Cell Line Synopsis
Cell Line Overview
Mutations
Copy Number Variation
Gene Expression
RNAi
Compound Sensitivity Profile
Similar Cell Lines

CAL-51 - Copy Number Variation - Cell Line Synopsis

External Data Sources:COSMIC - Cell Lines Project
Genome Average Copy Number: 1.99
Chromosome Average Copy Number: 0.75

Regions

Chromosome Genome Start Genome Stop Copy Number Signal
Y23653348237656502no signal
Y952591596338663no signal
Y964855196961760loss
Y969758797746151no signal
Y864677088332260loss
Y939219695257450loss
Y27690911277181930loss
Y883849688938182no signal
Y15817266159265211no signal
Y24349164245340360loss
Y21413265215523230loss
Y419898942174362no signal
Y28782094287999360loss
Y421769042944500loss
Y590441166292271no signal
Y14369452146238421no signal
Y21159055212118420loss
Y374373938224080loss
Y9845510141051101no signal
Y752606975772732no signal
Y837557686410251no signal
Y431284343650412no signal
Y16032845162221231no signal
Y14628509147490950loss
Y58967865590328092no signal
Y15926943160325240loss
Y977521298451980loss
Y549574458975450loss
Y783333783733840loss
Y382572040703692no signal
Y18292144185445671no signal
Y23766155238591640loss
Y28103112283924782no signal
Y22777463230582020loss
Y889643191310980loss
Y17292042175643541no signal
Y14749689147855702no signal
Y21552665217586621no signal
Y913138593918851no signal
Y663269567897220loss
Y334081234769720loss
Y347717337403142no signal
Y14109585143578030loss
Y17971200181664601no signal
Y18166715182890060loss
Y18546248187307590loss
Y18733884188050721no signal
Y18805381191652550loss
Y19166861192015741no signal
Y19205570195706330loss
Y19571481211560621no signal
Y21213057214107721no signal
Y21769434226704910loss
Y22672031227679631no signal
Y23064207232518111no signal
Y23252409236532430loss
Y23859469243446821no signal
Y24534524263199601no signal
Y26320494276843552no signal
Y27718291280489701no signal
Y28049144281026450loss
Y28392699286453680loss
Y28645789287819301no signal
Y14785989158169470loss
Y16222446168211790loss
Y16824511169439311no signal
Y16944937172903460loss
Y17564711179699260loss
Y265043928145610loss
Y281530333403361no signal
Y407049841815950loss
Y437096245648000loss
Y457756954916451no signal
Y679162172627851no signal
Y726327875256400loss
Y757979977820420loss
Y778215278328871no signal

Genes

Ensembl Gene Gene Name(s) Copy Number Signal Chromosome Start Stop Strand
ENSG00000231436RBMY3AP0lossY94481809458885-1
ENSG00000258992TSPY11no signalY923607693073571
ENSG00000229549TSPY81no signalY919540692184791
ENSG00000232808TTTY201no signalY91674899172441-1
ENSG00000099725PRKY1no signalY714201372495891
ENSG000001733570lossY877426587841141
ENSG00000147753TTTY71no signalY631750963259471
ENSG000002428791no signalY617575161776281
ENSG000002293082no signalY390453839683611
ENSG00000225653RNF19BPY2no signalY36460383647587-1
ENSG00000184895SRY0lossY26548962655740-1
ENSG000002258762no signalY2839049828390720-1
ENSG00000233156HSFY8P2no signalY28157582281583841
ENSG000002693932no signalY2811177628114889-1
ENSG00000237546XKRYP60lossY28089415281002991
ENSG00000227635USP9YP210lossY2807998028082028-1
ENSG00000172288CDY11no signalY27768264277710491
ENSG00000197092GOLGA6L16P2no signalY2764179827648105-1
ENSG00000239304DNM1P482no signalY27632787276334691
ENSG00000228296TTTY4C2no signalY2720923027246039-1
ENSG00000187191DAZ32no signalY2690921626959626-1
ENSG00000232003ZNF736P12Y2no signalY2664641026647652-1
ENSG00000248792LINC00266-2P2no signalY26424828264374931
ENSG00000172352CDY1B1no signalY2619137626194166-1
ENSG00000231540TCEB1P91no signalY2595496825955206-1
