431341271431350661
ENSG00000106144CASP22no signal71429853081430047891
ENSG00000159763PIP2no signal71428291701428368391
ENSG00000250606PRSS3P20loss71424780641424824161
ENSG00000243889TRBV8-10loss7142273056142273334-1
ENSG00000211714TRBV7-30loss7142247109142247615-1
ENSG00000211716TRBV90loss7142239537142240058-1
ENSG00000211717TRBV10-10loss7142231573142232090-1
ENSG000002655232no signal7141559618141559669-1
ENSG00000106028SSBP12no signal71414381211414877221
ENSG00000214102WEE22no signal71414081531414310711
ENSG000002049902no signal7141114183141116190-1
ENSG00000090263MRPS332no signal7140705854140715028-1
ENSG00000133597ADCK22no signal71403729531403960611
ENSG00000202472RNA5SP2482no signal7140086581140086707-1
ENSG000002705122no signal71399822651399827201
ENSG00000260231JHDM1D-AS12no signal71398770611398794401
ENSG00000059377TBXAS12no signal71394768501397201251
ENSG000002392542no signal7138857262138859012-1
ENSG000002296772no signal7138734202138734752-1
ENSG00000146858ZC3HAV1L2no signal7138710452138720775-1
ENSG00000105929ATP6V0A42no signal7138391040138484305-1
ENSG00000223721UQCRFS1P22no signal71383863521383878071
ENSG00000157703SVOPL2no signal7138279030138386097-1
ENSG000002132382no signal7137982833137983229-1
ENSG000002014652no signal7137872744137872875-1
ENSG000002391452no signal71378058341378059371
ENSG00000222514RN7SKP2232no signal71377760001377760611
ENSG000002372432no signal71376380941376427121
ENSG000002320532no signal71357776731361221741
ENSG000002247462no signal71356112031356176291
ENSG000002222192no signal7135482754135482857-1
ENSG00000227073SDHDP22no signal71351292091351296731
ENSG00000080802CNOT42no signal7135046547135194875-1
ENSG000002299742no signal7134832797134832916-1
ENSG00000205060SLC35B42no signal7133974084134001803-1
ENSG00000117868ESYT22no signal7158523686158622944-1
ENSG000002252242no signal71569850621569855261
ENSG000002256122no signal71550590091550597621
ENSG000002285212no signal71549958571549968991
ENSG000002178252no signal7154988273154990165-1
ENSG000002333632no signal7153789286153793128-1
ENSG000002701142no signal7153723372153735689-1
ENSG000002334892no signal71531465141531469601
ENSG00000222870RNU6-1328P2no signal794124611941247161
ENSG000002368612no signal793598754936404251
ENSG00000127920GNG112no signal793551011935579221
ENSG000002346952no signal793520225935229131
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