ENSG00000236620XKRYP31no signalY2586206925872955-1
ENSG00000205936PPP1R12BP21no signalY25525631255388441
ENSG00000188120DAZ11no signalY2527550225345241-1
ENSG00000215537ZNF736P11Y1no signalY2501269125013903-1
ENSG00000169789PRY1no signalY24636544246607841
ENSG00000229416USP9YP80lossY2383913223843004-1
ENSG00000223637RBMY2EP0lossY2355687723563471-1
ENSG000002282572no signalY2369372523695897-1
ENSG000002269180lossY23473154234807811
ENSG00000224482HSFY4P0lossY2297066222973695-1
ENSG00000225624TBL1YP10lossY22889140229047861
ENSG00000198692EIF1AY1no signalY22737611227550401
ENSG000002601970lossY2185382721856492-1
ENSG00000235479RAB9AP41no signalY20811557208121651
ENSG00000234529GAPDHP190lossY21489455214904591
ENSG00000131007TTTY9B1no signalY2074309220752407-1
ENSG00000230458GPM6BP11no signalY20740303207404461
ENSG00000250951USP9YP11no signalY20702866207060141
ENSG000002515101no signalY20653626207095841
ENSG00000229406OFD1P4Y1no signalY2061503620634023-1
ENSG00000233522FAM224A1no signalY20488139205150961
ENSG00000237616USP9YP321no signalY2010708120109132-1
ENSG00000129873CDY2B1no signalY1998929019992100-1
ENSG000002258961no signalY19838632198389601
ENSG000002520381no signalY1973494119735035-1
ENSG000002662200lossY1636406516364171-1
ENSG000002651971no signalY1839812718398238-1
ENSG000002526940lossY1577984015779936-1
ENSG00000183878UTY0lossY1536025915592553-1
ENSG00000235462TAB3P10lossY1526584215274125-1
ENSG00000233774MED14P10lossY1473091514746333-1
ENSG00000232730FAM8A4P1no signalY14442350144435621
ENSG00000270455PABPC1P51no signalY13491303134933691
ENSG000002356911no signalY992841199288161
ENSG00000251766RNA5SP5181no signalY99280199928137-1
ENSG00000236718RBMY2QP1no signalY98600989871796-1
ENSG00000228890TTTY213no signalY95552629558905-1
ENSG00000147761TTTY7B3no signalY95444339552871-1
ENSG00000236424TSPY101no signalY936548993682911
ENSG00000234110TSPY25P0lossY946179294639611
ENSG000002700731no signalY934520593477841
ENSG00000188656TSPY7P1no signalY921573192184801
ENSG00000232924TCEB1P40lossY906852490688561
ENSG00000224408USP9YP220lossY902130390234121
ENSG000002300252no signalY88397928842136-1
ENSG00000244246ZNF736P8Y0lossY77814637782131-1
ENSG000002282070lossY87692448771317-1
ENSG00000234795RFTN1P10lossY75810267677302-1
ENSG00000232583GPR143P1no signalY69687746974543-1
ENSG000002234222no signalY754694075490691
ENSG00000224953SRIP31no signalY65870036587221-1
ENSG000002358951no signalY63610176364798-1
ENSG00000229643LINC002801no signalY62252606229454-1
ENSG00000252468RNU2-57P1no signalY488711748873071
ENSG00000229518UBE2V1P32no signalY37343473734763-1
ENSG00000216777PRRC2CP10lossY34176933417851-1
ENSG00000233070ZFY-AS11no signalY28348852870667-1
ENSG00000232195TOMM22P20lossY269602326962591
ENSG00000227629SLC25A15P11no signalY2873278928737748-1
ENSG00000235857CTBP2P12no signalY59001391590016351
ENSG00000188399ANKRD36P10lossY28555962285666821
ENSG00000252625RNU1-40P0lossY28075126280752891
ENSG00000172283PRYP42no signalY28121660281342161
ENSG00000225256TRAPPC2P51no signalY27845598278487091
ENSG00000229709USP9YP361no signalY27725937277345911
ENSG00000236379ZNF736P4Y2no signalY27314746273159881
ENSG00000233740CICP22no signalY2642448426427287-1
ENSG00000224827LINC00265-2P2no signalY26422392264231731
ENSG00000244231CSPG4P2Y2no signalY2632958126333378-1
ENSG00000251917RNU1-86P1no signalY2609276526092918-1
ENSG00000223407USP9YP181no signalY2580561325813969-1
ENSG00000225466OFD1P10Y1no signalY25727742257607871
ENSG000002440001no signalY25163210251639681
ENSG00000226906TTTY41no signalY25082602251194311
ENSG00000234131TCEB1P81no signalY2466338924663720-1
ENSG00000225615RBMY2UP1no signalY24344576243498591
ENSG000002379681no signalY24086159240877401
ENSG00000226092RBMY2AP1no signalY2407366824083297-1
ENSG000002516181no signalY24041541240437061
ENSG00000226042CDY10P0lossY2379936123800927-1
ENSG00000234414RBMY1A12no signalY23673258237112121
ENSG000002357190lossY2362727023629049-1
ENSG00000242875RBMY1B2no signalY23673224236876721
ENSG00000237269RBMY2TP0lossY2359258323599131-1
ENSG00000012817KDM5D0lossY2186575121906825-1
ENSG000002690841no signalY2173789521738068-1
ENSG00000176728TTTY141no signalY2103438721239302-1
ENSG00000169953HSFY21no signalY2089332620990548-1
ENSG00000242153OFD1P6Y1no signalY20835919209010831
ENSG00000249606TRAPPC2P71no signalY2081740620818076-1
ENSG00000240438OFD1P5Y1no signalY2074394920790963-1
ENSG00000230377TCEB1P71no signalY2069421220694542-1
ENSG00000252209RNU1-48P1no signalY20648397206485581
ENSG00000232899CDY9P1no signalY2034472120346300-1
ENSG00000252166RNU1-95P1no signalY20278734202788931
ENSG00000226611OFD1P2Y1no signalY2024256720258088-1
ENSG00000233378USP9YP341no signalY20096229201051401
ENSG00000226116USP9YP61no signalY2002457920033510-1
ENSG00000227949CYCSP460lossY1705342717053630-1
ENSG000002235170lossY1638809216389369-1
ENSG00000228411CDY4P0lossY1491390614915763-1
ENSG00000233864TTTY152no signalY14774265148041621
ENSG00000243980RN7SL702P1no signalY14394177143944651
ENSG00000232226ARSFP11no signalY1437302514378737-1
ENSG000002528551no signalY1334055113340633-1
ENSG00000237447CDC27P21no signalY1002798610029907-1
ENSG00000243643TSPY20P1no signalY987380498759841
ENSG00000234803FAM197Y21no signalY93552089364506-1
ENSG000002269751no signalY1000739710007923-1
ENSG000002351931no signalY992563599271951
ENSG00000234950RBMY2OP0lossY978916297970321
ENSG00000229208RBMY2NP0lossY96690279684305-1
ENSG000002283790lossY965092496551221
ENSG00000226223TSPY16P0lossY94778589478325-1
ENSG00000230066FAM197Y31no signalY93348969342768-1
ENSG00000237802FAM197Y61no signalY92257319233636-1
ENSG00000228383FAM197Y71no signalY92054129235047-1
ENSG00000231988OFD1P3Y0lossY889863589080291
ENSG00000233699TTTY181no signalY85514118551919-1
ENSG00000234850MTND2P30lossY824028282407511
ENSG00000252155RNU6-941P1no signalY724671372468201
ENSG00000238073RBMY2HP2no signalY75397847544065-1
ENSG00000233634GOT2P50lossY670574867062931
ENSG00000234583TSPY19P1no signalY61719986173115-1
ENSG000002694641no signalY53066915312605-1
ENSG00000168757TSPY21no signalY611426461170601
ENSG00000225878SERBP1P21no signalY46697264670889-1
ENSG00000237659RNASEH2CP10lossY265786826583691
ENSG00000252948RNU6-1314P0lossY28507136285072391
ENSG00000232914TRAPPC2P40lossY28050665280533971
ENSG00000223406XKRYP51no signalY27898535278990171
ENSG00000223856RAB9AP21no signalY2785605527859704-1
ENSG00000233944LINC00265-3P2no signalY2753930127540203-1
ENSG00000237823CDY19P0lossY2771026927712180-1
ENSG00000223641TTTY17C2no signalY2732979027330920-1
ENSG00000232585OFD1P12Y1no signalY26118927261412281
ENSG00000223362CDY15P1no signalY2600166926003238-1
ENSG00000224866USP9YP251no signalY25880340258823961
ENSG00000228240TTTY17A1no signalY24997731249988621
ENSG00000224873CDY13P1no signalY2466682824667842-1
ENSG00000229553USP9YP171no signalY2419590224204260-1
ENSG00000184991TTTY132no signalY2374548623756552-1
ENSG000002279892no signalY2371773823719956-1
ENSG00000157828RPS4Y20lossY22918050229429181
ENSG00000228764ZNF885P0lossY22551937225586821
ENSG00000215580BCORP11no signalY2161731721665039-1
ENSG00000252766RNU6-255P0lossY2118086921180973-1
ENSG00000217179MTCYBP21no signalY21033988210341581
ENSG00000248573PRYP61no signalY2095259520952937-1
ENSG00000228193TCEB1P141no signalY20949636209499661
ENSG00000172468HSFY11no signalY20708557207508491
ENSG00000249726TUBB1P11no signalY20548860205510371
ENSG00000229465ACTG1P111no signalY20309770203108941
ENSG000002446461no signalY20290496202989131
ENSG00000233120USP9YP151no signalY20278413202795811
ENSG00000225895TRAPPC2P81no signalY20267200202699881
ENSG00000225740TCEB1P61no signalY1994908119949408-1
ENSG00000252012RNA5SP5211no signalY19671654196717691
ENSG000002245180lossY17053626170545951
ENSG000002651611no signalY1394744313947512-1
ENSG000002702421no signalY13551375135527521
ENSG00000259154DUX4L171no signalY13470597134718631
ENSG00000252513RNU1-128P1no signalY1990088319901042-1
ENSG00000224166PRYP11no signalY1984140819856476-1
ENSG00000226353TAF9P11no signalY19740393197412821
ENSG00000238191CLUHP11no signalY1973313919737712-1
ENSG00000224989FAM41AY11no signalY19612838196268981
ENSG00000228518SURF6P10lossY19304706193055321
ENSG00000252323RNU6-184P1no signalY1844816318448269-1
ENSG00000252173RNU6-109P1no signalY18360815183609211
ENSG00000228787NLGN4Y-AS11no signalY1690552216915913-1
ENSG00000129864VCY1no signalY1609765216098393-1
ENSG00000154620TMSB4Y0lossY15815447158179041
ENSG00000215414PSMA6P10lossY15398518153992581
ENSG00000067048DDX3Y0lossY15016019150323901
ENSG00000114374USP9Y0lossY14813160149727641
ENSG00000234385RCC2P11no signalY1390175813903233-1
ENSG00000183704SLC9B1P11no signalY1349624113524717-1
ENSG00000259029DUX4L181no signalY13477233134784991
ENSG000002713651no signalY1326274113262939-1
ENSG000002519661no signalY10033981100340931
ENSG00000226061PCMTD1P11no signalY10011462100118161
ENSG000002314111no signalY1000919910010334-1
ENSG00000252289RNA5SP5191no signalY99304849930602-1
ENSG00000239225TTTY231no signalY974840797495711
ENSG00000231874TSPY18P1no signalY970727397083901
ENSG00000212855TTTY23no signalY957819395960851
ENSG000002326170lossY950283895066191
ENSG00000236786TSPY15P1no signalY938571793882901
ENSG000002255161no signalY92930129344176-1
ENSG00000225560FAM197Y81no signalY91851209193010-1
ENSG00000197038RBMY1A3P1no signalY91487399160483-1
ENSG00000232235CDY3P0lossY90036949005311-1
ENSG00000232419TTTY191no signalY857251385733241
ENSG00000232348LINC002791no signalY850633585128831
ENSG00000216824ZNF736P10Y0lossY82868328287941-1
ENSG00000224634ZNF736P6Y0lossY821897282201841
ENSG00000239893ZNF736P9Y0lossY79369377938764-1
ENSG00000241200ZNF736P7Y0lossY78590287859847-1
ENSG00000229745BPY2DP1no signalY78010387805681-1
ENSG00000225520TTTY162no signalY75673987569288-1
ENSG00000252472RNU6-521P0lossY72910957291199-1
ENSG00000237701ATP5JP10lossY676879467694131
ENSG00000129816TTTY1B1no signalY625847262796051
ENSG00000099721AMELY0lossY67339596742068-1
ENSG000002350941no signalY617408361759611
ENSG00000234830FAM197Y91no signalY61243086131994-1
ENSG000002512751no signalY61098096111670-1
ENSG000002518790lossY574228757423791
ENSG00000235175RPL26P370lossY56613415661778-1
ENSG00000214207KRT18P101no signalY544118654424721
ENSG00000099715PCDH11Y1no signalY486826756102651
ENSG000002184102no signalY37192653720910-1
ENSG00000176679TGIF2LY0lossY344708234480821
ENSG00000223600EEF1A1P411no signalY28631082863314-1
ENSG00000229163NAP1L1P20lossY27970422799161-1
ENSG000002517960lossY28393531283936681
ENSG00000230854USP9YP200lossY28069535280759731
ENSG00000223655RAB9AP30lossY2806447028065042-1
ENSG00000229343CDY22P1no signalY27959160279607131
ENSG00000225326USP9YP191no signalY2789474327896353-1
ENSG00000232614USP9YP91no signalY2787615827881307-1
ENSG00000172294CSPG4P4Y2no signalY27624416276328521
ENSG000002720422no signalY27605054276053291
ENSG00000172297GOLGA2P3Y2no signalY27600708276067191
ENSG00000223636UBE2Q2P5Y2no signalY27577303275834621
ENSG00000233652CICP12no signalY27535139275379581
ENSG00000183795BPY2B2no signalY26753707267853541
ENSG00000235412TTTY4B2no signalY26716349267531721
ENSG00000225491UBE2Q2P4Y2no signalY2637897326385131-1
ENSG00000242425RN7SL818P2no signalY2635710726357382-1
ENSG00000242854DNM1P242no signalY2632546326329652-1
ENSG000002359811no signalY26288505263039901
ENSG00000232205CDY18P1no signalY26250254262521651
ENSG00000231375CDY17P1no signalY2619602526197634-1
ENSG00000227871USP9YP121no signalY2609207426098440-1
ENSG00000231026XKRYP41no signalY2606338826063870-1
ENSG00000252681RNU1-97P1no signalY2588708925887252-1
ENSG00000232424USP9YP291no signalY2588640525892840-1
ENSG000002679351no signalY25847479258505921
ENSG000002366471no signalY25695956256975321
ENSG000002300731no signalY25669468256715161
ENSG000002519251no signalY2556924625569383-1
ENSG00000205944DAZ21no signalY25365594254375031
ENSG00000232764TRIM60P8Y1no signalY25171741251728101
ENSG000002249171no signalY2481676324819006-1
ENSG00000230476OFD1P9Y1no signalY2472713624760228-1
ENSG00000230814USP9YP241no signalY24674428246827861
ENSG00000243040RBMY2FP0lossY24455006244679721
ENSG000002350591no signalY24585087246317391
ENSG00000169800RBMY1F1no signalY2431468924329129-1
ENSG00000131548TTTY6B1no signalY24291113242929781
ENSG000002423932no signalY2367018523672356-1
ENSG000002297251no signalY24017478240196971
ENSG00000169811RBMY1HP2no signalY23655405236638541
ENSG00000169849TSPY14P0lossY23630044236325691
ENSG00000183146CYorf170lossY2354484023548246-1
ENSG00000229551GAPDHP170lossY23023223230242231
ENSG00000232522ZNF886P0lossY2216307122174090-1
ENSG00000237997RCC2P20lossY2214846122149738-1
ENSG00000185275CD24P41no signalY2115435321154595-1
ENSG00000217896ZNF839P11no signalY21147061211482841
ENSG00000238135USP9YP101no signalY20987993209913731
ENSG00000233546PRYP51no signalY20691244206915091
ENSG00000249634USP9YP51no signalY2065280120656181-1
ENSG00000227494USP9YP141no signalY20642973206492861
ENSG00000226362FAM41AY21no signalY2055288020566932-1
ENSG00000252667RNA5SP5231no signalY2050992120510033-1
ENSG00000228945CLUHP21no signalY20442064204466471
ENSG00000237558CDY7P1no signalY20063469200653801
ENSG00000226011OFD1P1Y1no signalY19921687199372091
ENSG00000227166STSP10lossY17659096177052111
ENSG00000224035SFPQP10lossY15195704152077191
ENSG00000206159GYG2P11no signalY1447514714532255-1
ENSG00000224060ARSEP11no signalY14460540144682261
ENSG00000258567DUX4L161no signalY13462594134638571
ENSG00000258991DUX4L191no signalY13488005134892711
ENSG00000251705RNA5-8SP61no signalY10037764100379151
ENSG000002258401no signalY1003611310036711-1
ENSG00000224336FAM197Y11no signalY93742419384693-1
ENSG00000187657TSPY13P1no signalY97432049745748-1
ENSG00000233803TSPY41no signalY917507391778931
ENSG00000226529MTND1P10lossY823970482400711
ENSG00000225809RBMY2KP0lossY81324908145229-1
ENSG00000215603ZNF92P1Y0lossY77217277722917-1
ENSG00000237048TTTY120lossY767296576787241
ENSG000002366902no signalY755855275607191
ENSG00000236435TSPY12P2no signalY75557807557589-1
ENSG00000092377TBL1Y0lossY677872769597241
ENSG00000232620TSPY17P1no signalY638850463889701
ENSG00000185700TTTY8B1no signalY63388146341671-1
ENSG00000237563TTTY21B1no signalY631147563151181
ENSG000002502041no signalY61113366113324-1
ENSG00000237069TTTY23B1no signalY61104876111651-1
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